| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is mycA [H]
Identifier: 197105513
GI number: 197105513
Start: 2291990
End: 2293681
Strand: Direct
Name: mycA [H]
Synonym: PHZ_c2050
Alternate gene names: 197105513
Gene position: 2291990-2293681 (Clockwise)
Preceding gene: 197105512
Following gene: 197105514
Centisome position: 57.35
GC content: 74.88
Gene sequence:
>1692_bases TTGACCCCTACCCCCACCGCTCCCGACCGGCCCTTCCGACTGGGCGGGTTCGCCACCCTGACCGAGGCGCTGGACTTCGC CGCCCAGGGGCCCACGGGCGTGAACCTCTACGGCCTGCGCGGCGAGCTGGTGCTCGCCCTGTCCTACGCCGAGCTGCGCG AGCGGGCCCGCGCCCTGGCCGCGCGCATCCTGGCGGCCGGGATCCGGCCGTTCGACCGCGTGGGCCTCGTCGCCGAGACC GACGCCGACTTCGTGGTCGCCTTCTTCGCCTGCCAGCACGCCCGGGTGACGCCCGCGCCGCTGGGCGGCCGCGAGGCCTA TGTGGAGCAGATCGGCCGGATGCTGGGCTCGGCGCAGGCCTCGGCCGTGTTCGGCCCCGAGGCCCTGATCCCGTGGCTGC AGGAGGCGGCGCAGGCCGCCGGCGTGAGGCTCGCGGCCCGCGTCCAGGACCTGCCCGAGGCGCCCGCCGCCGACCTGCCC GCGCCGACGCCGGACGATCCCTGCTACGTGCAGTTCTCCTCGGGCAGCACGCGGCACCCGACGGGCGTCCTCTGCACCCA CAGCGCCTTGATGGCCAACACCACCGCGATCACCCGCGACGGGCTGAAGGTGGTCCCGGCCGACCGGGCGTTCTCGTGGC TGCCGCTCTATCACGACATGGGCCTGGTGGGCTTCCTGATGGCCCCGCTGGCCAGCCAGATGACCGTGGACCTGATGCCC ACGGGCGCCTTCGTGCGCCGGCCGCTGCTGTGGCTGGACCTGATGTCGAAGAACCGGGCGACGATCTCGTACAGCCCGAC CTTCGGCTACGAGCTGTGCGCCCGCCGCGGCGACGGCACGCGCGAGGGGCTGGACCTGTCGGCCTGGCGGATCGCCGGCT GCGGCGGCGACATGGTGCGGCCGGGCCCGCTGATGGCCTTCGCCGAGACGTTCGCGCCCGCCGGCTTCTCCCCCACGGCC TTCGTCGCCAGCTACGGCATGGCCGAGGCGACGCTGGCGCTGACCATGGCGCCGCTGGGCCAGGGACTGCGGTTCGAGAC CGTCGACGTCGACCGGATGGAGCGCGACGGCGTGGTCGTCGGCGGCCGGGAAGGCCGCAGCCGGGCCTTCGTCCGCTGCG GGCCGGTGCTGCCCGGCCACGAGCTGGAGGTCCGCGACGAGGCGGGCGCCGCCCTGCCCGAGCTGAAGGTCGGCCGGGTG TTCGTGCGGGGCCCCAGCCTGATGCGCGGCTATTTCGGCGAGCCCGAGGCCTCGGCCAAGGTGCTGGGGCCGGACGGCTG GCTCGACACCGGCGACCTGGGCTTCCTGGTCGAGGGCGAGATCGTGCCGACGGGCCGCGCCAAGGACCTGATCCTGCTGA ACGGCCGGAACGTCTGGCCGCAGGACCTGGAATGGTCCGCCGAGAGCGAGATCGGCAAGCTGCGCAGCGGCGACGTGGCC GCGTTCTCGGTCGACCGCGACGAGGGCGAGCAGCTGGTCGTGCTGGTGCAGGCGCGCACCAGCGATCCCGAGGCGCGCCG GGCGCTGGCCGACGACGTCGCCGCCCTGCTCCGGGCCCGGCACGGCGTGGAGGCCCACGTGGAGCTGGTGGGGGCGCACG CCCTGCCGCAGACCTCGTCGGGCAAGCTCAGCCGGTCCAAGGCCAAGGCGCTGTACCTGGCGGGCGCCTTCCGGGCGGAG GAGCCGGCCTGA
Upstream 100 bases:
>100_bases TGGCCCTGGGCCTGCTCGGGTTCATCCTGAGGGAGAACGGGACCCGGCGCCGGGAGACGCCGCCCCCCTCCGGTTCCGAC GACAGTCTGAAAGGCGAAGC
Downstream 100 bases:
>100_bases CGCGGCTCGCCGCCGTCACCGGCGCCACCGGCTTCCTCGGCCGCCGGATCGTCCGCGCGCTGGCCGAGGACGGCTGGCGC GTGCGCATCCTGGCGCGGCG
Product: acyl-CoA synthetase
Products: NA
Alternate protein names: Glutamate-1-semialdehyde aminotransferase; GSA-AT; ATP-dependent asparagine adenylase 1; AsnA 1; Asparagine activase 1 [H]
Number of amino acids: Translated: 563; Mature: 562
Protein sequence:
>563_residues MTPTPTAPDRPFRLGGFATLTEALDFAAQGPTGVNLYGLRGELVLALSYAELRERARALAARILAAGIRPFDRVGLVAET DADFVVAFFACQHARVTPAPLGGREAYVEQIGRMLGSAQASAVFGPEALIPWLQEAAQAAGVRLAARVQDLPEAPAADLP APTPDDPCYVQFSSGSTRHPTGVLCTHSALMANTTAITRDGLKVVPADRAFSWLPLYHDMGLVGFLMAPLASQMTVDLMP TGAFVRRPLLWLDLMSKNRATISYSPTFGYELCARRGDGTREGLDLSAWRIAGCGGDMVRPGPLMAFAETFAPAGFSPTA FVASYGMAEATLALTMAPLGQGLRFETVDVDRMERDGVVVGGREGRSRAFVRCGPVLPGHELEVRDEAGAALPELKVGRV FVRGPSLMRGYFGEPEASAKVLGPDGWLDTGDLGFLVEGEIVPTGRAKDLILLNGRNVWPQDLEWSAESEIGKLRSGDVA AFSVDRDEGEQLVVLVQARTSDPEARRALADDVAALLRARHGVEAHVELVGAHALPQTSSGKLSRSKAKALYLAGAFRAE EPA
Sequences:
>Translated_563_residues MTPTPTAPDRPFRLGGFATLTEALDFAAQGPTGVNLYGLRGELVLALSYAELRERARALAARILAAGIRPFDRVGLVAET DADFVVAFFACQHARVTPAPLGGREAYVEQIGRMLGSAQASAVFGPEALIPWLQEAAQAAGVRLAARVQDLPEAPAADLP APTPDDPCYVQFSSGSTRHPTGVLCTHSALMANTTAITRDGLKVVPADRAFSWLPLYHDMGLVGFLMAPLASQMTVDLMP TGAFVRRPLLWLDLMSKNRATISYSPTFGYELCARRGDGTREGLDLSAWRIAGCGGDMVRPGPLMAFAETFAPAGFSPTA FVASYGMAEATLALTMAPLGQGLRFETVDVDRMERDGVVVGGREGRSRAFVRCGPVLPGHELEVRDEAGAALPELKVGRV FVRGPSLMRGYFGEPEASAKVLGPDGWLDTGDLGFLVEGEIVPTGRAKDLILLNGRNVWPQDLEWSAESEIGKLRSGDVA AFSVDRDEGEQLVVLVQARTSDPEARRALADDVAALLRARHGVEAHVELVGAHALPQTSSGKLSRSKAKALYLAGAFRAE EPA >Mature_562_residues TPTPTAPDRPFRLGGFATLTEALDFAAQGPTGVNLYGLRGELVLALSYAELRERARALAARILAAGIRPFDRVGLVAETD ADFVVAFFACQHARVTPAPLGGREAYVEQIGRMLGSAQASAVFGPEALIPWLQEAAQAAGVRLAARVQDLPEAPAADLPA PTPDDPCYVQFSSGSTRHPTGVLCTHSALMANTTAITRDGLKVVPADRAFSWLPLYHDMGLVGFLMAPLASQMTVDLMPT GAFVRRPLLWLDLMSKNRATISYSPTFGYELCARRGDGTREGLDLSAWRIAGCGGDMVRPGPLMAFAETFAPAGFSPTAF VASYGMAEATLALTMAPLGQGLRFETVDVDRMERDGVVVGGREGRSRAFVRCGPVLPGHELEVRDEAGAALPELKVGRVF VRGPSLMRGYFGEPEASAKVLGPDGWLDTGDLGFLVEGEIVPTGRAKDLILLNGRNVWPQDLEWSAESEIGKLRSGDVAA FSVDRDEGEQLVVLVQARTSDPEARRALADDVAALLRARHGVEAHVELVGAHALPQTSSGKLSRSKAKALYLAGAFRAEE PA
Specific function: This protein is a multifunctional enzyme, able to activate a long chain fatty acid and link it with the amino acid Asn as part of the synthesis of mycosubtilin. The activation sites consist of individual domains [H]
COG id: COG0318
COG function: function code IQ; Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 4 acyl carrier domains [H]
Homologues:
Organism=Homo sapiens, GI44888818, Length=467, Percent_Identity=26.5524625267666, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI55749758, Length=573, Percent_Identity=23.9092495636998, Blast_Score=84, Evalue=3e-16, Organism=Homo sapiens, GI156151445, Length=562, Percent_Identity=22.0640569395018, Blast_Score=84, Evalue=3e-16, Organism=Homo sapiens, GI45827692, Length=475, Percent_Identity=22.5263157894737, Blast_Score=75, Evalue=2e-13, Organism=Homo sapiens, GI225735629, Length=475, Percent_Identity=22.5263157894737, Blast_Score=74, Evalue=3e-13, Organism=Homo sapiens, GI225735625, Length=592, Percent_Identity=23.6486486486486, Blast_Score=67, Evalue=5e-11, Organism=Escherichia coli, GI145693145, Length=536, Percent_Identity=25.7462686567164, Blast_Score=94, Evalue=2e-20, Organism=Escherichia coli, GI221142682, Length=202, Percent_Identity=30.1980198019802, Blast_Score=70, Evalue=5e-13, Organism=Caenorhabditis elegans, GI17560308, Length=558, Percent_Identity=23.4767025089606, Blast_Score=98, Evalue=1e-20, Organism=Caenorhabditis elegans, GI17531443, Length=473, Percent_Identity=24.3128964059197, Blast_Score=87, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17559526, Length=546, Percent_Identity=22.8937728937729, Blast_Score=77, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17557194, Length=568, Percent_Identity=22.3591549295775, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI24581924, Length=568, Percent_Identity=24.2957746478873, Blast_Score=90, Evalue=3e-18, Organism=Drosophila melanogaster, GI19922652, Length=426, Percent_Identity=24.8826291079812, Blast_Score=76, Evalue=8e-14, Organism=Drosophila melanogaster, GI24653035, Length=181, Percent_Identity=27.0718232044199, Blast_Score=70, Evalue=4e-12, Organism=Drosophila melanogaster, GI21356947, Length=192, Percent_Identity=28.125, Blast_Score=69, Evalue=1e-11, Organism=Drosophila melanogaster, GI161076582, Length=180, Percent_Identity=27.2222222222222, Blast_Score=67, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010071 - InterPro: IPR009081 - InterPro: IPR005814 - InterPro: IPR020845 - InterPro: IPR000873 - InterPro: IPR023213 - InterPro: IPR001242 - InterPro: IPR018201 - InterPro: IPR014031 - InterPro: IPR014030 - InterPro: IPR006163 - InterPro: IPR020806 - InterPro: IPR006162 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 - InterPro: IPR016039 - InterPro: IPR016038 [H]
Pfam domain/function: PF00202 Aminotran_3; PF00501 AMP-binding; PF00668 Condensation; PF00109 ketoacyl-synt; PF02801 Ketoacyl-synt_C; PF00550 PP-binding [H]
EC number: NA
Molecular weight: Translated: 59986; Mature: 59855
