Definition Phenylobacterium zucineum HLK1, complete genome.
Accession NC_011144
Length 3,996,255

Click here to switch to the map view.

The map label for this gene is 197105369

Identifier: 197105369

GI number: 197105369

Start: 2132518

End: 2134725

Strand: Reverse

Name: 197105369

Synonym: PHZ_c1906

Alternate gene names: NA

Gene position: 2134725-2132518 (Counterclockwise)

Preceding gene: 197105373

Following gene: 197105363

Centisome position: 53.42

GC content: 72.01

Gene sequence:

>2208_bases
ATGGGCGACATCCACCGGACCACCGAGGCCGTCCCGCGGGCGGACGACTCCGAGGCCCTGGCCAGATACCGCGCCGTCCG
CCGGGCGACCGAGGCGCTGATCCGCTCGCTGACGCCCGAGGACATGCAGGTCCAGTCGATGCCGGACGCCAGCCCGACCA
AGTGGCACCTGGCGCACGTCAGCTGGTTCTTCGAGACCTTCCTGCTGACGCCGCACCTGACGGGCTACCGGGTGTTCGAT
CCGCGCTTCGGCTATCTGTTCAACTCCTACTACGAGGCGGTCGGCGCCCGGCAGCCGCGGCCCGAACGCGGGCTGATGAC
CCGGCCCTCGTTCGACGACGTCATGGCCTACCGCGCCCACGTCGACGCCGGCATGGCGCGGCTGCTGGCCGGCGGGGCGG
GACCGCACGCCGACCTCCTCGACCTCGGCCTCGCCCACGAGCAGCAGCATCAGGAGCTGATCCTGATGGACATCCTGCAC
CTGTTCGCCGGCTCGCCGCTGCAGCCGGCCTATGCACCGCCCAAGGGCGTCCCGCAGACGGAGCCCGCGCCTGCGGCCTG
GATCGGTTTCGAGGGCGGGCTGGTCGAGATCGGCCATGCGGGACCGGGCTTCGCCTTCGACAACGAGACGCCGCGCCACA
AGGTCTGGCTCGAGCCCTTCCGCCTCGCCGACCGGCTGGTGACCAACGGCGAGTGGCTGGCCTTCATGGCCGACGGCGGC
TACGGCCGGCCCGAGTTCTGGCTCTCTGACGGCTGGGCCCGCGTCCAGGCCGAGGGCTGGCGCGCGCCGCTCTACTGGCG
CGAGGGCGAGGACGGCTGGACCGAGATGACCCTCAGGGGCCCGCGTCCGGTGAACCCCGCGGCCCCGGTCAGCCACGTGA
GCTACTTCGAGGCCGACGCCTACGCGGCCTGGGCGGGGGCGCGCCTGCCGACCGAGGCCGAGTGGGAGCACGCCGCCGCC
CACGCCTGGCACGACGGCGAGTTCCTGACATCGGGCCGCCTGACCGCCCAGCCCGCGCCGGCTGGCGAGGGCCTGCGCCA
GATGTACGGCGACCTCTGGGAATGGACCCGCAGCGCCTATGCGCCCTATCCGGGCTTCAAGCCGGCCAAGGGCGCTGTCG
GCGAGTACAACGGCAAGTTCATGGCCGGCCAGTTCGTCCTGCGCGGCGGCGCCTGCGTCACGCCGGGCGGCCATGTCCGG
GCCAGCTACCGCAACTTCTTCTATCCGCATCAGCGGTGGATGTTCTCGGGCGTGCGCCTGGCGCGCGACGGCGTGCGCGA
CGTCGCGGAAGACGACAGCTTCGAGGCGGATGTGGTCGCGGGCCTCTCCCGCCCGCGCAAGACGATCCCGCCCAAATACT
TCTACGACGCCGAGGGCTCGCGCCTGTTCGAGGCGATCACCGCGCTCGCCGAGTACTATCCGACCCGCACCGAGCTTGCC
CTGCTGCGCAGCGCGGCCGGCGAGATCGCCGCCGAGATCCCCGACGGCGCGGCGCTGGTGGAGTTCGGCAGCGGCGCCAG
CCTGAAGACCCGCATCGTCCTCGACGCCGCGCCGCAGGTGGCCGTCTATGCGCCCATCGACATCAGCGCCTCTGCGCTCG
AGGGGGCGGCCAAGGCGATCCGGGCCGACTATCCGAAGCTGGCCGTCGCCCCGCTGTGCGAGGACTTCACCCGCGCCCTG
GAGCTGCCGGTGGCCGCCGCGGGCCGGCCGGTGGTGGGCTTCTTCCCCGGCTCGACCATTGGCAACTTCACGCCGCAGGA
GGCCCAGGCGTTCCTGGCCGGCGCCCGCCGCCTGCTGGGCGACGGCGCGGCGTTCCTGGTGGGGATCGACCTGAAAAAGG
ACGCCGCCACGCTGGTGGCGGCCTATGACGACGCGCTCGGCGTCACGGCGGCGTTCAACAAGAACCTGCTGGCGCGGATC
AACCGCGAACTGGGCGGCGACTTCGACCTTGACGCCTTCGCGCACCGCGCGGTCTGGAACGATGCGGAGAGCCGCATCGA
GATGCACCTGATGAGCCTGAAGGACCAGGCGGTCGGCGTGGCCGGCCGGACGTTCCGCTTCGCGGCCGGGGAGACCCTGC
ACACCGAGAACTCCTACAAGTTCACCGTGGAGGGGTTCGGCGAACTCGCCGCGGCGGCTGGCTGGAGGCTCGAGCGGTGG
TGGGCGTCCGCCCACCCCGCCTTCGCCATGGTGCTGTTGAGAGCCTAG

Upstream 100 bases:

>100_bases
TGCCGACGCTGGGCCCGAAGCTTCACAAATGACGGCAAGGATCGGTTGTGGCGGCGCAACCGTGCGCCCACATCAGCCGC
CTGACGGCGAGGAGAGCTTC

Downstream 100 bases:

>100_bases
CTCTCGCGGCCCCGGGAGCGGCCGCCGCCGCGGGAGGCCTCGCCGCCCTTGCGCCCGGCCGAGGCGGCCAGGTCGCGGTC
CTTCGCGAAGCTGCGCTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 735; Mature: 734

Protein sequence:

>735_residues
MGDIHRTTEAVPRADDSEALARYRAVRRATEALIRSLTPEDMQVQSMPDASPTKWHLAHVSWFFETFLLTPHLTGYRVFD
PRFGYLFNSYYEAVGARQPRPERGLMTRPSFDDVMAYRAHVDAGMARLLAGGAGPHADLLDLGLAHEQQHQELILMDILH
LFAGSPLQPAYAPPKGVPQTEPAPAAWIGFEGGLVEIGHAGPGFAFDNETPRHKVWLEPFRLADRLVTNGEWLAFMADGG
YGRPEFWLSDGWARVQAEGWRAPLYWREGEDGWTEMTLRGPRPVNPAAPVSHVSYFEADAYAAWAGARLPTEAEWEHAAA
HAWHDGEFLTSGRLTAQPAPAGEGLRQMYGDLWEWTRSAYAPYPGFKPAKGAVGEYNGKFMAGQFVLRGGACVTPGGHVR
ASYRNFFYPHQRWMFSGVRLARDGVRDVAEDDSFEADVVAGLSRPRKTIPPKYFYDAEGSRLFEAITALAEYYPTRTELA
LLRSAAGEIAAEIPDGAALVEFGSGASLKTRIVLDAAPQVAVYAPIDISASALEGAAKAIRADYPKLAVAPLCEDFTRAL
ELPVAAAGRPVVGFFPGSTIGNFTPQEAQAFLAGARRLLGDGAAFLVGIDLKKDAATLVAAYDDALGVTAAFNKNLLARI
NRELGGDFDLDAFAHRAVWNDAESRIEMHLMSLKDQAVGVAGRTFRFAAGETLHTENSYKFTVEGFGELAAAAGWRLERW
WASAHPAFAMVLLRA

Sequences:

>Translated_735_residues
MGDIHRTTEAVPRADDSEALARYRAVRRATEALIRSLTPEDMQVQSMPDASPTKWHLAHVSWFFETFLLTPHLTGYRVFD
PRFGYLFNSYYEAVGARQPRPERGLMTRPSFDDVMAYRAHVDAGMARLLAGGAGPHADLLDLGLAHEQQHQELILMDILH
LFAGSPLQPAYAPPKGVPQTEPAPAAWIGFEGGLVEIGHAGPGFAFDNETPRHKVWLEPFRLADRLVTNGEWLAFMADGG
YGRPEFWLSDGWARVQAEGWRAPLYWREGEDGWTEMTLRGPRPVNPAAPVSHVSYFEADAYAAWAGARLPTEAEWEHAAA
HAWHDGEFLTSGRLTAQPAPAGEGLRQMYGDLWEWTRSAYAPYPGFKPAKGAVGEYNGKFMAGQFVLRGGACVTPGGHVR
ASYRNFFYPHQRWMFSGVRLARDGVRDVAEDDSFEADVVAGLSRPRKTIPPKYFYDAEGSRLFEAITALAEYYPTRTELA
LLRSAAGEIAAEIPDGAALVEFGSGASLKTRIVLDAAPQVAVYAPIDISASALEGAAKAIRADYPKLAVAPLCEDFTRAL
ELPVAAAGRPVVGFFPGSTIGNFTPQEAQAFLAGARRLLGDGAAFLVGIDLKKDAATLVAAYDDALGVTAAFNKNLLARI
NRELGGDFDLDAFAHRAVWNDAESRIEMHLMSLKDQAVGVAGRTFRFAAGETLHTENSYKFTVEGFGELAAAAGWRLERW
WASAHPAFAMVLLRA
>Mature_734_residues
GDIHRTTEAVPRADDSEALARYRAVRRATEALIRSLTPEDMQVQSMPDASPTKWHLAHVSWFFETFLLTPHLTGYRVFDP
RFGYLFNSYYEAVGARQPRPERGLMTRPSFDDVMAYRAHVDAGMARLLAGGAGPHADLLDLGLAHEQQHQELILMDILHL
FAGSPLQPAYAPPKGVPQTEPAPAAWIGFEGGLVEIGHAGPGFAFDNETPRHKVWLEPFRLADRLVTNGEWLAFMADGGY
GRPEFWLSDGWARVQAEGWRAPLYWREGEDGWTEMTLRGPRPVNPAAPVSHVSYFEADAYAAWAGARLPTEAEWEHAAAH
AWHDGEFLTSGRLTAQPAPAGEGLRQMYGDLWEWTRSAYAPYPGFKPAKGAVGEYNGKFMAGQFVLRGGACVTPGGHVRA
SYRNFFYPHQRWMFSGVRLARDGVRDVAEDDSFEADVVAGLSRPRKTIPPKYFYDAEGSRLFEAITALAEYYPTRTELAL
LRSAAGEIAAEIPDGAALVEFGSGASLKTRIVLDAAPQVAVYAPIDISASALEGAAKAIRADYPKLAVAPLCEDFTRALE
LPVAAAGRPVVGFFPGSTIGNFTPQEAQAFLAGARRLLGDGAAFLVGIDLKKDAATLVAAYDDALGVTAAFNKNLLARIN
RELGGDFDLDAFAHRAVWNDAESRIEMHLMSLKDQAVGVAGRTFRFAAGETLHTENSYKFTVEGFGELAAAAGWRLERWW
ASAHPAFAMVLLRA

Specific function: Unknown

COG id: COG1262

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI257470975, Length=196, Percent_Identity=30.1020408163265, Blast_Score=67, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 80454; Mature: 80323

Theoretical pI: Translated: 5.80; Mature: 5.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGDIHRTTEAVPRADDSEALARYRAVRRATEALIRSLTPEDMQVQSMPDASPTKWHLAHV
CCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCEEHHHHH
SWFFETFLLTPHLTGYRVFDPRFGYLFNSYYEAVGARQPRPERGLMTRPSFDDVMAYRAH
HHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHH
VDAGMARLLAGGAGPHADLLDLGLAHEQQHQELILMDILHLFAGSPLQPAYAPPKGVPQT
HHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
EPAPAAWIGFEGGLVEIGHAGPGFAFDNETPRHKVWLEPFRLADRLVTNGEWLAFMADGG
CCCCEEEEECCCCEEEECCCCCCCCCCCCCCCCEEECCHHHHHHHHHCCCCEEEEEECCC
YGRPEFWLSDGWARVQAEGWRAPLYWREGEDGWTEMTLRGPRPVNPAAPVSHVSYFEADA
CCCCCEEECCCEEEEEECCCCCCEEEECCCCCCEEEEECCCCCCCCCCCHHHHHHHCCCH
YAAWAGARLPTEAEWEHAAAHAWHDGEFLTSGRLTAQPAPAGEGLRQMYGDLWEWTRSAY
HHHHCCCCCCCCCCHHHHHHHCCCCCCEEECCCEECCCCCCHHHHHHHHHHHHHHHHHCC
APYPGFKPAKGAVGEYNGKFMAGQFVLRGGACVTPGGHVRASYRNFFYPHQRWMFSGVRL
CCCCCCCCCCCCCCCCCCCEEEEEEEEECCCEECCCCCEEEHHHHCCCCHHHHHHHHHHH
ARDGVRDVAEDDSFEADVVAGLSRPRKTIPPKYFYDAEGSRLFEAITALAEYYPTRTELA
HHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHCCCHHHHH
LLRSAAGEIAAEIPDGAALVEFGSGASLKTRIVLDAAPQVAVYAPIDISASALEGAAKAI
HHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEEEECCCCEEEEECCCCCHHHHHHHHHHH
RADYPKLAVAPLCEDFTRALELPVAAAGRPVVGFFPGSTIGNFTPQEAQAFLAGARRLLG
HCCCCCHHHHHHHHHHHHHHCCCHHCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHC
DGAAFLVGIDLKKDAATLVAAYDDALGVTAAFNKNLLARINRELGGDFDLDAFAHRAVWN
CCCEEEEEEECCCCHHHEEEEHHCCCCEEHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHC
DAESRIEMHLMSLKDQAVGVAGRTFRFAAGETLHTENSYKFTVEGFGELAAAAGWRLERW
CHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEECCCCEEEEECCHHHHHHHHCCHHHHH
WASAHPAFAMVLLRA
HHCCCHHHHEEEECC
>Mature Secondary Structure 
GDIHRTTEAVPRADDSEALARYRAVRRATEALIRSLTPEDMQVQSMPDASPTKWHLAHV
CCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCEEHHHHH
SWFFETFLLTPHLTGYRVFDPRFGYLFNSYYEAVGARQPRPERGLMTRPSFDDVMAYRAH
HHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHH
VDAGMARLLAGGAGPHADLLDLGLAHEQQHQELILMDILHLFAGSPLQPAYAPPKGVPQT
HHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
EPAPAAWIGFEGGLVEIGHAGPGFAFDNETPRHKVWLEPFRLADRLVTNGEWLAFMADGG
CCCCEEEEECCCCEEEECCCCCCCCCCCCCCCCEEECCHHHHHHHHHCCCCEEEEEECCC
YGRPEFWLSDGWARVQAEGWRAPLYWREGEDGWTEMTLRGPRPVNPAAPVSHVSYFEADA
CCCCCEEECCCEEEEEECCCCCCEEEECCCCCCEEEEECCCCCCCCCCCHHHHHHHCCCH
YAAWAGARLPTEAEWEHAAAHAWHDGEFLTSGRLTAQPAPAGEGLRQMYGDLWEWTRSAY
HHHHCCCCCCCCCCHHHHHHHCCCCCCEEECCCEECCCCCCHHHHHHHHHHHHHHHHHCC
APYPGFKPAKGAVGEYNGKFMAGQFVLRGGACVTPGGHVRASYRNFFYPHQRWMFSGVRL
CCCCCCCCCCCCCCCCCCCEEEEEEEEECCCEECCCCCEEEHHHHCCCCHHHHHHHHHHH
ARDGVRDVAEDDSFEADVVAGLSRPRKTIPPKYFYDAEGSRLFEAITALAEYYPTRTELA
HHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHCCCHHHHH
LLRSAAGEIAAEIPDGAALVEFGSGASLKTRIVLDAAPQVAVYAPIDISASALEGAAKAI
HHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEEEECCCCEEEEECCCCCHHHHHHHHHHH
RADYPKLAVAPLCEDFTRALELPVAAAGRPVVGFFPGSTIGNFTPQEAQAFLAGARRLLG
HCCCCCHHHHHHHHHHHHHHCCCHHCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHC
DGAAFLVGIDLKKDAATLVAAYDDALGVTAAFNKNLLARINRELGGDFDLDAFAHRAVWN
CCCEEEEEEECCCCHHHEEEEHHCCCCEEHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHC
DAESRIEMHLMSLKDQAVGVAGRTFRFAAGETLHTENSYKFTVEGFGELAAAAGWRLERW
CHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEECCCCEEEEECCHHHHHHHHCCHHHHH
WASAHPAFAMVLLRA
HHCCCHHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA