| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is kbl [C]
Identifier: 197105516
GI number: 197105516
Start: 2294971
End: 2296188
Strand: Direct
Name: kbl [C]
Synonym: PHZ_c2053
Alternate gene names: 197105516
Gene position: 2294971-2296188 (Clockwise)
Preceding gene: 197105515
Following gene: 197105520
Centisome position: 57.43
GC content: 70.77
Gene sequence:
>1218_bases ATGGGGCTTCTCGACAAGCACCTGGGCTATCGCGCCCCCCTGGAAGGCATCCGCGCTGCGGGCGCCGACCCGTCCAACGT CCGGTTCGACGCCGTGCTCTCGCCCACTGAGGGCGTGCTGGCCGGCCAACCGGTGATCCTGCTGGGCACCAACAACTATC TCGGGCTGACCTTCGACCCGGCCTGCATCGAGGCCTCGGCCGAGGCGGTGCGCGAATGGGGCACGGGCACGACCGGCTCG CGGTTCGCCAACGGCACCTTCGCCGGCCACACGGCGCTGGAGCAGGCCCTGGCCGGCTTCTACGGCCGCAAGCACGCGAT GGTCTTCACGACCGGCTACCAGGCCAACCTGGGCACGATCTCGGGCCTCGTCGGCCGCGGCGACCATCTGATCCTGGACG CCGACAGCCACGCCTCGATCTATGACGCGGCCAAGCTGTCGGGCGCCGAAGTCATCCGCTTCCGCCACAACGACCCGGAC GACCTGCACAAGCGCCTGCGGCGCCTGGGCGACGCGCCCGGCGGACGGCTGATCGTCGTCGAGGGCATCTACTCGATGAT CGGCGACGTGGCCCCGCTGAAGGAGTTCGTCGACGTCAAGCGCGAGATGGGCGGCCACCTGCTGGTGGACGAGGCCCACT CCATGGGCGTGCTGGGCGAGAAGGGCCGCGGCCTGGCCGAAGCGGCCGGCGTCGAGGACGGCGTCGACTTCATCGTCGGC ACCTTCTCCAAGAGCCTGGGCTCGGTCGGCGGCTTCCTCGTCTCGGACGAGGAGAACTTCGACCTGCTGCGCATCGTCAG CCGGCCCTACATGTTCACCGCCTCGCTGCCGCCGGCGGTGATCGCCTCGACCCTCACCGCCCTGAAGCGGCTGGAAGACG AGCCCGGTCTGCGCGCGCGGCTGTCGGCCAACGCCGACCGGCTCTACGAGGGCCTGCGCGACATGGGCTATGCGGTCGGC CCGCACGCCAGCCCGATCACCGCCGTCGAGATGCCCGACCAGGCCACCGCCGTCGGCATGTGGAACGCGCTGCTGCAGAA CGGCGTCTACCTGAACCTCGCCATCCCGCCGGCCACGCCCGAGAACAAGTCGCTGCTGCGCTCCAGCGTCAGCGCGGCCC ACACGACCGAGCAGATCGACACCGTCCTCGGCGTCTTCGAGCAACTGGGCCAGGAATTCGGCCTGCTGGCCGGCCGCCGC CGCGCCGCCACCGCCTAG
Upstream 100 bases:
>100_bases ATCGATTCGACCTGTCGATCCCGCTCGACCGGCTGGCCACGGTGCAGACCGTCGGCGACCTTTCCGAACTGATCAACACG CTGCGGATGAAGGCTTAAGG
Downstream 100 bases:
>100_bases CCCACGCTAGCCTCGGGGCCGGCGCGCCCGCCGCAGTCGCCACAGCACGCCGGGCGCCGCCAGGATCGGGTGGCGCTCGC GGAACGGCGTGACCTCCAGG
Product: aminotransferase, class II
Products: NA
Alternate protein names: AONS/AKB ligase; 7-keto-8-amino-pelargonic acid synthase; 7-KAP synthase; KAPA synthase; 8-amino-7-ketopelargonate synthase; Alpha-oxoamine synthase; L-alanine--pimeloyl-CoA ligase [H]
Number of amino acids: Translated: 405; Mature: 404
Protein sequence:
>405_residues MGLLDKHLGYRAPLEGIRAAGADPSNVRFDAVLSPTEGVLAGQPVILLGTNNYLGLTFDPACIEASAEAVREWGTGTTGS RFANGTFAGHTALEQALAGFYGRKHAMVFTTGYQANLGTISGLVGRGDHLILDADSHASIYDAAKLSGAEVIRFRHNDPD DLHKRLRRLGDAPGGRLIVVEGIYSMIGDVAPLKEFVDVKREMGGHLLVDEAHSMGVLGEKGRGLAEAAGVEDGVDFIVG TFSKSLGSVGGFLVSDEENFDLLRIVSRPYMFTASLPPAVIASTLTALKRLEDEPGLRARLSANADRLYEGLRDMGYAVG PHASPITAVEMPDQATAVGMWNALLQNGVYLNLAIPPATPENKSLLRSSVSAAHTTEQIDTVLGVFEQLGQEFGLLAGRR RAATA
Sequences:
>Translated_405_residues MGLLDKHLGYRAPLEGIRAAGADPSNVRFDAVLSPTEGVLAGQPVILLGTNNYLGLTFDPACIEASAEAVREWGTGTTGS RFANGTFAGHTALEQALAGFYGRKHAMVFTTGYQANLGTISGLVGRGDHLILDADSHASIYDAAKLSGAEVIRFRHNDPD DLHKRLRRLGDAPGGRLIVVEGIYSMIGDVAPLKEFVDVKREMGGHLLVDEAHSMGVLGEKGRGLAEAAGVEDGVDFIVG TFSKSLGSVGGFLVSDEENFDLLRIVSRPYMFTASLPPAVIASTLTALKRLEDEPGLRARLSANADRLYEGLRDMGYAVG PHASPITAVEMPDQATAVGMWNALLQNGVYLNLAIPPATPENKSLLRSSVSAAHTTEQIDTVLGVFEQLGQEFGLLAGRR RAATA >Mature_404_residues GLLDKHLGYRAPLEGIRAAGADPSNVRFDAVLSPTEGVLAGQPVILLGTNNYLGLTFDPACIEASAEAVREWGTGTTGSR FANGTFAGHTALEQALAGFYGRKHAMVFTTGYQANLGTISGLVGRGDHLILDADSHASIYDAAKLSGAEVIRFRHNDPDD LHKRLRRLGDAPGGRLIVVEGIYSMIGDVAPLKEFVDVKREMGGHLLVDEAHSMGVLGEKGRGLAEAAGVEDGVDFIVGT FSKSLGSVGGFLVSDEENFDLLRIVSRPYMFTASLPPAVIASTLTALKRLEDEPGLRARLSANADRLYEGLRDMGYAVGP HASPITAVEMPDQATAVGMWNALLQNGVYLNLAIPPATPENKSLLRSSVSAAHTTEQIDTVLGVFEQLGQEFGLLAGRRR AATA