Theoretical pI: Translated: 5.28; Mature: 5.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPTPTAPDRPFRLGGFATLTEALDFAAQGPTGVNLYGLRGELVLALSYAELRERARALA CCCCCCCCCCCEECCCHHHHHHHHHHHCCCCCCCEEEECCCEEEEEEEHHHHHHHHHHHH ARILAAGIRPFDRVGLVAETDADFVVAFFACQHARVTPAPLGGREAYVEQIGRMLGSAQA HHHHHHCCCCHHHCCEEEECCCCCEEEEHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCC SAVFGPEALIPWLQEAAQAAGVRLAARVQDLPEAPAADLPAPTPDDPCYVQFSSGSTRHP CEECCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCC TGVLCTHSALMANTTAITRDGLKVVPADRAFSWLPLYHDMGLVGFLMAPLASQMTVDLMP CCEEEECHHHHHCCCEEECCCCEEEECCCCCEEEHHHHHHHHHHHHHHHHHHCEEEEEEC TGAFVRRPLLWLDLMSKNRATISYSPTFGYELCARRGDGTREGLDLSAWRIAGCGGDMVR CCHHHHCHHHHHHHHCCCCEEEEECCCCCHHHHHCCCCCCCCCCCCCEEEEECCCCCCCC PGPLMAFAETFAPAGFSPTAFVASYGMAEATLALTMAPLGQGLRFETVDVDRMERDGVVV CCCHHHHHHHHCCCCCCHHHHHHHCCCHHHHHEEEEHHCCCCCEEEEECHHHHCCCCEEE GGREGRSRAFVRCGPVLPGHELEVRDEAGAALPELKVGRVFVRGPSLMRGYFGEPEASAK ECCCCCCCEEEEECCCCCCCCEEECCCCCCCCCCCEECEEEEECCHHHHCCCCCCCCCCE VLGPDGWLDTGDLGFLVEGEIVPTGRAKDLILLNGRNVWPQDLEWSAESEIGKLRSGDVA EECCCCCCCCCCCCEEEECEEECCCCCCCEEEECCCCCCCCCCCCCCHHHHHCCCCCCEE AFSVDRDEGEQLVVLVQARTSDPEARRALADDVAALLRARHGVEAHVELVGAHALPQTSS EEEECCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCC GKLSRSKAKALYLAGAFRAEEPA CCCCHHHCCEEEEEECCCCCCCC >Mature Secondary Structure TPTPTAPDRPFRLGGFATLTEALDFAAQGPTGVNLYGLRGELVLALSYAELRERARALA CCCCCCCCCCEECCCHHHHHHHHHHHCCCCCCCEEEECCCEEEEEEEHHHHHHHHHHHH ARILAAGIRPFDRVGLVAETDADFVVAFFACQHARVTPAPLGGREAYVEQIGRMLGSAQA HHHHHHCCCCHHHCCEEEECCCCCEEEEHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCC SAVFGPEALIPWLQEAAQAAGVRLAARVQDLPEAPAADLPAPTPDDPCYVQFSSGSTRHP CEECCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCC TGVLCTHSALMANTTAITRDGLKVVPADRAFSWLPLYHDMGLVGFLMAPLASQMTVDLMP CCEEEECHHHHHCCCEEECCCCEEEECCCCCEEEHHHHHHHHHHHHHHHHHHCEEEEEEC TGAFVRRPLLWLDLMSKNRATISYSPTFGYELCARRGDGTREGLDLSAWRIAGCGGDMVR CCHHHHCHHHHHHHHCCCCEEEEECCCCCHHHHHCCCCCCCCCCCCCEEEEECCCCCCCC PGPLMAFAETFAPAGFSPTAFVASYGMAEATLALTMAPLGQGLRFETVDVDRMERDGVVV CCCHHHHHHHHCCCCCCHHHHHHHCCCHHHHHEEEEHHCCCCCEEEEECHHHHCCCCEEE GGREGRSRAFVRCGPVLPGHELEVRDEAGAALPELKVGRVFVRGPSLMRGYFGEPEASAK ECCCCCCCEEEEECCCCCCCCEEECCCCCCCCCCCEECEEEEECCHHHHCCCCCCCCCCE VLGPDGWLDTGDLGFLVEGEIVPTGRAKDLILLNGRNVWPQDLEWSAESEIGKLRSGDVA EECCCCCCCCCCCCEEEECEEECCCCCCCEEEECCCCCCCCCCCCCCHHHHHCCCCCCEE AFSVDRDEGEQLVVLVQARTSDPEARRALADDVAALLRARHGVEAHVELVGAHALPQTSS EEEECCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCC GKLSRSKAKALYLAGAFRAEEPA CCCCHHHCCEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10557314 [H]