| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197105493
Identifier: 197105493
GI number: 197105493
Start: 2274445
End: 2275416
Strand: Direct
Name: 197105493
Synonym: PHZ_c2030
Alternate gene names: NA
Gene position: 2274445-2275416 (Clockwise)
Preceding gene: 197105492
Following gene: 197105494
Centisome position: 56.91
GC content: 70.06
Gene sequence:
>972_bases ATGGAGAAGAACGCCAACTACGCGCTCGTGGGCCTGTCCACCCTGATCCTGGTGGCGGCCCTGGCCATCTTCATCGTCTG GCTGGCGCGGTTCCAGTTCGCCCAGGCGAACGACACCTACGACATCCTCTTCCAGGGCCCGGTGCGCGGCCTCTCCGAGG GCGGCGAGGTGCAGTTCAACGGCATCAAGGTCGGCGAGGTCACCAAGATCGCCCTCGACCGCACCAACCCCAGCCGGGTG ATCGCCCGGGTGCAGGTGACCTCGGACGTGCCGATCCGGGTGGATTCCTACGCCACCCTCGAGCCGCAGGGGATCACCGG GGTGAACTACATCCAGATCACCGCCGGCACGCCGTCCAGGCCGCTGCTGAAGGACGAGGCCCAGAAGCGCTGCGAGCGCG AGGGGATCGGCATCGGCCGAGAGTGCATCCCCGTGCTGCGCAGCCAGCGCAGCACCCTGTCGGACCTGCTGGAGGGCGGC GGCACCGTGCTGACGCGCACCATCGAGGCCCTGGACCGGGTGAACCGGGTCCTGTCCGACGAGAACATCAAGACGTTCTC GGCCGCGCTGTCCGACACCCAGGCGGTCACCGCCGAGCTGCGCGAGCGCAAGGCGATCATCGCCGACGCCCAGCAGGCGC TGCAGCGGGTCGAGGAGGCCACCGCCGAGATCACCCTGCTGACCCGCTCCACGCGCGACCTGATCGAGACCGACGGGCGG CGCACGACCCGCAACCTGGCCGACGCCGCCGAGGAGGCCCGAGCCGCCGCCGCCGACGTGCGGACCATGGTCGGCCGCCT GCAGGGGCCGACGACGGACTTCGCCACCAACGGCCTGCCGCAGATCACCGCCTCGGTGAGCCAGCTGCAGGAGACGGCCG AGTCGCTGGAGCGTCTGCTCAACGAGCTGCAGTCGCGCGGCATCGCCGGGTCGGTGTCCAAGAGGTCCGAGGAAGTGAAG GTGCCCCAATGA
Upstream 100 bases:
>100_bases GAGAAGGCGGACCATCCCTGGATCCGCGAGTATTTCCTCGGTCCCCGCGGCCGGGCCGCCAAGGCGGCCAAGGCGGGCGA CAAGGGATGAGAGAGGCCTG
Downstream 100 bases:
>100_bases CGACGATCCGCCTGGGCGCGCTGGCCGCCCTCGCCCTCTCCCTCTCGCTCTCCCTCGGGGGCTGCGCTCTCCTGGGCGGG GGCGAGAAGGCCACGCTGTA
Product: ABC transporter, periplasmic substrate-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 323; Mature: 323
Protein sequence:
>323_residues MEKNANYALVGLSTLILVAALAIFIVWLARFQFAQANDTYDILFQGPVRGLSEGGEVQFNGIKVGEVTKIALDRTNPSRV IARVQVTSDVPIRVDSYATLEPQGITGVNYIQITAGTPSRPLLKDEAQKRCEREGIGIGRECIPVLRSQRSTLSDLLEGG GTVLTRTIEALDRVNRVLSDENIKTFSAALSDTQAVTAELRERKAIIADAQQALQRVEEATAEITLLTRSTRDLIETDGR RTTRNLADAAEEARAAAADVRTMVGRLQGPTTDFATNGLPQITASVSQLQETAESLERLLNELQSRGIAGSVSKRSEEVK VPQ
Sequences:
>Translated_323_residues MEKNANYALVGLSTLILVAALAIFIVWLARFQFAQANDTYDILFQGPVRGLSEGGEVQFNGIKVGEVTKIALDRTNPSRV IARVQVTSDVPIRVDSYATLEPQGITGVNYIQITAGTPSRPLLKDEAQKRCEREGIGIGRECIPVLRSQRSTLSDLLEGG GTVLTRTIEALDRVNRVLSDENIKTFSAALSDTQAVTAELRERKAIIADAQQALQRVEEATAEITLLTRSTRDLIETDGR RTTRNLADAAEEARAAAADVRTMVGRLQGPTTDFATNGLPQITASVSQLQETAESLERLLNELQSRGIAGSVSKRSEEVK VPQ >Mature_323_residues MEKNANYALVGLSTLILVAALAIFIVWLARFQFAQANDTYDILFQGPVRGLSEGGEVQFNGIKVGEVTKIALDRTNPSRV IARVQVTSDVPIRVDSYATLEPQGITGVNYIQITAGTPSRPLLKDEAQKRCEREGIGIGRECIPVLRSQRSTLSDLLEGG GTVLTRTIEALDRVNRVLSDENIKTFSAALSDTQAVTAELRERKAIIADAQQALQRVEEATAEITLLTRSTRDLIETDGR RTTRNLADAAEEARAAAADVRTMVGRLQGPTTDFATNGLPQITASVSQLQETAESLERLLNELQSRGIAGSVSKRSEEVK VPQ
Specific function: Unknown
COG id: COG1463
COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, periplasmic component
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005586 - InterPro: IPR003399 [H]
Pfam domain/function: PF03886 DUF330; PF02470 MCE [H]
EC number: NA
Molecular weight: Translated: 35088; Mature: 35088
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKNANYALVGLSTLILVAALAIFIVWLARFQFAQANDTYDILFQGPVRGLSEGGEVQFN CCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEEEC GIKVGEVTKIALDRTNPSRVIARVQVTSDVPIRVDSYATLEPQGITGVNYIQITAGTPSR CEEECCEEEEEEECCCHHHEEEEEEECCCCCEEECCCEEECCCCCCCCCEEEEECCCCCC PLLKDEAQKRCEREGIGIGRECIPVLRSQRSTLSDLLEGGGTVLTRTIEALDRVNRVLSD CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC ENIKTFSAALSDTQAVTAELRERKAIIADAQQALQRVEEATAEITLLTRSTRDLIETDGR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHCCCC RTTRNLADAAEEARAAAADVRTMVGRLQGPTTDFATNGLPQITASVSQLQETAESLERLL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHH NELQSRGIAGSVSKRSEEVKVPQ HHHHHCCCCCCHHHCCCCCCCCC >Mature Secondary Structure MEKNANYALVGLSTLILVAALAIFIVWLARFQFAQANDTYDILFQGPVRGLSEGGEVQFN CCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEEEC GIKVGEVTKIALDRTNPSRVIARVQVTSDVPIRVDSYATLEPQGITGVNYIQITAGTPSR CEEECCEEEEEEECCCHHHEEEEEEECCCCCEEECCCEEECCCCCCCCCEEEEECCCCCC PLLKDEAQKRCEREGIGIGRECIPVLRSQRSTLSDLLEGGGTVLTRTIEALDRVNRVLSD CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC ENIKTFSAALSDTQAVTAELRERKAIIADAQQALQRVEEATAEITLLTRSTRDLIETDGR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHCCCC RTTRNLADAAEEARAAAADVRTMVGRLQGPTTDFATNGLPQITASVSQLQETAESLERLL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHH NELQSRGIAGSVSKRSEEVKVPQ HHHHHCCCCCCHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12597275; 1551834 [H]