| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197105430
Identifier: 197105430
GI number: 197105430
Start: 2199552
End: 2200346
Strand: Reverse
Name: 197105430
Synonym: PHZ_c1967
Alternate gene names: NA
Gene position: 2200346-2199552 (Counterclockwise)
Preceding gene: 197105431
Following gene: 197105429
Centisome position: 55.06
GC content: 78.24
Gene sequence:
>795_bases ATGTCCGACCACGAGCGCGGCGCCTACACGCCCCCGACCGACGCGCCCCTCTCGTTCGACGCCCGCCAGCCGGTGCGGGG CGCGCGGCCCGTGCCGATCACCCTGATCATCAGCGTCCTGGTCCTGGCGGGCCTGGTGGCGGCGATCTTTGTCTTTTACC GCTCGGGCGTCCGGCAGGCGGGGGATGCGCCCCAGGCCGTCGGCGTGCCGGTCGAGGGCATGAAGACCGCGGCGCCCCCA GAGGCCCAGCCGCAGGACCCCGCCGCGGGCCTGCAGATCTACCGCTCCGAGGCGGGCGCCGCGCCCGAGGCCGTGCCGAC CTTCACCCCGGGGCCCGAGGAGCCGCAGCCGCGCCCTGCGCCGACCACGCCCGTTGTGGTGGCCCAGGCGCCGGCCCAGC GTGCGCCGCAACCCGCCCTGCGGCCCGCGCTGCCTGCCCAGGCTCCGGCCCAGGCGCCGGCCCAGGCCGCGCCGCCGCCC GCCGCGGCCAAGGCCCCGGAACCCAAGGCGCCTGAAGCCAAGGCGGCCCCGGCCCCCGCGCCGAAGGCCGCTTCCGGCGC CGCCGCCGTGCAGGTGGGCGCCGTCTCCTCGCCGGCGCTGGCCGACAAGACCTGGAACGAGGCGGTCGCCGCCGCGCCCG GGCTCGCCGCCGGCAAGGGCAAGGCCGTCGAGAAGGTCGAGCGCAACGGCGCGACGCTCTACCGGACCCTGGTCACCGGC TTCGCCAGCCGCGAGGACGCCCAGGCGTTCTGCGGCCGCCTGAAGGCCGCGGGGAAGGCCTGCTTCGTCCGGTGA
Upstream 100 bases:
>100_bases CAGGCGCTGGCGGGGCCCATGCTCCGCTAGACTGCCCCCACACGCGCGCGATTCGCGTCCCGACGCGGGCGCGCGCCAGA CGACGTCTCGGAGCCTACGC
Downstream 100 bases:
>100_bases GCGTCTCGGCCGCGATCCTGGGCTGCTCGGGCCCCGCGCTGACCGCGGAGGAGGCCGCCTTCTTCCGGGACGTGCGGCCC TGGGGCTTCATCCTGTTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: Sporulation And Repeat Protein
Number of amino acids: Translated: 264; Mature: 263
Protein sequence:
>264_residues MSDHERGAYTPPTDAPLSFDARQPVRGARPVPITLIISVLVLAGLVAAIFVFYRSGVRQAGDAPQAVGVPVEGMKTAAPP EAQPQDPAAGLQIYRSEAGAAPEAVPTFTPGPEEPQPRPAPTTPVVVAQAPAQRAPQPALRPALPAQAPAQAPAQAAPPP AAAKAPEPKAPEAKAAPAPAPKAASGAAAVQVGAVSSPALADKTWNEAVAAAPGLAAGKGKAVEKVERNGATLYRTLVTG FASREDAQAFCGRLKAAGKACFVR
Sequences:
>Translated_264_residues MSDHERGAYTPPTDAPLSFDARQPVRGARPVPITLIISVLVLAGLVAAIFVFYRSGVRQAGDAPQAVGVPVEGMKTAAPP EAQPQDPAAGLQIYRSEAGAAPEAVPTFTPGPEEPQPRPAPTTPVVVAQAPAQRAPQPALRPALPAQAPAQAPAQAAPPP AAAKAPEPKAPEAKAAPAPAPKAASGAAAVQVGAVSSPALADKTWNEAVAAAPGLAAGKGKAVEKVERNGATLYRTLVTG FASREDAQAFCGRLKAAGKACFVR >Mature_263_residues SDHERGAYTPPTDAPLSFDARQPVRGARPVPITLIISVLVLAGLVAAIFVFYRSGVRQAGDAPQAVGVPVEGMKTAAPPE AQPQDPAAGLQIYRSEAGAAPEAVPTFTPGPEEPQPRPAPTTPVVVAQAPAQRAPQPALRPALPAQAPAQAPAQAAPPPA AAKAPEPKAPEAKAAPAPAPKAASGAAAVQVGAVSSPALADKTWNEAVAAAPGLAAGKGKAVEKVERNGATLYRTLVTGF ASREDAQAFCGRLKAAGKACFVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26586; Mature: 26455
Theoretical pI: Translated: 9.96; Mature: 9.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDHERGAYTPPTDAPLSFDARQPVRGARPVPITLIISVLVLAGLVAAIFVFYRSGVRQA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GDAPQAVGVPVEGMKTAAPPEAQPQDPAAGLQIYRSEAGAAPEAVPTFTPGPEEPQPRPA CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC PTTPVVVAQAPAQRAPQPALRPALPAQAPAQAPAQAAPPPAAAKAPEPKAPEAKAAPAPA CCCCEEEECCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PKAASGAAAVQVGAVSSPALADKTWNEAVAAAPGLAAGKGKAVEKVERNGATLYRTLVTG CCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHH FASREDAQAFCGRLKAAGKACFVR HCCCHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SDHERGAYTPPTDAPLSFDARQPVRGARPVPITLIISVLVLAGLVAAIFVFYRSGVRQA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GDAPQAVGVPVEGMKTAAPPEAQPQDPAAGLQIYRSEAGAAPEAVPTFTPGPEEPQPRPA CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC PTTPVVVAQAPAQRAPQPALRPALPAQAPAQAPAQAAPPPAAAKAPEPKAPEAKAAPAPA CCCCEEEECCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PKAASGAAAVQVGAVSSPALADKTWNEAVAAAPGLAAGKGKAVEKVERNGATLYRTLVTG CCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHH FASREDAQAFCGRLKAAGKACFVR HCCCHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA