Definition Phenylobacterium zucineum HLK1, complete genome.
Accession NC_011144
Length 3,996,255

Click here to switch to the map view.

The map label for this gene is 197105495

Identifier: 197105495

GI number: 197105495

Start: 2276064

End: 2277170

Strand: Direct

Name: 197105495

Synonym: PHZ_c2032

Alternate gene names: NA

Gene position: 2276064-2277170 (Clockwise)

Preceding gene: 197105494

Following gene: 197105500

Centisome position: 56.95

GC content: 75.88

Gene sequence:

>1107_bases
ATGCCGCTTTCCCCCGACGCCCCCCGCAGGCCGCTTCGGCCCCGCCGCCGCGCCCCGCCCCCGCCGCCGGGGGCCGCCGC
CGATCCCGCCGGCTTCCCGGGCGTGCGGCTGTCGCTGGTGGACGACCTGGAGGCCGCGGCCCGCTTCTTCCAGCTCTCGC
GCAACGGCGCCGGCCATGCCGCGGACGCGCCGATCCAGGTGCTGGCGCTCTCGGGCGGCGGCGCGGGCGGGGCGTTCGGC
GCCGGAGCGCTGGTGGGCCTGACCCGCTCGGGCGAGCGGCCGACCTTCGACCTCGTGACGGGGGTCAGCACCGGGGCACT
GATCGCGCCCTTCGCCTTCCTCGGCCCCGACTGGGACGCGCGGCTGGCGGACGCCTACACCGGCGGATACGCGGCCGAGA
TGCTGGGGCTGGCCGCCGTCCGGCCCGGCCCCAGCCTCTATCCGGCCGAGCGGCTGGCGGGCCTGGTCGCCCGCTACGTG
GACGAGGCGCTGCTGGCGGCGGTGGCCGAGGCCCACCGCGGCGGCCGGCGGCTGCTGGCGGCCACGGCGAACCTGGACGC
CCAGACGACCTGCATCTGGGACCTGGGCGCCATCGCCGCCCGCGGCGGGCCCGAGGCGCTGGCCCTGTTCGCCGATGTGC
TGGTGGCCTCGGCCAGCGTGCCCGGCGTCTTCCCGCCCAAGCTGATCCGGGTGGAGAGCGGCGGCGAGACCTATGAGGAG
ATGCACGTCGACGGCGGGGCGATCAGCCCCCTCTTCGTGGTCCCCGAGCCGCTGATCCTGAGGAAGGCGCAGAACCGTCC
CCTGGCCCGGGCCGAGGTCTATGTGCTGATCAACACCGCCCTGGATCCCTCCCCCCGGCCCACGCCGCTGGGGGTGGTGC
CGGTGCTGGTGCGCAGCTTCGAGCTGATGCTGCGCTCGACCTATCGCGGGGCGCTGCGCTCGGTGGCCGCGTTCTGCGAG
CTGAACGGCTTTCTCCTGCACAGCGCCTGGATCCCGGCCGACTGGGACGGGGCCAACATGCTGCGCTTCGACCGCGAGGC
GATGTCGCGGATGTTCGCCCACGGCGCGGAGATGGCGCAGCAGGGCCGCCTCTGGCGGGAGGACTAG

Upstream 100 bases:

>100_bases
CGTCGAGGCCTACGACGAGGCCGTCGCCGAGGTGCTGGGCGAGATCACGGCCTGGACCAACGGGCAGGTCTCGCCGGCCG
CCTGACGCCCGGACCCGCCG

Downstream 100 bases:

>100_bases
GGCGGGCTAGCCCTCGATGCCGGCCAGGCGCTTGGCGGCCGTGACGGTGTTCTGCAGCAGGCAGGCGACGGTCATCAGGC
CGACGCCGCCGGGGACGGGG

Product: hypothetical protein

Products: NA

Alternate protein names: Lipoprotein; Patatin-Like Phospholipase Domain-Containing Protein; Phospholipase Patatin Family; Lipid Acyl Hydrolase Patatin-Like Domain; Patatin-Like Domain; Alpha/Beta Superfamily Hydrolase

Number of amino acids: Translated: 368; Mature: 367

Protein sequence:

>368_residues
MPLSPDAPRRPLRPRRRAPPPPPGAAADPAGFPGVRLSLVDDLEAAARFFQLSRNGAGHAADAPIQVLALSGGGAGGAFG
AGALVGLTRSGERPTFDLVTGVSTGALIAPFAFLGPDWDARLADAYTGGYAAEMLGLAAVRPGPSLYPAERLAGLVARYV
DEALLAAVAEAHRGGRRLLAATANLDAQTTCIWDLGAIAARGGPEALALFADVLVASASVPGVFPPKLIRVESGGETYEE
MHVDGGAISPLFVVPEPLILRKAQNRPLARAEVYVLINTALDPSPRPTPLGVVPVLVRSFELMLRSTYRGALRSVAAFCE
LNGFLLHSAWIPADWDGANMLRFDREAMSRMFAHGAEMAQQGRLWRED

Sequences:

>Translated_368_residues
MPLSPDAPRRPLRPRRRAPPPPPGAAADPAGFPGVRLSLVDDLEAAARFFQLSRNGAGHAADAPIQVLALSGGGAGGAFG
AGALVGLTRSGERPTFDLVTGVSTGALIAPFAFLGPDWDARLADAYTGGYAAEMLGLAAVRPGPSLYPAERLAGLVARYV
DEALLAAVAEAHRGGRRLLAATANLDAQTTCIWDLGAIAARGGPEALALFADVLVASASVPGVFPPKLIRVESGGETYEE
MHVDGGAISPLFVVPEPLILRKAQNRPLARAEVYVLINTALDPSPRPTPLGVVPVLVRSFELMLRSTYRGALRSVAAFCE
LNGFLLHSAWIPADWDGANMLRFDREAMSRMFAHGAEMAQQGRLWRED
>Mature_367_residues
PLSPDAPRRPLRPRRRAPPPPPGAAADPAGFPGVRLSLVDDLEAAARFFQLSRNGAGHAADAPIQVLALSGGGAGGAFGA
GALVGLTRSGERPTFDLVTGVSTGALIAPFAFLGPDWDARLADAYTGGYAAEMLGLAAVRPGPSLYPAERLAGLVARYVD
EALLAAVAEAHRGGRRLLAATANLDAQTTCIWDLGAIAARGGPEALALFADVLVASASVPGVFPPKLIRVESGGETYEEM
HVDGGAISPLFVVPEPLILRKAQNRPLARAEVYVLINTALDPSPRPTPLGVVPVLVRSFELMLRSTYRGALRSVAAFCEL
NGFLLHSAWIPADWDGANMLRFDREAMSRMFAHGAEMAQQGRLWRED

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38749; Mature: 38618

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLSPDAPRRPLRPRRRAPPPPPGAAADPAGFPGVRLSLVDDLEAAARFFQLSRNGAGHA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCC
ADAPIQVLALSGGGAGGAFGAGALVGLTRSGERPTFDLVTGVSTGALIAPFAFLGPDWDA
CCCCEEEEEEECCCCCCCCCCHHHEEEECCCCCCCCHHHHCCCCCHHHHHHHHHCCCCCC
RLADAYTGGYAAEMLGLAAVRPGPSLYPAERLAGLVARYVDEALLAAVAEAHRGGRRLLA
HHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
ATANLDAQTTCIWDLGAIAARGGPEALALFADVLVASASVPGVFPPKLIRVESGGETYEE
EECCCCCCEEEEEEHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCHHHH
MHVDGGAISPLFVVPEPLILRKAQNRPLARAEVYVLINTALDPSPRPTPLGVVPVLVRSF
HCCCCCCCCCEEECCCHHHHHHCCCCCCCEEEEEEEEEECCCCCCCCCCCCHHHHHHHHH
ELMLRSTYRGALRSVAAFCELNGFLLHSAWIPADWDGANMLRFDREAMSRMFAHGAEMAQ
HHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
QGRLWRED
CCCCCCCC
>Mature Secondary Structure 
PLSPDAPRRPLRPRRRAPPPPPGAAADPAGFPGVRLSLVDDLEAAARFFQLSRNGAGHA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCC
ADAPIQVLALSGGGAGGAFGAGALVGLTRSGERPTFDLVTGVSTGALIAPFAFLGPDWDA
CCCCEEEEEEECCCCCCCCCCHHHEEEECCCCCCCCHHHHCCCCCHHHHHHHHHCCCCCC
RLADAYTGGYAAEMLGLAAVRPGPSLYPAERLAGLVARYVDEALLAAVAEAHRGGRRLLA
HHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
ATANLDAQTTCIWDLGAIAARGGPEALALFADVLVASASVPGVFPPKLIRVESGGETYEE
EECCCCCCEEEEEEHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCHHHH
MHVDGGAISPLFVVPEPLILRKAQNRPLARAEVYVLINTALDPSPRPTPLGVVPVLVRSF
HCCCCCCCCCEEECCCHHHHHHCCCCCCCEEEEEEEEEECCCCCCCCCCCCHHHHHHHHH
ELMLRSTYRGALRSVAAFCELNGFLLHSAWIPADWDGANMLRFDREAMSRMFAHGAEMAQ
HHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
QGRLWRED
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA