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The map label for this gene is yrbE [C]

Identifier: 197105491

GI number: 197105491

Start: 2272468

End: 2273595

Strand: Direct

Name: yrbE [C]

Synonym: PHZ_c2028

Alternate gene names: 197105491

Gene position: 2272468-2273595 (Clockwise)

Preceding gene: 197105486

Following gene: 197105492

Centisome position: 56.86

GC content: 69.95

Gene sequence:

>1128_bases
ATGGAGAGACCCGCCGAGTTCACCCTGCAGCCCGCGACGGATCGTCCGACCGTGGCCCTCACCGGCGACTGGACGGCCCG
CGCGCTGGGCGGCGCAGGGACGGCGCTGGCCGAGGCGCTGGACGGCCTGACCAACATCGCCATCGACCTGAGCGGGGTGC
GCCGGCTGGACACCGCCGGCGCCTATGCGGTGGTGCGCGCCGCCGGGCCGGCGTTCGACGCGTCGAAGGTCGAGGCCCGC
CCCGAGGTCCGCCGCCTGCTGGAGGTGGTGGACGAGGCCGCGCGCATCCAGCCGGCGGTGCGCCAGGAGCCGAAGGGCTT
CCACGACCTGACGATCCGCGTCGGCAAGGGCGTGGTGGGCTTCGGCCACGACTTCATCGACACCATGGGCTTCCTCGGCC
ACCTGCTGGTGGTCCTGGCCCGCAGCCTCGTCCTGCTGTTCGTGAATCCGCGGAAGATCCGCTGGCCGGCGCTGGTCTCG
ATCATGGAGCGAGCCGGCCTGGACGCCATCCCGGTGGTGGCCGTGGCGACGTTCTTCATCGGCGCGGTGGTCGCCTTCAT
CGGCGCCGACATGCTCCAGCAGTTCGGGGCCGAGGTGTTCGCCGTGGAGCTGATCGGCATCTCGATGATGCGCGAGTTCA
ACATCGTCATCACCGCCGTGCTGCTGGCGGGCCGGTCCGCCTCGAGCTTCGCCGCCGAGATCGGCTCGATGAAGATGAGC
CAGGAGATCGACGCCATGAAGGTGATGGGCATCGATCCGTTCGAGGCCCTCGTCTTCCCGCGCTTCGCCGCCCTGCTGAT
CACCATCCCGCTGCTGACCTTCGTGGCCACCCTGGCCGGCCTGCTGGGCGGCATCGTGGTGACCTGGTCGGTGCTGGGCC
TGGGCCCCGCGTTCTTCCTGCAGCGGATCGTCGACAACGTCGGCGTGGACCACTTCTGGATCGCGCTGTCGAAGGCCCCG
GTGATGGCCGGGGTGATCGCCGGCATCGGCTGTCGCCAGGGGTTGGAGACGGGCGGCGACGTGGAGTCCCTGGGCCGGCG
GGTGACGGCGGCCGTGGTGCACGCCATCTTCGCGATCATCGTCATCGATGCGATCTTCGCCATGATCTACATGGAGCTCG
GCCTGTGA

Upstream 100 bases:

>100_bases
GTTCGCGCTTGCACCGTCTCTGCTAGGGTGCCCGGCTTTCGAGGAGATAAGACTCGGGTTGCGCGGTCGCCGCCTTCCGC
CCGCCTGAGGAACCGCCCGC

Downstream 100 bases:

>100_bases
GCGCGACCGACGCGGCCGCGCCCGACGAAGCCGTTCTGGGCGAGGACGAGCTGCTGGAGGGCGACGGCCCGGCCATCGAG
GTGCGCGGCCTGCGCTCGCA

Product: ABC transporter, permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 375; Mature: 375

Protein sequence:

>375_residues
MERPAEFTLQPATDRPTVALTGDWTARALGGAGTALAEALDGLTNIAIDLSGVRRLDTAGAYAVVRAAGPAFDASKVEAR
PEVRRLLEVVDEAARIQPAVRQEPKGFHDLTIRVGKGVVGFGHDFIDTMGFLGHLLVVLARSLVLLFVNPRKIRWPALVS
IMERAGLDAIPVVAVATFFIGAVVAFIGADMLQQFGAEVFAVELIGISMMREFNIVITAVLLAGRSASSFAAEIGSMKMS
QEIDAMKVMGIDPFEALVFPRFAALLITIPLLTFVATLAGLLGGIVVTWSVLGLGPAFFLQRIVDNVGVDHFWIALSKAP
VMAGVIAGIGCRQGLETGGDVESLGRRVTAAVVHAIFAIIVIDAIFAMIYMELGL

Sequences:

>Translated_375_residues
MERPAEFTLQPATDRPTVALTGDWTARALGGAGTALAEALDGLTNIAIDLSGVRRLDTAGAYAVVRAAGPAFDASKVEAR
PEVRRLLEVVDEAARIQPAVRQEPKGFHDLTIRVGKGVVGFGHDFIDTMGFLGHLLVVLARSLVLLFVNPRKIRWPALVS
IMERAGLDAIPVVAVATFFIGAVVAFIGADMLQQFGAEVFAVELIGISMMREFNIVITAVLLAGRSASSFAAEIGSMKMS
QEIDAMKVMGIDPFEALVFPRFAALLITIPLLTFVATLAGLLGGIVVTWSVLGLGPAFFLQRIVDNVGVDHFWIALSKAP
VMAGVIAGIGCRQGLETGGDVESLGRRVTAAVVHAIFAIIVIDAIFAMIYMELGL
>Mature_375_residues
MERPAEFTLQPATDRPTVALTGDWTARALGGAGTALAEALDGLTNIAIDLSGVRRLDTAGAYAVVRAAGPAFDASKVEAR
PEVRRLLEVVDEAARIQPAVRQEPKGFHDLTIRVGKGVVGFGHDFIDTMGFLGHLLVVLARSLVLLFVNPRKIRWPALVS
IMERAGLDAIPVVAVATFFIGAVVAFIGADMLQQFGAEVFAVELIGISMMREFNIVITAVLLAGRSASSFAAEIGSMKMS
QEIDAMKVMGIDPFEALVFPRFAALLITIPLLTFVATLAGLLGGIVVTWSVLGLGPAFFLQRIVDNVGVDHFWIALSKAP
VMAGVIAGIGCRQGLETGGDVESLGRRVTAAVVHAIFAIIVIDAIFAMIYMELGL

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG0767

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaE permease family [H]

Homologues:

Organism=Escherichia coli, GI1789585, Length=216, Percent_Identity=31.0185185185185, Blast_Score=97, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003453 [H]

Pfam domain/function: PF02405 DUF140 [H]

EC number: NA

Molecular weight: Translated: 39778; Mature: 39778

Theoretical pI: Translated: 5.41; Mature: 5.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERPAEFTLQPATDRPTVALTGDWTARALGGAGTALAEALDGLTNIAIDLSGVRRLDTAG
CCCCCCCEEECCCCCCEEEEECCCHHHHHCCCHHHHHHHHHHHHHHHEEHHHHHHHHCCC
AYAVVRAAGPAFDASKVEARPEVRRLLEVVDEAARIQPAVRQEPKGFHDLTIRVGKGVVG
HHHHEEECCCCCCCHHCCCCHHHHHHHHHHHHHHHCCHHHHCCCCCCHHEEEEECCCCEE
FGHDFIDTMGFLGHLLVVLARSLVLLFVNPRKIRWPALVSIMERAGLDAIPVVAVATFFI
CCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHH
GAVVAFIGADMLQQFGAEVFAVELIGISMMREFNIVITAVLLAGRSASSFAAEIGSMKMS
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
QEIDAMKVMGIDPFEALVFPRFAALLITIPLLTFVATLAGLLGGIVVTWSVLGLGPAFFL
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
QRIVDNVGVDHFWIALSKAPVMAGVIAGIGCRQGLETGGDVESLGRRVTAAVVHAIFAII
HHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
VIDAIFAMIYMELGL
HHHHHHHHHHHHHCC
>Mature Secondary Structure
MERPAEFTLQPATDRPTVALTGDWTARALGGAGTALAEALDGLTNIAIDLSGVRRLDTAG
CCCCCCCEEECCCCCCEEEEECCCHHHHHCCCHHHHHHHHHHHHHHHEEHHHHHHHHCCC
AYAVVRAAGPAFDASKVEARPEVRRLLEVVDEAARIQPAVRQEPKGFHDLTIRVGKGVVG
HHHHEEECCCCCCCHHCCCCHHHHHHHHHHHHHHHCCHHHHCCCCCCHHEEEEECCCCEE
FGHDFIDTMGFLGHLLVVLARSLVLLFVNPRKIRWPALVSIMERAGLDAIPVVAVATFFI
CCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHH
GAVVAFIGADMLQQFGAEVFAVELIGISMMREFNIVITAVLLAGRSASSFAAEIGSMKMS
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
QEIDAMKVMGIDPFEALVFPRFAALLITIPLLTFVATLAGLLGGIVVTWSVLGLGPAFFL
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
QRIVDNVGVDHFWIALSKAPVMAGVIAGIGCRQGLETGGDVESLGRRVTAAVVHAIFAII
HHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
VIDAIFAMIYMELGL
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]