Definition Phenylobacterium zucineum HLK1, complete genome.
Accession NC_011144
Length 3,996,255

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The map label for this gene is 197105493

Identifier: 197105493

GI number: 197105493

Start: 2274445

End: 2275416

Strand: Direct

Name: 197105493

Synonym: PHZ_c2030

Alternate gene names: NA

Gene position: 2274445-2275416 (Clockwise)

Preceding gene: 197105492

Following gene: 197105494

Centisome position: 56.91

GC content: 70.06

Gene sequence:

>972_bases
ATGGAGAAGAACGCCAACTACGCGCTCGTGGGCCTGTCCACCCTGATCCTGGTGGCGGCCCTGGCCATCTTCATCGTCTG
GCTGGCGCGGTTCCAGTTCGCCCAGGCGAACGACACCTACGACATCCTCTTCCAGGGCCCGGTGCGCGGCCTCTCCGAGG
GCGGCGAGGTGCAGTTCAACGGCATCAAGGTCGGCGAGGTCACCAAGATCGCCCTCGACCGCACCAACCCCAGCCGGGTG
ATCGCCCGGGTGCAGGTGACCTCGGACGTGCCGATCCGGGTGGATTCCTACGCCACCCTCGAGCCGCAGGGGATCACCGG
GGTGAACTACATCCAGATCACCGCCGGCACGCCGTCCAGGCCGCTGCTGAAGGACGAGGCCCAGAAGCGCTGCGAGCGCG
AGGGGATCGGCATCGGCCGAGAGTGCATCCCCGTGCTGCGCAGCCAGCGCAGCACCCTGTCGGACCTGCTGGAGGGCGGC
GGCACCGTGCTGACGCGCACCATCGAGGCCCTGGACCGGGTGAACCGGGTCCTGTCCGACGAGAACATCAAGACGTTCTC
GGCCGCGCTGTCCGACACCCAGGCGGTCACCGCCGAGCTGCGCGAGCGCAAGGCGATCATCGCCGACGCCCAGCAGGCGC
TGCAGCGGGTCGAGGAGGCCACCGCCGAGATCACCCTGCTGACCCGCTCCACGCGCGACCTGATCGAGACCGACGGGCGG
CGCACGACCCGCAACCTGGCCGACGCCGCCGAGGAGGCCCGAGCCGCCGCCGCCGACGTGCGGACCATGGTCGGCCGCCT
GCAGGGGCCGACGACGGACTTCGCCACCAACGGCCTGCCGCAGATCACCGCCTCGGTGAGCCAGCTGCAGGAGACGGCCG
AGTCGCTGGAGCGTCTGCTCAACGAGCTGCAGTCGCGCGGCATCGCCGGGTCGGTGTCCAAGAGGTCCGAGGAAGTGAAG
GTGCCCCAATGA

Upstream 100 bases:

>100_bases
GAGAAGGCGGACCATCCCTGGATCCGCGAGTATTTCCTCGGTCCCCGCGGCCGGGCCGCCAAGGCGGCCAAGGCGGGCGA
CAAGGGATGAGAGAGGCCTG

Downstream 100 bases:

>100_bases
CGACGATCCGCCTGGGCGCGCTGGCCGCCCTCGCCCTCTCCCTCTCGCTCTCCCTCGGGGGCTGCGCTCTCCTGGGCGGG
GGCGAGAAGGCCACGCTGTA

Product: ABC transporter, periplasmic substrate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 323; Mature: 323

Protein sequence:

>323_residues
MEKNANYALVGLSTLILVAALAIFIVWLARFQFAQANDTYDILFQGPVRGLSEGGEVQFNGIKVGEVTKIALDRTNPSRV
IARVQVTSDVPIRVDSYATLEPQGITGVNYIQITAGTPSRPLLKDEAQKRCEREGIGIGRECIPVLRSQRSTLSDLLEGG
GTVLTRTIEALDRVNRVLSDENIKTFSAALSDTQAVTAELRERKAIIADAQQALQRVEEATAEITLLTRSTRDLIETDGR
RTTRNLADAAEEARAAAADVRTMVGRLQGPTTDFATNGLPQITASVSQLQETAESLERLLNELQSRGIAGSVSKRSEEVK
VPQ

Sequences:

>Translated_323_residues
MEKNANYALVGLSTLILVAALAIFIVWLARFQFAQANDTYDILFQGPVRGLSEGGEVQFNGIKVGEVTKIALDRTNPSRV
IARVQVTSDVPIRVDSYATLEPQGITGVNYIQITAGTPSRPLLKDEAQKRCEREGIGIGRECIPVLRSQRSTLSDLLEGG
GTVLTRTIEALDRVNRVLSDENIKTFSAALSDTQAVTAELRERKAIIADAQQALQRVEEATAEITLLTRSTRDLIETDGR
RTTRNLADAAEEARAAAADVRTMVGRLQGPTTDFATNGLPQITASVSQLQETAESLERLLNELQSRGIAGSVSKRSEEVK
VPQ
>Mature_323_residues
MEKNANYALVGLSTLILVAALAIFIVWLARFQFAQANDTYDILFQGPVRGLSEGGEVQFNGIKVGEVTKIALDRTNPSRV
IARVQVTSDVPIRVDSYATLEPQGITGVNYIQITAGTPSRPLLKDEAQKRCEREGIGIGRECIPVLRSQRSTLSDLLEGG
GTVLTRTIEALDRVNRVLSDENIKTFSAALSDTQAVTAELRERKAIIADAQQALQRVEEATAEITLLTRSTRDLIETDGR
RTTRNLADAAEEARAAAADVRTMVGRLQGPTTDFATNGLPQITASVSQLQETAESLERLLNELQSRGIAGSVSKRSEEVK
VPQ

Specific function: Unknown

COG id: COG1463

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, periplasmic component

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005586
- InterPro:   IPR003399 [H]

Pfam domain/function: PF03886 DUF330; PF02470 MCE [H]

EC number: NA

Molecular weight: Translated: 35088; Mature: 35088

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKNANYALVGLSTLILVAALAIFIVWLARFQFAQANDTYDILFQGPVRGLSEGGEVQFN
CCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEEEC
GIKVGEVTKIALDRTNPSRVIARVQVTSDVPIRVDSYATLEPQGITGVNYIQITAGTPSR
CEEECCEEEEEEECCCHHHEEEEEEECCCCCEEECCCEEECCCCCCCCCEEEEECCCCCC
PLLKDEAQKRCEREGIGIGRECIPVLRSQRSTLSDLLEGGGTVLTRTIEALDRVNRVLSD
CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC
ENIKTFSAALSDTQAVTAELRERKAIIADAQQALQRVEEATAEITLLTRSTRDLIETDGR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHCCCC
RTTRNLADAAEEARAAAADVRTMVGRLQGPTTDFATNGLPQITASVSQLQETAESLERLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHH
NELQSRGIAGSVSKRSEEVKVPQ
HHHHHCCCCCCHHHCCCCCCCCC
>Mature Secondary Structure
MEKNANYALVGLSTLILVAALAIFIVWLARFQFAQANDTYDILFQGPVRGLSEGGEVQFN
CCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEEEC
GIKVGEVTKIALDRTNPSRVIARVQVTSDVPIRVDSYATLEPQGITGVNYIQITAGTPSR
CEEECCEEEEEEECCCHHHEEEEEEECCCCCEEECCCEEECCCCCCCCCEEEEECCCCCC
PLLKDEAQKRCEREGIGIGRECIPVLRSQRSTLSDLLEGGGTVLTRTIEALDRVNRVLSD
CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC
ENIKTFSAALSDTQAVTAELRERKAIIADAQQALQRVEEATAEITLLTRSTRDLIETDGR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHCCCC
RTTRNLADAAEEARAAAADVRTMVGRLQGPTTDFATNGLPQITASVSQLQETAESLERLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHH
NELQSRGIAGSVSKRSEEVKVPQ
HHHHHCCCCCCHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12597275; 1551834 [H]