Specific function: Catalyzes the decarboxylative condensation of pimeloyl- CoA and L-alanine to produce 8-amino-7-oxononanoate (AON), coenzyme A and/or converts 2-amino-3-ketobutyrate to glycine and acetyl-CoA [H]
COG id: COG0156
COG function: function code H; 7-keto-8-aminopelargonate synthetase and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI7657118, Length=387, Percent_Identity=33.8501291989664, Blast_Score=206, Evalue=3e-53, Organism=Homo sapiens, GI284448556, Length=366, Percent_Identity=33.879781420765, Blast_Score=201, Evalue=1e-51, Organism=Homo sapiens, GI4758668, Length=376, Percent_Identity=34.3085106382979, Blast_Score=192, Evalue=6e-49, Organism=Homo sapiens, GI83977440, Length=350, Percent_Identity=32, Blast_Score=191, Evalue=1e-48, Organism=Homo sapiens, GI83977442, Length=350, Percent_Identity=32, Blast_Score=191, Evalue=1e-48, Organism=Homo sapiens, GI83977444, Length=350, Percent_Identity=32, Blast_Score=191, Evalue=2e-48, Organism=Homo sapiens, GI119220554, Length=381, Percent_Identity=31.758530183727, Blast_Score=176, Evalue=3e-44, Organism=Homo sapiens, GI4502025, Length=367, Percent_Identity=29.700272479564, Blast_Score=159, Evalue=4e-39, Organism=Homo sapiens, GI40316939, Length=367, Percent_Identity=29.700272479564, Blast_Score=159, Evalue=4e-39, Organism=Homo sapiens, GI5454084, Length=376, Percent_Identity=28.1914893617021, Blast_Score=150, Evalue=2e-36, Organism=Escherichia coli, GI1790046, Length=362, Percent_Identity=35.9116022099448, Blast_Score=215, Evalue=4e-57, Organism=Escherichia coli, GI1786993, Length=341, Percent_Identity=32.5513196480938, Blast_Score=178, Evalue=7e-46, Organism=Caenorhabditis elegans, GI71994529, Length=394, Percent_Identity=33.248730964467, Blast_Score=213, Evalue=2e-55, Organism=Caenorhabditis elegans, GI32566772, Length=373, Percent_Identity=31.6353887399464, Blast_Score=184, Evalue=8e-47, Organism=Caenorhabditis elegans, GI17560912, Length=366, Percent_Identity=30.6010928961749, Blast_Score=157, Evalue=1e-38, Organism=Caenorhabditis elegans, GI17560914, Length=366, Percent_Identity=30.6010928961749, Blast_Score=156, Evalue=1e-38, Organism=Caenorhabditis elegans, GI71982617, Length=285, Percent_Identity=27.0175438596491, Blast_Score=117, Evalue=1e-26, Organism=Caenorhabditis elegans, GI71982625, Length=285, Percent_Identity=27.0175438596491, Blast_Score=117, Evalue=1e-26, Organism=Saccharomyces cerevisiae, GI6320267, Length=372, Percent_Identity=31.7204301075269, Blast_Score=173, Evalue=4e-44, Organism=Saccharomyces cerevisiae, GI6320438, Length=380, Percent_Identity=26.8421052631579, Blast_Score=138, Evalue=2e-33, Organism=Saccharomyces cerevisiae, GI6323954, Length=259, Percent_Identity=31.6602316602317, Blast_Score=127, Evalue=2e-30, Organism=Drosophila melanogaster, GI24662918, Length=386, Percent_Identity=32.1243523316062, Blast_Score=208, Evalue=4e-54, Organism=Drosophila melanogaster, GI17137420, Length=354, Percent_Identity=30.5084745762712, Blast_Score=170, Evalue=1e-42, Organism=Drosophila melanogaster, GI17136286, Length=371, Percent_Identity=31.5363881401617, Blast_Score=163, Evalue=2e-40, Organism=Drosophila melanogaster, GI24653280, Length=378, Percent_Identity=28.3068783068783, Blast_Score=152, Evalue=3e-37, Organism=Drosophila melanogaster, GI24653276, Length=378, Percent_Identity=28.3068783068783, Blast_Score=152, Evalue=3e-37, Organism=Drosophila melanogaster, GI24653278, Length=378, Percent_Identity=28.3068783068783, Blast_Score=152, Evalue=3e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001917 - InterPro: IPR004839 - InterPro: IPR004723 - InterPro: IPR010962 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: =2.3.1.29; =2.3.1.47 [H]
Molecular weight: Translated: 42934; Mature: 42803
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: PS00599 AA_TRANSFER_CLASS_2 ; PS00761 SPASE_I_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLLDKHLGYRAPLEGIRAAGADPSNVRFDAVLSPTEGVLAGQPVILLGTNNYLGLTFDP CCCCHHHCCCCCCHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCEEEEECCCEEEEEECH ACIEASAEAVREWGTGTTGSRFANGTFAGHTALEQALAGFYGRKHAMVFTTGYQANLGTI HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHH SGLVGRGDHLILDADSHASIYDAAKLSGAEVIRFRHNDPDDLHKRLRRLGDAPGGRLIVV HHHHCCCCEEEEECCCCCCHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCCCCEEEEH EGIYSMIGDVAPLKEFVDVKREMGGHLLVDEAHSMGVLGEKGRGLAEAAGVEDGVDFIVG HHHHHHHCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHCCCCCCHHHHHH TFSKSLGSVGGFLVSDEENFDLLRIVSRPYMFTASLPPAVIASTLTALKRLEDEPGLRAR HHHHHHHCCCCEEEECCCCCHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCEEE LSANADRLYEGLRDMGYAVGPHASPITAVEMPDQATAVGMWNALLQNGVYLNLAIPPATP ECCCHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCEEEEEEECCCCC ENKSLLRSSVSAAHTTEQIDTVLGVFEQLGQEFGLLAGRRRAATA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCC >Mature Secondary Structure GLLDKHLGYRAPLEGIRAAGADPSNVRFDAVLSPTEGVLAGQPVILLGTNNYLGLTFDP CCCHHHCCCCCCHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCEEEEECCCEEEEEECH ACIEASAEAVREWGTGTTGSRFANGTFAGHTALEQALAGFYGRKHAMVFTTGYQANLGTI HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHH SGLVGRGDHLILDADSHASIYDAAKLSGAEVIRFRHNDPDDLHKRLRRLGDAPGGRLIVV HHHHCCCCEEEEECCCCCCHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCCCCEEEEH EGIYSMIGDVAPLKEFVDVKREMGGHLLVDEAHSMGVLGEKGRGLAEAAGVEDGVDFIVG HHHHHHHCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHCCCCCCHHHHHH TFSKSLGSVGGFLVSDEENFDLLRIVSRPYMFTASLPPAVIASTLTALKRLEDEPGLRAR HHHHHHHCCCCEEEECCCCCHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCEEE LSANADRLYEGLRDMGYAVGPHASPITAVEMPDQATAVGMWNALLQNGVYLNLAIPPATP ECCCHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCEEEEEEECCCCC ENKSLLRSSVSAAHTTEQIDTVLGVFEQLGQEFGLLAGRRRAATA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA