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The map label for this gene is tsf

Identifier: 197105242

GI number: 197105242

Start: 1989542

End: 1990477

Strand: Reverse

Name: tsf

Synonym: PHZ_c1779

Alternate gene names: 197105242

Gene position: 1990477-1989542 (Counterclockwise)

Preceding gene: 197105243

Following gene: 197105241

Centisome position: 49.81

GC content: 68.48

Gene sequence:

>936_bases
ATGGCGGAGATCACCGCTGCGCTGGTCAAGGAACTGCGCGAAAAAACCGACGCGGGCATGATGGACTGCAAGAAGGCCCT
GCAGGAGAACAACGGCGACCTGGAAGCTGCGGCCGACTGGCTGCGCACCAAGGGCCTCTCCAAGGCGGCCAAGAAGTCCG
ATCGCGCCGCGGCTGAAGGCCTCGTCGCGGGCCTCGTGAGCGCCGACGGCAAGTCCGGCGTGCTGATCGAGCTGAACGCC
GAGACCGACTTCGTCGCCAAGAACGAGAAGTTCCAGGACGCCGCTCGCCGCATCGCCGCGACGGCCCTGGTGCACGAGGC
GCTGGAGACCCTGCACGAGGCCAAGACGGCCGAGGGCGAGGTGGTCAACGACCTGGTCACCGGCCTGATCGCCACGATCG
GCGAGAACATGCGCCTGCGCCGCAGCGAGCGCCTGAGGGTCGAGAACGGCGCCGTCGCCCTCTACCTGCACAACGTGCAG
GGCGAAGGCGTGGCCCGCCTCGGCGTGCTCGTCGCGCTGGAAGGCGCCGGCGACCAGGCGGTGCTGAAGGACGTGGGTCG
CAAGATCGCCATGCACGTGGCCGGCACCCCGACCCCGCCGCTGGCGCTCAACTCCAGCGATCTCGACCCCGAGGCCGTGG
CCAAGGAGCGCGAGATCCAGACCCAGACGGCGATGGAGTCGGGCAAGCCCCGCGAGATCGCCGAGAAGATGGTCGAGGGC
CGGATCCGCAAGTGGCAGGAAGAGGTCGTGCTCCTGAAGCAGCCCTTCGTCATGAATCCGGACCAGACGATCGAGGAGCT
GATCGCCGAGACCGCCAAGCAGGCGGGCGGCCCGGTGTCGGTGAAGGGCTTCGTCCGCTTCGCCCTGGGCGAAGGCGTCG
AGAAGAAGCAGGACGACTTCGCGGCCGAAGTGGCCTCGATGACCAGCGCCTCCTAG

Upstream 100 bases:

>100_bases
AGAACAAGCCGGCTAAGCCCCTCGGGGCCTGCCGACACGAAACTCTCACGGCGAGCCCTCATGAGGGGGCTCGTTCCGAT
TCAGACCAAAGGAGCCCACC

Downstream 100 bases:

>100_bases
GCGTTCGCCTGAAAGAGCCTTCAGGGGCGCGGCGCGTTCGACGCGCGCCGCGCCCTTGATGTATCTACCTTCCGCGTACC
AGAATCCCGGACCCGCCATG

Product: elongation factor EF-Ts

Products: NA

Alternate protein names: EF-Ts

Number of amino acids: Translated: 311; Mature: 310

Protein sequence:

>311_residues
MAEITAALVKELREKTDAGMMDCKKALQENNGDLEAAADWLRTKGLSKAAKKSDRAAAEGLVAGLVSADGKSGVLIELNA
ETDFVAKNEKFQDAARRIAATALVHEALETLHEAKTAEGEVVNDLVTGLIATIGENMRLRRSERLRVENGAVALYLHNVQ
GEGVARLGVLVALEGAGDQAVLKDVGRKIAMHVAGTPTPPLALNSSDLDPEAVAKEREIQTQTAMESGKPREIAEKMVEG
RIRKWQEEVVLLKQPFVMNPDQTIEELIAETAKQAGGPVSVKGFVRFALGEGVEKKQDDFAAEVASMTSAS

Sequences:

>Translated_311_residues
MAEITAALVKELREKTDAGMMDCKKALQENNGDLEAAADWLRTKGLSKAAKKSDRAAAEGLVAGLVSADGKSGVLIELNA
ETDFVAKNEKFQDAARRIAATALVHEALETLHEAKTAEGEVVNDLVTGLIATIGENMRLRRSERLRVENGAVALYLHNVQ
GEGVARLGVLVALEGAGDQAVLKDVGRKIAMHVAGTPTPPLALNSSDLDPEAVAKEREIQTQTAMESGKPREIAEKMVEG
RIRKWQEEVVLLKQPFVMNPDQTIEELIAETAKQAGGPVSVKGFVRFALGEGVEKKQDDFAAEVASMTSAS
>Mature_310_residues
AEITAALVKELREKTDAGMMDCKKALQENNGDLEAAADWLRTKGLSKAAKKSDRAAAEGLVAGLVSADGKSGVLIELNAE
TDFVAKNEKFQDAARRIAATALVHEALETLHEAKTAEGEVVNDLVTGLIATIGENMRLRRSERLRVENGAVALYLHNVQG
EGVARLGVLVALEGAGDQAVLKDVGRKIAMHVAGTPTPPLALNSSDLDPEAVAKEREIQTQTAMESGKPREIAEKMVEGR
IRKWQEEVVLLKQPFVMNPDQTIEELIAETAKQAGGPVSVKGFVRFALGEGVEKKQDDFAAEVASMTSAS

