| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197105136
Identifier: 197105136
GI number: 197105136
Start: 1877617
End: 1878528
Strand: Direct
Name: 197105136
Synonym: PHZ_c1673
Alternate gene names: NA
Gene position: 1877617-1878528 (Clockwise)
Preceding gene: 197105135
Following gene: 197105139
Centisome position: 46.98
GC content: 68.64
Gene sequence:
>912_bases ATGATCCAAGGCCACAGCTACGAGCGCCTGCTCGAGATCTCGAAGCGCGTGAACTGGCGCGTCGAGGACATCATCGGCCC CGACAAGCCGATGGACTTCAGCAAGCCCTTCCTGCCCGAGACCTTCGCCCGCACCGGCGAACTGGACTTCCTGAGCCCGG CCGAGCGGCTGAAGCTCAACCAGATCCGCGGCTTCGGCTACCTGGCCATGTTCGAGCTGGTCGAGCGCTGCATCCTGCCG GCGATCGAGGAGCACGTGCCTTCCCGGCCCGGCCAGGACCCCCATCGCACGGCGGCCCTGCAGAACTTCGCCCACGAGGA AGCCAAGCACATCGAGCTCTTCGTCCGGTTCCGGAAGGCGTTCACCGACGGCTTCGACGTGGCCTGCGGCGTCATCGGCC CGGCCGAGGACATCGGCGCCGCGATCCGCGGCCACGGCAAGCTGGGCGTCGCGCTCTTCGTCCTCGCCATCGAATGGGCG ACCCAGCAGCACTGGCTGGAGAGCGTGCAGGACGACGAGGGGCTCGATCCGCAGATCAAGAGCCTCCTTCGGCACCACTG GATGGAGGAATCCCAGCACGCGAAGCTCGACGCCCTGGTCTTCTACGAACTCGCCGAGAAGGCCGGTCCTGACGGTGTCA TGCAGGCGGTGGAGGAGTTCCTGCGGATCGGCGCCTTCATCGACGGCGGCCTGGCCCAGCAGGCCGAGCTCGACCTCGAC GCCTTCGAGCGCGCCACGGGCCGGCGGCTCACCGGCGGCCAGCGCGCGCAGTTCATCGCCAGCCAGCACCAGGCCCAGCG CTGGACCTTCCTGGGCTCGGCGCTCGTCAACCAGGGCTTCCTGAAGGCGCTGGGGGAGATCAGCCCCGCGGGCCGGGCCA GGCTGGAAGAGGTTGCGCCGGCCTTCTGTTAG
Upstream 100 bases:
>100_bases CAGATCATCGACCCGACAACCGCCAACAACTGACGGCGGCTGCTCCACCCGCCGCGGCTGCGCCCTCGGAGGGCGCGGCG CCGCGCGAGGAGAAACGACT
Downstream 100 bases:
>100_bases GCCCGCGACGACGGGAGCGCCGGCAGGAATACCCGAGCCGGCCGGCGCTCTTCGTCAGGACTCTTCCGTCAGGATTCGGC GGCCTCGCTCAGGCCTTCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 303; Mature: 303
Protein sequence:
>303_residues MIQGHSYERLLEISKRVNWRVEDIIGPDKPMDFSKPFLPETFARTGELDFLSPAERLKLNQIRGFGYLAMFELVERCILP AIEEHVPSRPGQDPHRTAALQNFAHEEAKHIELFVRFRKAFTDGFDVACGVIGPAEDIGAAIRGHGKLGVALFVLAIEWA TQQHWLESVQDDEGLDPQIKSLLRHHWMEESQHAKLDALVFYELAEKAGPDGVMQAVEEFLRIGAFIDGGLAQQAELDLD AFERATGRRLTGGQRAQFIASQHQAQRWTFLGSALVNQGFLKALGEISPAGRARLEEVAPAFC
Sequences:
>Translated_303_residues MIQGHSYERLLEISKRVNWRVEDIIGPDKPMDFSKPFLPETFARTGELDFLSPAERLKLNQIRGFGYLAMFELVERCILP AIEEHVPSRPGQDPHRTAALQNFAHEEAKHIELFVRFRKAFTDGFDVACGVIGPAEDIGAAIRGHGKLGVALFVLAIEWA TQQHWLESVQDDEGLDPQIKSLLRHHWMEESQHAKLDALVFYELAEKAGPDGVMQAVEEFLRIGAFIDGGLAQQAELDLD AFERATGRRLTGGQRAQFIASQHQAQRWTFLGSALVNQGFLKALGEISPAGRARLEEVAPAFC >Mature_303_residues MIQGHSYERLLEISKRVNWRVEDIIGPDKPMDFSKPFLPETFARTGELDFLSPAERLKLNQIRGFGYLAMFELVERCILP AIEEHVPSRPGQDPHRTAALQNFAHEEAKHIELFVRFRKAFTDGFDVACGVIGPAEDIGAAIRGHGKLGVALFVLAIEWA TQQHWLESVQDDEGLDPQIKSLLRHHWMEESQHAKLDALVFYELAEKAGPDGVMQAVEEFLRIGAFIDGGLAQQAELDLD AFERATGRRLTGGQRAQFIASQHQAQRWTFLGSALVNQGFLKALGEISPAGRARLEEVAPAFC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33895; Mature: 33895
Theoretical pI: Translated: 5.40; Mature: 5.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQGHSYERLLEISKRVNWRVEDIIGPDKPMDFSKPFLPETFARTGELDFLSPAERLKLN CCCCCHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHH QIRGFGYLAMFELVERCILPAIEEHVPSRPGQDPHRTAALQNFAHEEAKHIELFVRFRKA HHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH FTDGFDVACGVIGPAEDIGAAIRGHGKLGVALFVLAIEWATQQHWLESVQDDEGLDPQIK HCCCCHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH SLLRHHWMEESQHAKLDALVFYELAEKAGPDGVMQAVEEFLRIGAFIDGGLAQQAELDLD HHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHCCHH AFERATGRRLTGGQRAQFIASQHQAQRWTFLGSALVNQGFLKALGEISPAGRARLEEVAP HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCC AFC CCC >Mature Secondary Structure MIQGHSYERLLEISKRVNWRVEDIIGPDKPMDFSKPFLPETFARTGELDFLSPAERLKLN CCCCCHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHH QIRGFGYLAMFELVERCILPAIEEHVPSRPGQDPHRTAALQNFAHEEAKHIELFVRFRKA HHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH FTDGFDVACGVIGPAEDIGAAIRGHGKLGVALFVLAIEWATQQHWLESVQDDEGLDPQIK HCCCCHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH SLLRHHWMEESQHAKLDALVFYELAEKAGPDGVMQAVEEFLRIGAFIDGGLAQQAELDLD HHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHCCHH AFERATGRRLTGGQRAQFIASQHQAQRWTFLGSALVNQGFLKALGEISPAGRARLEEVAP HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCC AFC CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA