Click here to switch to the map view.

The map label for this gene is yqjC [H]

Identifier: 197105250

GI number: 197105250

Start: 2000916

End: 2001341

Strand: Reverse

Name: yqjC [H]

Synonym: PHZ_c1787

Alternate gene names: 197105250

Gene position: 2001341-2000916 (Counterclockwise)

Preceding gene: 197105251

Following gene: 197105249

Centisome position: 50.08

GC content: 65.49

Gene sequence:

>426_bases
ATGAAGATCGGGAAGCTGAACCACGTGGGCGTCGCCACGCCCTCCATCGAGCAGTCGGTCGCGCTGTATCGCGACGTGCT
GGGCGCCACGAAGATCGGCGAGAAGTTCGCCATGCCCGAGCAGGGCGTGTGGGTCTGTTTCGTGGACCTGCCGAACAGCC
AGATCGAGCTGATCGAGCCCCATGGCGACAACTCGCCGCTGAAGGGCTTCCTTGAAAAGAACCCGGCGGGCGGGCAGCAC
CACGTCTGCTTCGAGGTGGACGACATCATCGCCGCGCGCGACGACATGGCCGCCAAGGGCGCGACCGTGCTGAACAACGG
CCAGCCGCGCATCGGAGCCCACGGCACGCCGGTGATCTTCGTCCATCCGAAGAACATGGGCGGGGTGCTGGTGGAACTGA
TGGAGACCCCGAAGGGAGCCCACTGA

Upstream 100 bases:

>100_bases
ATCTGGGGCCGCCGGCCCGTGGTCGAGACGACGGTGCTGAGGATCTGACGTTCCGCTGCGTGATCTCGCGCCCGTTCCGC
AACCGGCGTATACCGCCCGC

Downstream 100 bases:

>100_bases
TGGGTCCGATCACCGCCATCGCGATCTACCTGACGATCTGGTGGGTCGTGCTGTTCGCCGTGCTGCCGTGGGGCGTGCAG
AGCCACTACGAGGCCGGCGT

Product: lactoylglutathione lyase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MKIGKLNHVGVATPSIEQSVALYRDVLGATKIGEKFAMPEQGVWVCFVDLPNSQIELIEPHGDNSPLKGFLEKNPAGGQH
HVCFEVDDIIAARDDMAAKGATVLNNGQPRIGAHGTPVIFVHPKNMGGVLVELMETPKGAH

Sequences:

>Translated_141_residues
MKIGKLNHVGVATPSIEQSVALYRDVLGATKIGEKFAMPEQGVWVCFVDLPNSQIELIEPHGDNSPLKGFLEKNPAGGQH
HVCFEVDDIIAARDDMAAKGATVLNNGQPRIGAHGTPVIFVHPKNMGGVLVELMETPKGAH
>Mature_141_residues
MKIGKLNHVGVATPSIEQSVALYRDVLGATKIGEKFAMPEQGVWVCFVDLPNSQIELIEPHGDNSPLKGFLEKNPAGGQH
HVCFEVDDIIAARDDMAAKGATVLNNGQPRIGAHGTPVIFVHPKNMGGVLVELMETPKGAH

Specific function: Unknown

COG id: COG0346

COG function: function code E; Lactoylglutathione lyase and related lyases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glyoxalase I family [H]

Homologues:

Organism=Homo sapiens, GI188035928, Length=131, Percent_Identity=51.9083969465649, Blast_Score=140, Evalue=3e-34,
Organism=Caenorhabditis elegans, GI17506387, Length=131, Percent_Identity=51.1450381679389, Blast_Score=134, Evalue=1e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004360
- InterPro:   IPR018146
- InterPro:   IPR017515 [H]

Pfam domain/function: PF00903 Glyoxalase [H]

EC number: NA

Molecular weight: Translated: 15084; Mature: 15084

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIGKLNHVGVATPSIEQSVALYRDVLGATKIGEKFAMPEQGVWVCFVDLPNSQIELIEP
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHCCCCCCEEEEEEECCCCEEEEECC
HGDNSPLKGFLEKNPAGGQHHVCFEVDDIIAARDDMAAKGATVLNNGQPRIGAHGTPVIF
CCCCCCCCHHCCCCCCCCCEEEEEEHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCEEE
VHPKNMGGVLVELMETPKGAH
EECCCCCHHHHHHHHCCCCCC
>Mature Secondary Structure
MKIGKLNHVGVATPSIEQSVALYRDVLGATKIGEKFAMPEQGVWVCFVDLPNSQIELIEP
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHCCCCCCEEEEEEECCCCEEEEECC
HGDNSPLKGFLEKNPAGGQHHVCFEVDDIIAARDDMAAKGATVLNNGQPRIGAHGTPVIF
CCCCCCCCHHCCCCCCCCCEEEEEEHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCEEE
VHPKNMGGVLVELMETPKGAH
EECCCCCHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]