Definition Phenylobacterium zucineum HLK1, complete genome.
Accession NC_011144
Length 3,996,255

Click here to switch to the map view.

The map label for this gene is 197105221

Identifier: 197105221

GI number: 197105221

Start: 1967345

End: 1968280

Strand: Direct

Name: 197105221

Synonym: PHZ_c1758

Alternate gene names: NA

Gene position: 1967345-1968280 (Clockwise)

Preceding gene: 197105220

Following gene: 197105222

Centisome position: 49.23

GC content: 72.22

Gene sequence:

>936_bases
GTGACGGCGGGGATCACCACAGACGAGACGCGGGACGAGATCACGGCGCGTGAGCGCGCGCTGGGGCGCCTCTCGTTCGC
CTTCATGCTCGACCAGGCGGCTCTGGGGGTCGGCGAGCTATCGACGATCGACTCGATCCTGGTGATGGCGATCAACCAGG
CCAACATCCAGCCGCTCACGCGCGAGCCGCTGGCCCGCATCCGCCATGGCCGGATGGAGACCCCCGCGCCCGACGCCCGG
CGCCGCCCCGTCAGCGTCAACGCCGTCGCGGCCTCGCTGCGCCTGCCGTTCGAGACCGTCCGCCGCCGCGTGCGCCGGCT
GGAGGCCCTGGGCGCGTGCGTGTCCGCCGACGGGGGGATCATCGTGCCCGAGACCTTCCTCGTCTCGCCCGGCTACGTCC
AGGGCGTGGCCGAAAGCCACCGGCTGCTCCGGGCGTTCTACTATGACGCCAGCGCCCAGGGGCTGGTCGAGCCCCTCCCC
CGCTCCGCCTATCCCCCGGAGCCGGCGATCCCCGTCCGCGCCGCGGCGCGCCTGCTCTCGGACTATGTGCTGCGCACGAC
GGACGAGTTGCTGGTGCGCGTCGAGGATCTTGTCTCGGCCGTGGTCCTCCTGGCGATCCTGGGCGGCGAGACGCGCACCA
CCAACGTGGCCCGGATCGCCAAGCGTCTGCGGATGCCGATGGAGACCGCCCGCCGGCACGTGCTCGAGCTGACCGAAAAG
GACTGCTGCGTCCGGTCGGCTAAGGGCGTGTCCGTACCTCCCGAGATGCTGGAGCGGCCCGAGTGGCGGGGCTTTCTCAG
GGACAACGCCGCCAACGTCCAGCGGCTGTTCGCGGGGCTATCCGAGCGGGGCGTGATCGAGGCGTGGAGTCGGCTCGCGC
CGCCGCTGCCGGCCGACGACGCTAAGGGGCTTCGGGCTTCTCCAGCGGGTGCGTGA

Upstream 100 bases:

>100_bases
AATGCGGGTAGGCCCGCGCTTGCATAACTTCGTCGGCTCGCGAACGTGATCGTGCGTTCGCCGACCGGCGCACGCCGGGA
TTCGATCGGGGATCGGACGA

Downstream 100 bases:

>100_bases
CGAGCGGCGGGGCCAGCACCATCGCCGTCGCGAACGCCAGGGTCGACACCGCCAGGAGCGCGGCGGCCGTCAACGCCGGC
CAGATCCGCTCACGCCGCAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 311; Mature: 310

Protein sequence:

>311_residues
MTAGITTDETRDEITARERALGRLSFAFMLDQAALGVGELSTIDSILVMAINQANIQPLTREPLARIRHGRMETPAPDAR
RRPVSVNAVAASLRLPFETVRRRVRRLEALGACVSADGGIIVPETFLVSPGYVQGVAESHRLLRAFYYDASAQGLVEPLP
RSAYPPEPAIPVRAAARLLSDYVLRTTDELLVRVEDLVSAVVLLAILGGETRTTNVARIAKRLRMPMETARRHVLELTEK
DCCVRSAKGVSVPPEMLERPEWRGFLRDNAANVQRLFAGLSERGVIEAWSRLAPPLPADDAKGLRASPAGA

Sequences:

>Translated_311_residues
MTAGITTDETRDEITARERALGRLSFAFMLDQAALGVGELSTIDSILVMAINQANIQPLTREPLARIRHGRMETPAPDAR
RRPVSVNAVAASLRLPFETVRRRVRRLEALGACVSADGGIIVPETFLVSPGYVQGVAESHRLLRAFYYDASAQGLVEPLP
RSAYPPEPAIPVRAAARLLSDYVLRTTDELLVRVEDLVSAVVLLAILGGETRTTNVARIAKRLRMPMETARRHVLELTEK
DCCVRSAKGVSVPPEMLERPEWRGFLRDNAANVQRLFAGLSERGVIEAWSRLAPPLPADDAKGLRASPAGA
>Mature_310_residues
TAGITTDETRDEITARERALGRLSFAFMLDQAALGVGELSTIDSILVMAINQANIQPLTREPLARIRHGRMETPAPDARR
RPVSVNAVAASLRLPFETVRRRVRRLEALGACVSADGGIIVPETFLVSPGYVQGVAESHRLLRAFYYDASAQGLVEPLPR
SAYPPEPAIPVRAAARLLSDYVLRTTDELLVRVEDLVSAVVLLAILGGETRTTNVARIAKRLRMPMETARRHVLELTEKD
CCVRSAKGVSVPPEMLERPEWRGFLRDNAANVQRLFAGLSERGVIEAWSRLAPPLPADDAKGLRASPAGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33985; Mature: 33853

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAGITTDETRDEITARERALGRLSFAFMLDQAALGVGELSTIDSILVMAINQANIQPLT
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCH
REPLARIRHGRMETPAPDARRRPVSVNAVAASLRLPFETVRRRVRRLEALGACVSADGGI
HHHHHHHHCCCCCCCCCCHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCE
IVPETFLVSPGYVQGVAESHRLLRAFYYDASAQGLVEPLPRSAYPPEPAIPVRAAARLLS
ECCHHHEECCHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHH
DYVLRTTDELLVRVEDLVSAVVLLAILGGETRTTNVARIAKRLRMPMETARRHVLELTEK
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHH
DCCVRSAKGVSVPPEMLERPEWRGFLRDNAANVQRLFAGLSERGVIEAWSRLAPPLPADD
HHHHHCCCCCCCCHHHHCCCCHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCC
AKGLRASPAGA
CCCCCCCCCCC
>Mature Secondary Structure 
TAGITTDETRDEITARERALGRLSFAFMLDQAALGVGELSTIDSILVMAINQANIQPLT
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCH
REPLARIRHGRMETPAPDARRRPVSVNAVAASLRLPFETVRRRVRRLEALGACVSADGGI
HHHHHHHHCCCCCCCCCCHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCE
IVPETFLVSPGYVQGVAESHRLLRAFYYDASAQGLVEPLPRSAYPPEPAIPVRAAARLLS
ECCHHHEECCHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHH
DYVLRTTDELLVRVEDLVSAVVLLAILGGETRTTNVARIAKRLRMPMETARRHVLELTEK
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHH
DCCVRSAKGVSVPPEMLERPEWRGFLRDNAANVQRLFAGLSERGVIEAWSRLAPPLPADD
HHHHHCCCCCCCCHHHHCCCCHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCC
AKGLRASPAGA
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA