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The map label for this gene is msrB [H]

Identifier: 197105113

GI number: 197105113

Start: 1858362

End: 1858853

Strand: Reverse

Name: msrB [H]

Synonym: PHZ_c1650

Alternate gene names: 197105113

Gene position: 1858853-1858362 (Counterclockwise)

Preceding gene: 197105114

Following gene: 197105108

Centisome position: 46.51

GC content: 72.56

Gene sequence:

>492_bases
ATGAGCGCGAATGTCGATCGCCGCGGCTTCCTGCTGGGGGCCTCCCTCGTCGCCATCGGCGTGACGCCGGGCTCGGCCGG
GGCGGCCGACGCCTGGGCCGACTCGCCGTTCCGCAGGCTCACCGACGCCGAGTGGAAGCGCAGGCTTCCGGGCCCGGCCT
ACCGCGTGCTCCGCCACGAGGACACCGAGCGCCCGGGCTCCAGCCCCCTGAACCGTGAGAAGCGCAAGGGCGCGTACCAG
TGCGCCGGCTGCGGCCTGCCGCTGTTCAAGTCGGACTGGAAGTTCGAGAGCGGCACCGGCTGGCCCAGCTTCTACCGCGC
CATGCCGGGCGCGGTGGCCACCAAGACCGACTACCGGATCGGCATTCCCCGCACCGAGTATCACTGCGCCCGCTGCCTGG
GCCACCAGGGCCACGTCTTCGACGACGGGCCCAGGCCGACGGGGCTGCGCTACTGCAACAACGGCCTGGCGCTGAGGTTC
GTCCCGGCCTGA

Upstream 100 bases:

>100_bases
GGGAGCGGCGGTGCAGAACCTCAATCTGATGCTGGGCCTCGACGAAGGCGCGGGCCTGTAGCGCTTGCATCCGGACGCGC
CTGGGCCACGTAATCGGGGC

Downstream 100 bases:

>100_bases
CGCGGCGCAAAAGAAGCGGGCCCGCGGGGGAGCGCGGGCCCGAGGAAGCGCAAACTGGCTTGGGGATCAGTCTGCGGGGA
AAGGCTCAGGTCCTGGTCTT

Product: methionine sulfoxide reductase B

Products: NA

Alternate protein names: Peptide-methionine (R)-S-oxide reductase [H]

Number of amino acids: Translated: 163; Mature: 162

Protein sequence:

>163_residues
MSANVDRRGFLLGASLVAIGVTPGSAGAADAWADSPFRRLTDAEWKRRLPGPAYRVLRHEDTERPGSSPLNREKRKGAYQ
CAGCGLPLFKSDWKFESGTGWPSFYRAMPGAVATKTDYRIGIPRTEYHCARCLGHQGHVFDDGPRPTGLRYCNNGLALRF
VPA

Sequences:

>Translated_163_residues
MSANVDRRGFLLGASLVAIGVTPGSAGAADAWADSPFRRLTDAEWKRRLPGPAYRVLRHEDTERPGSSPLNREKRKGAYQ
CAGCGLPLFKSDWKFESGTGWPSFYRAMPGAVATKTDYRIGIPRTEYHCARCLGHQGHVFDDGPRPTGLRYCNNGLALRF
VPA
>Mature_162_residues
SANVDRRGFLLGASLVAIGVTPGSAGAADAWADSPFRRLTDAEWKRRLPGPAYRVLRHEDTERPGSSPLNREKRKGAYQC
AGCGLPLFKSDWKFESGTGWPSFYRAMPGAVATKTDYRIGIPRTEYHCARCLGHQGHVFDDGPRPTGLRYCNNGLALRFV
PA

Specific function: Unknown

COG id: COG0229

COG function: function code O; Conserved domain frequently associated with peptide methionine sulfoxide reductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the msrB Met sulfoxide reductase family [H]

Homologues:

Organism=Homo sapiens, GI301336164, Length=125, Percent_Identity=44.8, Blast_Score=117, Evalue=4e-27,
Organism=Homo sapiens, GI301336162, Length=125, Percent_Identity=44.8, Blast_Score=117, Evalue=4e-27,
Organism=Homo sapiens, GI73089054, Length=125, Percent_Identity=44.8, Blast_Score=117, Evalue=4e-27,
Organism=Homo sapiens, GI37620216, Length=125, Percent_Identity=44.8, Blast_Score=116, Evalue=7e-27,
Organism=Homo sapiens, GI117606353, Length=131, Percent_Identity=40.4580152671756, Blast_Score=101, Evalue=3e-22,
Organism=Escherichia coli, GI1788077, Length=119, Percent_Identity=42.8571428571429, Blast_Score=100, Evalue=9e-23,
Organism=Caenorhabditis elegans, GI115532676, Length=126, Percent_Identity=41.2698412698413, Blast_Score=100, Evalue=4e-22,
Organism=Caenorhabditis elegans, GI17553450, Length=126, Percent_Identity=41.2698412698413, Blast_Score=100, Evalue=4e-22,
Organism=Saccharomyces cerevisiae, GI6319816, Length=127, Percent_Identity=37.007874015748, Blast_Score=83, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24645799, Length=128, Percent_Identity=42.96875, Blast_Score=103, Evalue=4e-23,
Organism=Drosophila melanogaster, GI45553335, Length=128, Percent_Identity=42.96875, Blast_Score=103, Evalue=4e-23,
Organism=Drosophila melanogaster, GI21356369, Length=128, Percent_Identity=42.96875, Blast_Score=103, Evalue=4e-23,
Organism=Drosophila melanogaster, GI221378664, Length=126, Percent_Identity=41.2698412698413, Blast_Score=102, Evalue=1e-22,
Organism=Drosophila melanogaster, GI221378662, Length=133, Percent_Identity=39.0977443609023, Blast_Score=100, Evalue=4e-22,
Organism=Drosophila melanogaster, GI24645801, Length=139, Percent_Identity=39.568345323741, Blast_Score=100, Evalue=7e-22,
Organism=Drosophila melanogaster, GI24645804, Length=137, Percent_Identity=40.1459854014599, Blast_Score=99, Evalue=9e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002579
- InterPro:   IPR011057 [H]

Pfam domain/function: PF01641 SelR [H]

EC number: =1.8.4.12 [H]

Molecular weight: Translated: 17925; Mature: 17794

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSANVDRRGFLLGASLVAIGVTPGSAGAADAWADSPFRRLTDAEWKRRLPGPAYRVLRHE
CCCCCCCCEEEEECEEEEEECCCCCCCCCCCCCCCHHHHHCCHHHHHCCCCHHHHHHHCC
DTERPGSSPLNREKRKGAYQCAGCGLPLFKSDWKFESGTGWPSFYRAMPGAVATKTDYRI
CCCCCCCCCCCHHHHCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEECCCCCEE
GIPRTEYHCARCLGHQGHVFDDGPRPTGLRYCNNGLALRFVPA
CCCCCHHHHHHHHCCCCCEECCCCCCCCCEEECCCCEEEEECC
>Mature Secondary Structure 
SANVDRRGFLLGASLVAIGVTPGSAGAADAWADSPFRRLTDAEWKRRLPGPAYRVLRHE
CCCCCCCEEEEECEEEEEECCCCCCCCCCCCCCCHHHHHCCHHHHHCCCCHHHHHHHCC
DTERPGSSPLNREKRKGAYQCAGCGLPLFKSDWKFESGTGWPSFYRAMPGAVATKTDYRI
CCCCCCCCCCCHHHHCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEECCCCCEE
GIPRTEYHCARCLGHQGHVFDDGPRPTGLRYCNNGLALRFVPA
CCCCCHHHHHHHHCCCCCEECCCCCCCCCEEECCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA