| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is btuE [C]
Identifier: 197105444
GI number: 197105444
Start: 2213610
End: 2214089
Strand: Reverse
Name: btuE [C]
Synonym: PHZ_c1981
Alternate gene names: 197105444
Gene position: 2214089-2213610 (Counterclockwise)
Preceding gene: 197105445
Following gene: 197105443
Centisome position: 55.4
GC content: 68.12
Gene sequence:
>480_bases ATGACCGCCAGCGCCCACGAGTTTTCCTTCACCACCATCGACGGCGAGCCGCTGCCGCTCACCACCTTCCGCGACAAGGT GGTGCTGGTGGTCAACACCGCCTCGCAGTGCGGGCTGACGCCGCAGTACGACGGGCTGGAGAAGCTGTACGCCGAGTACC GCGGCCGCGGCTTCGTGGTGCTGGGCGTGCCCTGCAACCAGTTCGCCGGCCAGGAGCCCGGGGCCGAGGCCGAGATCAAA GACTTCTGCGAGACCCGGTTCGGCGTCGACTTCCCCCTGACGGCCAAGGTCGAGGTGAAAGGCGAGGGGGCCCATCCCTT CTACCGCTGGGCCCAGGAGCAGCTCGGCGAGCCGGCCGTGCCGGTGTGGAATTTCCACAAGATCCTGATCGGCAAGTCGG GCGAGGCGCTGCAGGCGTTCGGGCCGCGCACCGATCCGCTGGATTCCGACATCACCGACGCGATCGAGAGGGCGCTCTGA
Upstream 100 bases:
>100_bases CGATCCGCGCCCTCGACCTGGCCATCGCCGTCGAACAGGCGTTGGAGGACGCTGCGTAACGGCGCTAGCCTTGCGTCCCA GGTCCTCCAGGGAGGTCGCC
Downstream 100 bases:
>100_bases GCGAGGCCGTCGCCCGTTCGCTGGATCTGCTCGCCGAACGGGCGGGCGATCCGGCCCCGCTGGTCTACCGGCGGCTGTTC GAGGCGTTCCCCGAGATGGA
Product: glutathione peroxidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 159; Mature: 158
Protein sequence:
>159_residues MTASAHEFSFTTIDGEPLPLTTFRDKVVLVVNTASQCGLTPQYDGLEKLYAEYRGRGFVVLGVPCNQFAGQEPGAEAEIK DFCETRFGVDFPLTAKVEVKGEGAHPFYRWAQEQLGEPAVPVWNFHKILIGKSGEALQAFGPRTDPLDSDITDAIERAL
Sequences:
>Translated_159_residues MTASAHEFSFTTIDGEPLPLTTFRDKVVLVVNTASQCGLTPQYDGLEKLYAEYRGRGFVVLGVPCNQFAGQEPGAEAEIK DFCETRFGVDFPLTAKVEVKGEGAHPFYRWAQEQLGEPAVPVWNFHKILIGKSGEALQAFGPRTDPLDSDITDAIERAL >Mature_158_residues TASAHEFSFTTIDGEPLPLTTFRDKVVLVVNTASQCGLTPQYDGLEKLYAEYRGRGFVVLGVPCNQFAGQEPGAEAEIKD FCETRFGVDFPLTAKVEVKGEGAHPFYRWAQEQLGEPAVPVWNFHKILIGKSGEALQAFGPRTDPLDSDITDAIERAL
Specific function: Not Essential For B12 Transport; However, It Is An Auxiliary Component Of The Transport System. [C]
COG id: COG0386
COG function: function code O; Glutathione peroxidase
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutathione peroxidase family [H]
Homologues:
Organism=Homo sapiens, GI75709200, Length=151, Percent_Identity=41.0596026490066, Blast_Score=107, Evalue=3e-24, Organism=Homo sapiens, GI90903240, Length=151, Percent_Identity=41.0596026490066, Blast_Score=107, Evalue=6e-24, Organism=Homo sapiens, GI15618997, Length=138, Percent_Identity=38.4057971014493, Blast_Score=104, Evalue=4e-23, Organism=Homo sapiens, GI90903238, Length=131, Percent_Identity=41.2213740458015, Blast_Score=90, Evalue=9e-19, Organism=Homo sapiens, GI192455698, Length=140, Percent_Identity=34.2857142857143, Blast_Score=89, Evalue=2e-18, Organism=Homo sapiens, GI41406084, Length=173, Percent_Identity=34.1040462427746, Blast_Score=78, Evalue=3e-15, Organism=Homo sapiens, GI6006001, Length=182, Percent_Identity=34.6153846153846, Blast_Score=78, Evalue=4e-15, Organism=Homo sapiens, GI32967607, Length=189, Percent_Identity=30.6878306878307, Blast_Score=74, Evalue=6e-14, Organism=Homo sapiens, GI33186887, Length=182, Percent_Identity=30.2197802197802, Blast_Score=67, Evalue=8e-12, Organism=Homo sapiens, GI4557629, Length=151, Percent_Identity=32.4503311258278, Blast_Score=66, Evalue=1e-11, Organism=Escherichia coli, GI1788003, Length=169, Percent_Identity=43.7869822485207, Blast_Score=140, Evalue=4e-35, Organism=Caenorhabditis elegans, GI17506887, Length=162, Percent_Identity=37.037037037037, Blast_Score=119, Evalue=7e-28, Organism=Caenorhabditis elegans, GI17535473, Length=160, Percent_Identity=38.125, Blast_Score=117, Evalue=2e-27, Organism=Caenorhabditis elegans, GI71993584, Length=160, Percent_Identity=34.375, Blast_Score=109, Evalue=6e-25, Organism=Caenorhabditis elegans, GI193210707, Length=152, Percent_Identity=34.8684210526316, Blast_Score=92, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17550320, Length=180, Percent_Identity=28.8888888888889, Blast_Score=83, Evalue=7e-17, Organism=Caenorhabditis elegans, GI193209493, Length=180, Percent_Identity=27.7777777777778, Blast_Score=80, Evalue=4e-16, Organism=Caenorhabditis elegans, GI71993573, Length=95, Percent_Identity=38.9473684210526, Blast_Score=74, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6319721, Length=163, Percent_Identity=40.4907975460123, Blast_Score=140, Evalue=1e-34, Organism=Saccharomyces cerevisiae, GI6322228, Length=149, Percent_Identity=42.2818791946309, Blast_Score=134, Evalue=7e-33, Organism=Saccharomyces cerevisiae, GI6322826, Length=146, Percent_Identity=38.3561643835616, Blast_Score=125, Evalue=3e-30, Organism=Drosophila melanogaster, GI24656777, Length=162, Percent_Identity=40.1234567901235, Blast_Score=105, Evalue=9e-24, Organism=Drosophila melanogaster, GI24656767, Length=165, Percent_Identity=40, Blast_Score=105, Evalue=1e-23, Organism=Drosophila melanogaster, GI24656772, Length=165, Percent_Identity=40, Blast_Score=105, Evalue=1e-23, Organism=Drosophila melanogaster, GI85726443, Length=158, Percent_Identity=36.0759493670886, Blast_Score=94, Evalue=4e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000889 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00255 GSHPx [H]
EC number: =1.11.1.9 [H]
Molecular weight: Translated: 17465; Mature: 17334
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: PS00460 GLUTATHIONE_PEROXID_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTASAHEFSFTTIDGEPLPLTTFRDKVVLVVNTASQCGLTPQYDGLEKLYAEYRGRGFVV CCCCCCCEEEEEECCCCCCEEECCCEEEEEEECHHHCCCCCCCCCHHHHHHHHCCCEEEE LGVPCNQFAGQEPGAEAEIKDFCETRFGVDFPLTAKVEVKGEGAHPFYRWAQEQLGEPAV ECCCHHHHCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCC PVWNFHKILIGKSGEALQAFGPRTDPLDSDITDAIERAL CCCCCEEEEEECCCCCHHHCCCCCCCCCCHHHHHHHHCC >Mature Secondary Structure TASAHEFSFTTIDGEPLPLTTFRDKVVLVVNTASQCGLTPQYDGLEKLYAEYRGRGFVV CCCCCCEEEEEECCCCCCEEECCCEEEEEEECHHHCCCCCCCCCHHHHHHHHCCCEEEE LGVPCNQFAGQEPGAEAEIKDFCETRFGVDFPLTAKVEVKGEGAHPFYRWAQEQLGEPAV ECCCHHHHCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCC PVWNFHKILIGKSGEALQAFGPRTDPLDSDITDAIERAL CCCCCEEEEEECCCCCHHHCCCCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]