Click here to switch to the map view.

The map label for this gene is dksA [H]

Identifier: 197105396

GI number: 197105396

Start: 2167371

End: 2167799

Strand: Reverse

Name: dksA [H]

Synonym: PHZ_c1933

Alternate gene names: 197105396

Gene position: 2167799-2167371 (Counterclockwise)

Preceding gene: 197105397

Following gene: 197105395

Centisome position: 54.25

GC content: 64.1

Gene sequence:

>429_bases
ATGAAGACAGCCGCAGTTCTGGCTGAGAGTCCTGAATACCGTCCTTCCGAGGACGAGGAATTCATGAACGAGCGCCAGCT
TGAGTACTTCAAGCAGAAGCTCCTGAAGTGGAAAGAGGACATCCTCCGCGAATCTCGCGAGACGCTGTCCCACCTGCAAA
GCGAAACCGAGAACCATCCGGATCTGGCCGACCGCGCGTCGTCCGAGACTGACCGGGCTCTCGAGCTTCGTACGCGGGAC
CGTCAGCGCAAGCTGATCTCCAAGATCGACGAGGCGTTGCGGCGGATCGAGGACGGCTCCTACGGCTTCTGCGAGGAGAC
CGGCGAGCCGATCGGCATCGCCCGGCTGGAGGCCAGGCCCATCGCCACCCTCAGCCTCGAGGCCCAGGAGCGCCACGAGC
GGCGCGAGCGGGTCCACCGCGACGACTGA

Upstream 100 bases:

>100_bases
GGCGTAATCGCACTTGGAAAACCACCGGCGTTGAAACCGCGGTTCGATTTGCTATACAGCCCCCGCGTGTCTCAGGGCGT
CCAGGGGGCGTGAGGGTTTC

Downstream 100 bases:

>100_bases
TTGAACGGCCCCGCCTCGGGGCCGTTTTGCTGTCGGCCGTGGAGCGGAGGACAGTGCATGTCGCGGGTCGTCGGGATCGA
CCATCTGTCGGTGCGGGTCA

Product: dnaK suppressor protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MKTAAVLAESPEYRPSEDEEFMNERQLEYFKQKLLKWKEDILRESRETLSHLQSETENHPDLADRASSETDRALELRTRD
RQRKLISKIDEALRRIEDGSYGFCEETGEPIGIARLEARPIATLSLEAQERHERRERVHRDD

Sequences:

>Translated_142_residues
MKTAAVLAESPEYRPSEDEEFMNERQLEYFKQKLLKWKEDILRESRETLSHLQSETENHPDLADRASSETDRALELRTRD
RQRKLISKIDEALRRIEDGSYGFCEETGEPIGIARLEARPIATLSLEAQERHERRERVHRDD
>Mature_142_residues
MKTAAVLAESPEYRPSEDEEFMNERQLEYFKQKLLKWKEDILRESRETLSHLQSETENHPDLADRASSETDRALELRTRD
RQRKLISKIDEALRRIEDGSYGFCEETGEPIGIARLEARPIATLSLEAQERHERRERVHRDD

Specific function: Dosage-Dependent Suppressor Of A Dnak Deletion Mutation. It Suppressed Not Only The Temperature-Sensitive Growth But Also The Filamentous Phenotype Of The Dnak Deletion Strain, While The Defect Of Lambda Growth Is Not Suppressed. [C]

COG id: COG1734

COG function: function code T; DnaK suppressor protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 dksA C4-type zinc finger [H]

Homologues:

Organism=Escherichia coli, GI1786338, Length=137, Percent_Identity=43.0656934306569, Blast_Score=115, Evalue=2e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012784
- InterPro:   IPR000962
- InterPro:   IPR020458 [H]

Pfam domain/function: PF01258 zf-dskA_traR [H]

EC number: NA

Molecular weight: Translated: 16795; Mature: 16795

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: PS01102 ZF_DKSA_1 ; PS51128 ZF_DKSA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTAAVLAESPEYRPSEDEEFMNERQLEYFKQKLLKWKEDILRESRETLSHLQSETENHP
CCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
DLADRASSETDRALELRTRDRQRKLISKIDEALRRIEDGSYGFCEETGEPIGIARLEARP
CHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCEEEECCCC
IATLSLEAQERHERRERVHRDD
CHHEEHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKTAAVLAESPEYRPSEDEEFMNERQLEYFKQKLLKWKEDILRESRETLSHLQSETENHP
CCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
DLADRASSETDRALELRTRDRQRKLISKIDEALRRIEDGSYGFCEETGEPIGIARLEARP
CHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCEEEECCCC
IATLSLEAQERHERRERVHRDD
CHHEEHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9555902 [H]