Specific function: Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome

COG id: COG0264

COG function: function code J; Translation elongation factor Ts

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the EF-Ts family

Homologues:

Organism=Homo sapiens, GI171846268, Length=310, Percent_Identity=30.6451612903226, Blast_Score=115, Evalue=7e-26,
Organism=Homo sapiens, GI291084500, Length=331, Percent_Identity=29.0030211480363, Blast_Score=108, Evalue=6e-24,
Organism=Homo sapiens, GI291084502, Length=130, Percent_Identity=39.2307692307692, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI291084498, Length=114, Percent_Identity=41.2280701754386, Blast_Score=79, Evalue=4e-15,
Organism=Escherichia coli, GI1786366, Length=313, Percent_Identity=46.3258785942492, Blast_Score=231, Evalue=4e-62,
Organism=Caenorhabditis elegans, GI17561440, Length=305, Percent_Identity=25.9016393442623, Blast_Score=88, Evalue=6e-18,
Organism=Drosophila melanogaster, GI19921466, Length=302, Percent_Identity=29.8013245033113, Blast_Score=102, Evalue=3e-22,

Paralogues:

None

Copy number: 2670 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1100 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). 4173 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 14563 Molecules/Cell In: Growth Phase, Gluco

Swissprot (AC and ID): EFTS_PHEZH (B4RBZ3)

Other databases:

- EMBL:   CP000747
- RefSeq:   YP_002130619.1
- GeneID:   6791292
- GenomeReviews:   CP000747_GR
- KEGG:   pzu:PHZ_c1779
- HOGENOM:   HBG713289
- OMA:   YLHGTRI
- GO:   GO:0005737
- HAMAP:   MF_00050
- InterPro:   IPR001816
- InterPro:   IPR014039
- InterPro:   IPR018101
- InterPro:   IPR009060
- InterPro:   IPR000449
- Gene3D:   G3DSA:3.30.479.20
- PANTHER:   PTHR11741
- TIGRFAMs:   TIGR00116

Pfam domain/function: PF00889 EF_TS; PF00627 UBA; SSF54713 EF_TS; SSF46934 UBA_like

EC number: NA

Molecular weight: Translated: 33276; Mature: 33145

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: PS01126 EF_TS_1; PS01127 EF_TS_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEITAALVKELREKTDAGMMDCKKALQENNGDLEAAADWLRTKGLSKAAKKSDRAAAEG
CCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHH
LVAGLVSADGKSGVLIELNAETDFVAKNEKFQDAARRIAATALVHEALETLHEAKTAEGE
HHHHHHHCCCCCCEEEEECCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
VVNDLVTGLIATIGENMRLRRSERLRVENGAVALYLHNVQGEGVARLGVLVALEGAGDQA
HHHHHHHHHHHHHCCCHHHHHHHCEEEECCEEEEEEECCCCCCHHHEEEEEEEECCCCHH
VLKDVGRKIAMHVAGTPTPPLALNSSDLDPEAVAKEREIQTQTAMESGKPREIAEKMVEG
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
RIRKWQEEVVLLKQPFVMNPDQTIEELIAETAKQAGGPVSVKGFVRFALGEGVEKKQDDF
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHH
AAEVASMTSAS
HHHHHHHHCCC
>Mature Secondary Structure 
AEITAALVKELREKTDAGMMDCKKALQENNGDLEAAADWLRTKGLSKAAKKSDRAAAEG
CHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHH
LVAGLVSADGKSGVLIELNAETDFVAKNEKFQDAARRIAATALVHEALETLHEAKTAEGE
HHHHHHHCCCCCCEEEEECCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
VVNDLVTGLIATIGENMRLRRSERLRVENGAVALYLHNVQGEGVARLGVLVALEGAGDQA
HHHHHHHHHHHHHCCCHHHHHHHCEEEECCEEEEEEECCCCCCHHHEEEEEEEECCCCHH
VLKDVGRKIAMHVAGTPTPPLALNSSDLDPEAVAKEREIQTQTAMESGKPREIAEKMVEG
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
RIRKWQEEVVLLKQPFVMNPDQTIEELIAETAKQAGGPVSVKGFVRFALGEGVEKKQDDF
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHH
AAEVASMTSAS
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA