| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is kynB [H]
Identifier: 197105057
GI number: 197105057
Start: 1797940
End: 1798593
Strand: Direct
Name: kynB [H]
Synonym: PHZ_c1594
Alternate gene names: 197105057
Gene position: 1797940-1798593 (Clockwise)
Preceding gene: 197105056
Following gene: 197105061
Centisome position: 44.99
GC content: 72.32
Gene sequence:
>654_bases ATGCCGCGCTTCGTCGAGATCAGCCATGTGATCGAGGAGGGCATGACCACCTATCCGGGCCTGCCGACGCCGAAGATCGA GGTGCTGGTGGATCACGAGGGCTCGCGCGAACGCTACCAGGGCCAGTCCGAGTTCCTGATCGCCTCGCTGCACCTGTGCG GCAACACCGGGACCTATGTGGACGCGCCGATCCACCGGCATCGGCACGGCGCCGACCTGGCGGACCTGCCGCTGGAGCGG GTCGCCGACCTGCCGGTGCGGGTGTTCGACGCCCGCGCCGAAGGGCGGGCGATCGGCCCCGAGCTGTTCCGCGGCCAGGA CCTCGACGGCGCCGCCGTGCTGGTGCGCACCGACTTCAGCCGCCACTGGCGGACCGAGCGCTACGGGCGGGACAACCCGT TCCTGACCGCCCAGGCCTGCCTGCGGCTGGTGGAGGCCGGCGCGGCCTTCGTCGGCATCGACTCGGTGAACATCGACGAC CTCGCCGACCTGGCCCGGCCCGCGCACACGATCCTGCTGGGCGCGGGGATCCCGATCTGCGAGCACCTGACGAACCTCGA GGCGTTACAGCCCGAGGGCGGGCGGCTGCACGCCGCGCCCATCGCGTGGCGGGGCGGGGCGACGTTCCCGGTGCGCGCCT ACGTCCGGTACTAG
Upstream 100 bases:
>100_bases CCTGCCGCGCCGCGCGGTGCTGTGCGGCCTCGCCACGGCGAGCGCGAGGCCGTCGGGCGCCAGCGCCAGCCCCGGGCCCA GCCAGGAAAGGACCCCGCCC
Downstream 100 bases:
>100_bases GCGCCCGCTACCGGCGCGCCGGGCCCAGGCGCATGAGGCCGAGGTCCACCGCCTCGGTGAGGGCCTCGCCCAGCGTGGCG CCGCCGAGCGCCGAGGGGGT
Product: hypothetical protein
Products: NA
Alternate protein names: KFA; N-formylkynurenine formamidase [H]
Number of amino acids: Translated: 217; Mature: 216
Protein sequence:
>217_residues MPRFVEISHVIEEGMTTYPGLPTPKIEVLVDHEGSRERYQGQSEFLIASLHLCGNTGTYVDAPIHRHRHGADLADLPLER VADLPVRVFDARAEGRAIGPELFRGQDLDGAAVLVRTDFSRHWRTERYGRDNPFLTAQACLRLVEAGAAFVGIDSVNIDD LADLARPAHTILLGAGIPICEHLTNLEALQPEGGRLHAAPIAWRGGATFPVRAYVRY
Sequences:
>Translated_217_residues MPRFVEISHVIEEGMTTYPGLPTPKIEVLVDHEGSRERYQGQSEFLIASLHLCGNTGTYVDAPIHRHRHGADLADLPLER VADLPVRVFDARAEGRAIGPELFRGQDLDGAAVLVRTDFSRHWRTERYGRDNPFLTAQACLRLVEAGAAFVGIDSVNIDD LADLARPAHTILLGAGIPICEHLTNLEALQPEGGRLHAAPIAWRGGATFPVRAYVRY >Mature_216_residues PRFVEISHVIEEGMTTYPGLPTPKIEVLVDHEGSRERYQGQSEFLIASLHLCGNTGTYVDAPIHRHRHGADLADLPLERV ADLPVRVFDARAEGRAIGPELFRGQDLDGAAVLVRTDFSRHWRTERYGRDNPFLTAQACLRLVEAGAAFVGIDSVNIDDL ADLARPAHTILLGAGIPICEHLTNLEALQPEGGRLHAAPIAWRGGATFPVRAYVRY
Specific function: Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine [H]
COG id: COG1878
COG function: function code R; Predicted metal-dependent hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the kynB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007325 [H]
Pfam domain/function: PF04199 Cyclase [H]
EC number: =3.5.1.9 [H]
Molecular weight: Translated: 23903; Mature: 23772
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRFVEISHVIEEGMTTYPGLPTPKIEVLVDHEGSRERYQGQSEFLIASLHLCGNTGTYV CCCEEHHHHHHHCCCCCCCCCCCCEEEEEEECCCCHHHHCCCCCEEEEEEEEECCCCCEE DAPIHRHRHGADLADLPLERVADLPVRVFDARAEGRAIGPELFRGQDLDGAAVLVRTDFS CCCHHHCCCCCCHHHCCHHHHHCCCEEEEECCCCCCCCCHHHHCCCCCCCCEEEEEECCH RHWRTERYGRDNPFLTAQACLRLVEAGAAFVGIDSVNIDDLADLARPAHTILLGAGIPIC HHHHHHHCCCCCCEEHHHHHHHHHHCCCEEEEECCCCHHHHHHHHCCHHEEEEECCCHHH EHLTNLEALQPEGGRLHAAPIAWRGGATFPVRAYVRY HHHCCCHHCCCCCCEEEECCEEECCCCCCEEEEEEEC >Mature Secondary Structure PRFVEISHVIEEGMTTYPGLPTPKIEVLVDHEGSRERYQGQSEFLIASLHLCGNTGTYV CCEEHHHHHHHCCCCCCCCCCCCEEEEEEECCCCHHHHCCCCCEEEEEEEEECCCCCEE DAPIHRHRHGADLADLPLERVADLPVRVFDARAEGRAIGPELFRGQDLDGAAVLVRTDFS CCCHHHCCCCCCHHHCCHHHHHCCCEEEEECCCCCCCCCHHHHCCCCCCCCEEEEEECCH RHWRTERYGRDNPFLTAQACLRLVEAGAAFVGIDSVNIDDLADLARPAHTILLGAGIPIC HHHHHHHCCCCCCEEHHHHHHHHHHCCCEEEEECCCCHHHHHHHHCCHHEEEEECCCHHH EHLTNLEALQPEGGRLHAAPIAWRGGATFPVRAYVRY HHHCCCHHCCCCCCEEEECCEEECCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA