| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is thiG
Identifier: 197105310
GI number: 197105310
Start: 2071434
End: 2072222
Strand: Reverse
Name: thiG
Synonym: PHZ_c1847
Alternate gene names: 197105310
Gene position: 2072222-2071434 (Counterclockwise)
Preceding gene: 197105311
Following gene: 197105309
Centisome position: 51.85
GC content: 69.84
Gene sequence:
>789_bases ATGGATGGGTCTGTCCGGAGCGAGGACACTTGGACGGTCGCCGGCCGCACGTTCCGTTCGCGCCTGATCGTCGGCACCGG CAAGTACAAGGACTACGCCCAGAACGCCGCCGCGGCCGAGGCCGCCGGGGCCGAGATCGTCACCGTGGCGGTGCGGCGGG TGAACCTTTCCGATCCCAGCCAGCCGATGCTGGTGGACCATGTGAAGCCCGACCGCTTCACCTTCCTGCCCAACACCGCG GGCTGCTTCACCGGCGAGGACGCCATCCGCACCCTGCGCCTGGCGCGCGAGGCGGGGGGCTGGGACCTGGTGAAGTTGGA GGTCCTGTCCAACACCAAGCATCTCCTGCCCGACATGGAGGAGACGCTGCGGGCGCTGAAGCTGCTGATCGCGGACGGCT TCCAGGTGATGGTCTACTGCTCGGACGATCCGGTCTACGCCAAGAAGCTGGAGGAGGCGGGGGCCGCCGCCATCATGCCG GCCGCCGCGCCGATCGGCTCGGGGCGGGGCATCCAGAACGCCCTGAACCTCGCGCTCATCATCGAGCAGGCCAAGGTGCC GGTGCTGGTCGACGCGGGCGTCGGCACGGCCTCGGACGCCACGATCGCCATGGAGCTGGGCTGCGACGCGGTGCTGATGA ACACCGCCATCGCCGAGGCCAAGGATCCGATCCGCATGGCCCGCGCCATGCGCCACGCCGTGATCGCCGGTCGCGAGGCC TATCTGGCCGGCCGCATGCCCAAGCGGATGTACGCCGAGCCGTCCTCGCCGCTGTCGGGCCTGATCTGA
Upstream 100 bases:
>100_bases GAGCGGAACCTGGAGATCGTGCCGAGGTCGGCCTATTCGGCCACGGCGCTCGCCGAGGGCGACCGGATCGAGATCGTGCA TTTCATCGGAGGCGGCTGAC
Downstream 100 bases:
>100_bases TGAGCCGCAAGTCGATCTTCATCACCGGCGCGGCCTCGGGCATGGGCCGCGAGACGGCGCTGCTGTTCGCCGAGAAGGGC TGGTTCGTCGGCGCCTACGA
Product: thiazole synthase
Products: 4-methyl-5-(beta-hydroxyethyl)thiazole phosphate; 4-hydroxy-benzyl-alcohol; C1 of tyrosine; ThiS protein [C]
Alternate protein names: NA
Number of amino acids: Translated: 262; Mature: 262
Protein sequence:
>262_residues MDGSVRSEDTWTVAGRTFRSRLIVGTGKYKDYAQNAAAAEAAGAEIVTVAVRRVNLSDPSQPMLVDHVKPDRFTFLPNTA GCFTGEDAIRTLRLAREAGGWDLVKLEVLSNTKHLLPDMEETLRALKLLIADGFQVMVYCSDDPVYAKKLEEAGAAAIMP AAAPIGSGRGIQNALNLALIIEQAKVPVLVDAGVGTASDATIAMELGCDAVLMNTAIAEAKDPIRMARAMRHAVIAGREA YLAGRMPKRMYAEPSSPLSGLI
Sequences:
>Translated_262_residues MDGSVRSEDTWTVAGRTFRSRLIVGTGKYKDYAQNAAAAEAAGAEIVTVAVRRVNLSDPSQPMLVDHVKPDRFTFLPNTA GCFTGEDAIRTLRLAREAGGWDLVKLEVLSNTKHLLPDMEETLRALKLLIADGFQVMVYCSDDPVYAKKLEEAGAAAIMP AAAPIGSGRGIQNALNLALIIEQAKVPVLVDAGVGTASDATIAMELGCDAVLMNTAIAEAKDPIRMARAMRHAVIAGREA YLAGRMPKRMYAEPSSPLSGLI >Mature_262_residues MDGSVRSEDTWTVAGRTFRSRLIVGTGKYKDYAQNAAAAEAAGAEIVTVAVRRVNLSDPSQPMLVDHVKPDRFTFLPNTA GCFTGEDAIRTLRLAREAGGWDLVKLEVLSNTKHLLPDMEETLRALKLLIADGFQVMVYCSDDPVYAKKLEEAGAAAIMP AAAPIGSGRGIQNALNLALIIEQAKVPVLVDAGVGTASDATIAMELGCDAVLMNTAIAEAKDPIRMARAMRHAVIAGREA YLAGRMPKRMYAEPSSPLSGLI
Specific function: Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S
COG id: COG2022
COG function: function code H; Uncharacterized enzyme of thiazole biosynthesis
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thiG family
Homologues:
Organism=Escherichia coli, GI48994993, Length=250, Percent_Identity=46, Blast_Score=208, Evalue=3e-55,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): THIG_PHEZH (B4RCS1)
Other databases:
- EMBL: CP000747 - RefSeq: YP_002130687.1 - ProteinModelPortal: B4RCS1 - GeneID: 6791362 - GenomeReviews: CP000747_GR - KEGG: pzu:PHZ_c1847 - HOGENOM: HBG296821 - OMA: VAIRRTN - ProtClustDB: PRK00208 - GO: GO:0005737 - HAMAP: MF_00443 - InterPro: IPR013785 - InterPro: IPR008867 - Gene3D: G3DSA:3.20.20.70
Pfam domain/function: PF05690 ThiG; SSF110399 ThiG
EC number: NA
Molecular weight: Translated: 27954; Mature: 27954
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: NA
Important sites: ACT_SITE 105-105 BINDING 166-166
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDGSVRSEDTWTVAGRTFRSRLIVGTGKYKDYAQNAAAAEAAGAEIVTVAVRRVNLSDPS CCCCCCCCCCEEEECHHEEEEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEEEECCCCCC QPMLVDHVKPDRFTFLPNTAGCFTGEDAIRTLRLAREAGGWDLVKLEVLSNTKHLLPDME CCEEEECCCCCCEEECCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCHHHCCCHH ETLRALKLLIADGFQVMVYCSDDPVYAKKLEEAGAAAIMPAAAPIGSGRGIQNALNLALI HHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHEEEE IEQAKVPVLVDAGVGTASDATIAMELGCDAVLMNTAIAEAKDPIRMARAMRHAVIAGREA EECCCCCEEEECCCCCCCCCEEEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCHH YLAGRMPKRMYAEPSSPLSGLI HHHCCCCHHHHCCCCCCCCCCC >Mature Secondary Structure MDGSVRSEDTWTVAGRTFRSRLIVGTGKYKDYAQNAAAAEAAGAEIVTVAVRRVNLSDPS CCCCCCCCCCEEEECHHEEEEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEEEECCCCCC QPMLVDHVKPDRFTFLPNTAGCFTGEDAIRTLRLAREAGGWDLVKLEVLSNTKHLLPDME CCEEEECCCCCCEEECCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCHHHCCCHH ETLRALKLLIADGFQVMVYCSDDPVYAKKLEEAGAAAIMPAAAPIGSGRGIQNALNLALI HHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHEEEE IEQAKVPVLVDAGVGTASDATIAMELGCDAVLMNTAIAEAKDPIRMARAMRHAVIAGREA EECCCCCEEEECCCCCCCCCEEEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCHH YLAGRMPKRMYAEPSSPLSGLI HHHCCCCHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: deoxyxylulose-5-phosphate; ThiS-COSH; L-tyrosine [C]
Specific reaction: deoxyxylulose-5-phosphate + ThiS-COSH + L-tyrosine = 4-methyl-5-(beta-hydroxyethyl)thiazole phosphate + 4-hydroxy-benzyl-alcohol + C1 of tyrosine + ThiS protein [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA