| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197105522
Identifier: 197105522
GI number: 197105522
Start: 2300669
End: 2301829
Strand: Direct
Name: 197105522
Synonym: PHZ_c2059
Alternate gene names: NA
Gene position: 2300669-2301829 (Clockwise)
Preceding gene: 197105521
Following gene: 197105523
Centisome position: 57.57
GC content: 71.4
Gene sequence:
>1161_bases ATGGCGTTCTGGCCCATGGTCGGGGCCACGGCGGTGACGCTGGTCGCCCTGCTGCTGGAACGGATCCTGCGCCTGCTGGA CCTGCTGTCGGAAAGCAGCGAGCGGTTCACCTTCGTCGCCCAGCTGGCCGTCAACCTCGTGCCGCACTACGTGGGCCTGA CCCTGCCCGCGGCGTTCTTCATCGCCCTGATCATCGTCGTGAACCGGATGAATCAGGCCTCTGAGATCGACGCCCTGCTG GCGGCCGGCGTCTCGCTGACGCGGCTGGCGGCGCCCTATCTGGTGCTGGCGGGGGTTCTCAGCTTCCTGACGCTGATCGT GTTCGGCGCGCTGCAGCCCTACAGCCGCTACGCCTACCGCGCGGTGCTGCACGCGGCCCAGAACGCCGGCTGGAGCGGCC AGGTGCCCGAGGGGACGATCATCGCCCCCAACGACGACCTGATCATGACCACCGACCAGGCCGACGCCGCGGGCCAGCGG CTGACCCGGGTGTTCATCCGCCGCCTGACGCCCGAGGGACGCGAAGAGGTCACCACGGCGGGCGTCGCCGAGCTTCGCCG GACCGCCGACGGTAAGAACGTCACCCTCATGCTGAAGGACGGCCAGCAGCTGCGCTTCAACCGGCGCGGCGAGCCCGAGC TGCTCTCGTTCGAGGACTTCACCATGCAGCTGCCGCTGAGCGGGCCCGCCCGGCTGCTGCGCGCCCGCGGCGGCGACGAG CGCGAGCTCAACCTCTTCGAGCTGGCCAAGAAGGCGAACGATCCCCAGTCGGTGATCCCGCGCGAGACCCTGCTGGCCGA GCTCTACGGGCGCCTGGCGCGGGCGCTGGCCCTGCCGCTGCTGCCGCTGCTGGCCGTGCCGCTGGGCCTGTCGGCCAAGC GCAGCGGCCGCGCGCCGGGGGTGATCGTGGGCGGGATCTTGCTGCTCGCCTTCCACCACCTCATCCAGCTGGGCCAGAGC TTCGCCGAGACGGGCCGCGCGCCGGCCGAGGCGGGCGTCGGGATCCCCTTCGTCGCCTTCGCGGCGATCTGCTTCACCGT CTTCCTCACCAGCCGCAAGCGGCCGGGCGAGACCCCCGTCGGACGGGTGATGGAGCACCTGGCGAACGTCATCGTGCGCG TGCGCAAGCGGGTGAAGCTGCGCCGGAAGGCCCTGCCGTGA
Upstream 100 bases:
>100_bases AGGCCGCGGCCCTGGCCGCCGACTTCGCCGCGCGCTGGCAGGCCTGAAGCGCCCGCGACCCGGGGGGAATGTGAGCCTCA TCGACCGTTACCTTCTCCGG
Downstream 100 bases:
>100_bases GCCTCGGCCTCTACCTCTTCAGGCTCGCCTTCGGCCGCATCCTGGCGGCGCTGGCGGTGCTGGTCGGCATCCTGCAGATC CTCGACCTGCTGGACGTCAC
Product: hypothetical protein
Products: NA
Alternate protein names: Permease; Permease YjgP/YjgQ; Transporter YjgP/YjgQ; Permease YjgP
Number of amino acids: Translated: 386; Mature: 385
Protein sequence:
>386_residues MAFWPMVGATAVTLVALLLERILRLLDLLSESSERFTFVAQLAVNLVPHYVGLTLPAAFFIALIIVVNRMNQASEIDALL AAGVSLTRLAAPYLVLAGVLSFLTLIVFGALQPYSRYAYRAVLHAAQNAGWSGQVPEGTIIAPNDDLIMTTDQADAAGQR LTRVFIRRLTPEGREEVTTAGVAELRRTADGKNVTLMLKDGQQLRFNRRGEPELLSFEDFTMQLPLSGPARLLRARGGDE RELNLFELAKKANDPQSVIPRETLLAELYGRLARALALPLLPLLAVPLGLSAKRSGRAPGVIVGGILLLAFHHLIQLGQS FAETGRAPAEAGVGIPFVAFAAICFTVFLTSRKRPGETPVGRVMEHLANVIVRVRKRVKLRRKALP
Sequences:
>Translated_386_residues MAFWPMVGATAVTLVALLLERILRLLDLLSESSERFTFVAQLAVNLVPHYVGLTLPAAFFIALIIVVNRMNQASEIDALL AAGVSLTRLAAPYLVLAGVLSFLTLIVFGALQPYSRYAYRAVLHAAQNAGWSGQVPEGTIIAPNDDLIMTTDQADAAGQR LTRVFIRRLTPEGREEVTTAGVAELRRTADGKNVTLMLKDGQQLRFNRRGEPELLSFEDFTMQLPLSGPARLLRARGGDE RELNLFELAKKANDPQSVIPRETLLAELYGRLARALALPLLPLLAVPLGLSAKRSGRAPGVIVGGILLLAFHHLIQLGQS FAETGRAPAEAGVGIPFVAFAAICFTVFLTSRKRPGETPVGRVMEHLANVIVRVRKRVKLRRKALP >Mature_385_residues AFWPMVGATAVTLVALLLERILRLLDLLSESSERFTFVAQLAVNLVPHYVGLTLPAAFFIALIIVVNRMNQASEIDALLA AGVSLTRLAAPYLVLAGVLSFLTLIVFGALQPYSRYAYRAVLHAAQNAGWSGQVPEGTIIAPNDDLIMTTDQADAAGQRL TRVFIRRLTPEGREEVTTAGVAELRRTADGKNVTLMLKDGQQLRFNRRGEPELLSFEDFTMQLPLSGPARLLRARGGDER ELNLFELAKKANDPQSVIPRETLLAELYGRLARALALPLLPLLAVPLGLSAKRSGRAPGVIVGGILLLAFHHLIQLGQSF AETGRAPAEAGVGIPFVAFAAICFTVFLTSRKRPGETPVGRVMEHLANVIVRVRKRVKLRRKALP
Specific function: Unknown
COG id: COG0795
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42017; Mature: 41886
Theoretical pI: Translated: 10.78; Mature: 10.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFWPMVGATAVTLVALLLERILRLLDLLSESSERFTFVAQLAVNLVPHYVGLTLPAAFF CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH IALIIVVNRMNQASEIDALLAAGVSLTRLAAPYLVLAGVLSFLTLIVFGALQPYSRYAYR HHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH AVLHAAQNAGWSGQVPEGTIIAPNDDLIMTTDQADAAGQRLTRVFIRRLTPEGREEVTTA HHHHHHHCCCCCCCCCCCEEECCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCHHHHHHH GVAELRRTADGKNVTLMLKDGQQLRFNRRGEPELLSFEDFTMQLPLSGPARLLRARGGDE HHHHHHHHCCCCCEEEEEECCCHHCCCCCCCCCEEEECCCEEECCCCCHHHHHHHCCCCC RELNLFELAKKANDPQSVIPRETLLAELYGRLARALALPLLPLLAVPLGLSAKRSGRAPG CCHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC VIVGGILLLAFHHLIQLGQSFAETGRAPAEAGVGIPFVAFAAICFTVFLTSRKRPGETPV HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCH GRVMEHLANVIVRVRKRVKLRRKALP HHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AFWPMVGATAVTLVALLLERILRLLDLLSESSERFTFVAQLAVNLVPHYVGLTLPAAFF CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH IALIIVVNRMNQASEIDALLAAGVSLTRLAAPYLVLAGVLSFLTLIVFGALQPYSRYAYR HHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH AVLHAAQNAGWSGQVPEGTIIAPNDDLIMTTDQADAAGQRLTRVFIRRLTPEGREEVTTA HHHHHHHCCCCCCCCCCCEEECCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCHHHHHHH GVAELRRTADGKNVTLMLKDGQQLRFNRRGEPELLSFEDFTMQLPLSGPARLLRARGGDE HHHHHHHHCCCCCEEEEEECCCHHCCCCCCCCCEEEECCCEEECCCCCHHHHHHHCCCCC RELNLFELAKKANDPQSVIPRETLLAELYGRLARALALPLLPLLAVPLGLSAKRSGRAPG CCHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC VIVGGILLLAFHHLIQLGQSFAETGRAPAEAGVGIPFVAFAAICFTVFLTSRKRPGETPV HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCH GRVMEHLANVIVRVRKRVKLRRKALP HHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA