| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197105217
Identifier: 197105217
GI number: 197105217
Start: 1962482
End: 1962895
Strand: Direct
Name: 197105217
Synonym: PHZ_c1754
Alternate gene names: NA
Gene position: 1962482-1962895 (Clockwise)
Preceding gene: 197105216
Following gene: 197105219
Centisome position: 49.11
GC content: 71.01
Gene sequence:
>414_bases ATGACCCAGCCCATCGTCGTCGCCGGCTTCGACCACATCGTGCTGCGCGTCCGCGACAAGGAGCGGATGCTCGCCTTCTA CTGCGGCGTGCTGGGGCTCTCGGTGGACCGCGACCGTCCGGAGATCGGACTCACCCACATCCGCTGCGGGCCGCAGATGA TCGACCTCGTCACGCTCGACGGCCCGCTGGGGCGGATGGGCGGCGCCGGGCCCGGCGCCGAGGGCCGCAACCTCGACCAT TTCGCCCTGCAGGTGCGTCCCTACGACGCCCAGGCGATCAAGGATCACCTGGCCGCTCACGGAGTCGCCGTGACGGACGA AGGCCCCCGCTACGGGGCCGACGGCGACGGCTGGTCGATCTACCTGCAGGACCCCGAGGGCAACACGGTCGAGCTGAAGG GCCCCGGAGCCTGA
Upstream 100 bases:
>100_bases CGCGGCCACATCCTGGAGGACGGCGAGCGGCGGGACGTGCGGCTGTTCGGCCTTCTGCTCTAGGCTGGGCGGCCCTATCT CCACGGCAGGGAGACCCGCC
Downstream 100 bases:
>100_bases GGGGGCCCTAGAGGGCGTTCACGATCCCGAGGAAGTCCTGCGCCTTCAGGGACGCGCCGCCCACCAGCGCGCCGCCCACC TCGTCGGCGTGCAGGATCTC
Product: lactoylglutathione lyase
Products: NA
Alternate protein names: Lactoylglutathione Lyase; Ring-Cleaving Dioxygenase; Glyoxalase Family Protein; Methylmalonyl CoA Epimerase; Dioxygenase Protein; Glyoxalase; Glyoxalase/Bleomycin Resistance; Dioxygenase
Number of amino acids: Translated: 137; Mature: 136
Protein sequence:
>137_residues MTQPIVVAGFDHIVLRVRDKERMLAFYCGVLGLSVDRDRPEIGLTHIRCGPQMIDLVTLDGPLGRMGGAGPGAEGRNLDH FALQVRPYDAQAIKDHLAAHGVAVTDEGPRYGADGDGWSIYLQDPEGNTVELKGPGA
Sequences:
>Translated_137_residues MTQPIVVAGFDHIVLRVRDKERMLAFYCGVLGLSVDRDRPEIGLTHIRCGPQMIDLVTLDGPLGRMGGAGPGAEGRNLDH FALQVRPYDAQAIKDHLAAHGVAVTDEGPRYGADGDGWSIYLQDPEGNTVELKGPGA >Mature_136_residues TQPIVVAGFDHIVLRVRDKERMLAFYCGVLGLSVDRDRPEIGLTHIRCGPQMIDLVTLDGPLGRMGGAGPGAEGRNLDHF ALQVRPYDAQAIKDHLAAHGVAVTDEGPRYGADGDGWSIYLQDPEGNTVELKGPGA
Specific function: Unknown
COG id: COG0346
COG function: function code E; Lactoylglutathione lyase and related lyases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14703; Mature: 14572
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQPIVVAGFDHIVLRVRDKERMLAFYCGVLGLSVDRDRPEIGLTHIRCGPQMIDLVTLD CCCCEEEECCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCEEEEEEEC GPLGRMGGAGPGAEGRNLDHFALQVRPYDAQAIKDHLAAHGVAVTDEGPRYGADGDGWSI CCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHCCEEECCCCCCCCCCCCCEEE YLQDPEGNTVELKGPGA EEECCCCCEEEEECCCC >Mature Secondary Structure TQPIVVAGFDHIVLRVRDKERMLAFYCGVLGLSVDRDRPEIGLTHIRCGPQMIDLVTLD CCCEEEECCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCEEEEEEEC GPLGRMGGAGPGAEGRNLDHFALQVRPYDAQAIKDHLAAHGVAVTDEGPRYGADGDGWSI CCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHCCEEECCCCCCCCCCCCCEEE YLQDPEGNTVELKGPGA EEECCCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA