| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197105055
Identifier: 197105055
GI number: 197105055
Start: 1795198
End: 1796760
Strand: Direct
Name: 197105055
Synonym: PHZ_c1592
Alternate gene names: NA
Gene position: 1795198-1796760 (Clockwise)
Preceding gene: 197105054
Following gene: 197105056
Centisome position: 44.92
GC content: 71.53
Gene sequence:
>1563_bases GTGCTCGCGCCACCGCAGGCGCGCCCCGCCGTCGGGCTCGAGGGCCCAGGTCACCTCGAGGACTCCGCCGTCCGCGCTCA GCGCGCCGTACTTGGCCGCGTTGGTCGCCAGTTCGTGGACAATCATGCCGAGCGCCAGCGCCCGGGTCGCGTCGAGGTGG ATGACGGGCCCGTCCAGAGAGACCCGCTCGGCGTAGGGCTCGAGCTCGCCGCGCACCACGGCGCGCAGGTCGGCGCTGCT CCAGGCGCGGGCGGTGAGCACGTCGTGGGTGCGGGCGAGGGCCACCAGCCGCCCCTCGAAATCGCGGATGAAGGTCGCCA TGTCGGGCGCGTTGCGGGCCGTCTGCGTCGCCATGGACTGCACGGTGGCCAGGTTGTTCTTCACCCGGTGATTGAGTTCG TTGAGCAGGAGCTGCTGCTTCTCGGTGAAGACGGTGCGCTCGGTCACGTCGCTGCCCTGGGTGATGATGCCGGTGACGCG GCCCTCCTCGTCCCGGATGGGCTGGTAGATGAAGTCCACGTAGCGCATCTGGACCTCCCCGCCGGGCGCGTGCTGCAGCG GCACGGCCAGCGCGCTGCCGGCGAACGGCTCGCCGGTGGAGAAGACCCGGTCGAGGACCTCGAACAGCCCGGTTGGGGCG ACCTCGGGCAGGGCCTCGCGAGCCGGCACTCCGATCACGTCGCGGTGCCCGATGAGTTGGCGGTAGGCGGCGTTGGCCAG GCTGAAGACGTGGTCCGGCCCATCCAGCACGGCCACGAAGCCCGGCGCCTTCTCGAACAGCGCAAACAGCCGCTCGCCCT GTTCGCGGTAGCGCTGCTCGCTCGCGGCGAGCGCTTCCACCGCCTCGCGCAGGCGGTTCTCGGCCAGCACCCGGCCGGTG GTCTCGATGCAGGTGCAGAACATGCCCCTCACCGCGCCGGTCTCGTCGGGCAGGGGACTGTAGGTGAAGGTGAAGAAGGT CGGCTCGGGATAGCCGTGGCGCTGCATCAGGAGGGGCAGGTCCTCCTGCCAGACGCCCTGGCCGTCGAGCGCCGAGCGGA CCAGGGGCTCCAGGTCGGGCCAGATCTCGGCCCAGATCTCCTGGAACCGCAGGCCGAGGGCGGCGGGGTGCCGGGCGCCC AGGATCGGCGCGTAGGCGTCGTTGTAGATGAAGGCGAGCTCGGGGCCCCAGGCGATGAACATCGGCTGCTGGGTGTTCAG CATCATCGCCGTGGCGGTCCGCAGGGCCTGGGGCCAGGCGGCGGGGTCGCCGAGCGGCGAGCGCGACCAGTCGTGGGCGC GCATGAGCGCGCCCATCGCCCCGCCGCCCTGGAGGAAGCTCGGAACCGTCACCGGACGCCGCGCGCTATCGCGCGCGCCG GAGCCCCAAGCGGCGCCTTGCGCCACGAGCCTGCCGGCCATCTCCGCGTCATGCTGGTCCCCCGCACCGTCGGCGTCCGG AGGAGAACGCACAACCCCGCCCAATGGTTTAGCCGCGGCGGCGTGCAGCATTGCCGTGGCGTGTTTCGGACCTTACAGCC CAAGGCCGTTCATCCGTTTCCGGCGTCCCAATGTCCAGCGTAA
Upstream 100 bases:
>100_bases AGTCGATACGCATGGAGCCGCGCAGGTCTCCGGCGCTGAGCTTCTCCATCAGCCGGGCGCCGAACCCCTGGCGCGTGGGG GAAACGACGGGCGGCCCGTC
Downstream 100 bases:
>100_bases CGGCCCGCGAGTTCGCGCCGGCCCCCTCCATGTCCGAGTACATCCAGGGGCTGCTGGAGGAGACGCCGGAGGTCCGGGAT TCCGAACGGCAGCGCCTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 520; Mature: 520
Protein sequence:
>520_residues MLAPPQARPAVGLEGPGHLEDSAVRAQRAVLGRVGRQFVDNHAERQRPGRVEVDDGPVQRDPLGVGLELAAHHGAQVGAA PGAGGEHVVGAGEGHQPPLEIADEGRHVGRVAGRLRRHGLHGGQVVLHPVIEFVEQELLLLGEDGALGHVAALGDDAGDA ALLVPDGLVDEVHVAHLDLPAGRVLQRHGQRAAGERLAGGEDPVEDLEQPGWGDLGQGLASRHSDHVAVPDELAVGGVGQ AEDVVRPIQHGHEARRLLEQRKQPLALFAVALLARGERFHRLAQAVLGQHPAGGLDAGAEHAPHRAGLVGQGTVGEGEEG RLGIAVALHQEGQVLLPDALAVERRADQGLQVGPDLGPDLLEPQAEGGGVPGAQDRRVGVVVDEGELGAPGDEHRLLGVQ HHRRGGPQGLGPGGGVAERRARPVVGAHERAHRPAALEEARNRHRTPRAIARAGAPSGALRHEPAGHLRVMLVPRTVGVR RRTHNPAQWFSRGGVQHCRGVFRTLQPKAVHPFPASQCPA
Sequences:
>Translated_520_residues MLAPPQARPAVGLEGPGHLEDSAVRAQRAVLGRVGRQFVDNHAERQRPGRVEVDDGPVQRDPLGVGLELAAHHGAQVGAA PGAGGEHVVGAGEGHQPPLEIADEGRHVGRVAGRLRRHGLHGGQVVLHPVIEFVEQELLLLGEDGALGHVAALGDDAGDA ALLVPDGLVDEVHVAHLDLPAGRVLQRHGQRAAGERLAGGEDPVEDLEQPGWGDLGQGLASRHSDHVAVPDELAVGGVGQ AEDVVRPIQHGHEARRLLEQRKQPLALFAVALLARGERFHRLAQAVLGQHPAGGLDAGAEHAPHRAGLVGQGTVGEGEEG RLGIAVALHQEGQVLLPDALAVERRADQGLQVGPDLGPDLLEPQAEGGGVPGAQDRRVGVVVDEGELGAPGDEHRLLGVQ HHRRGGPQGLGPGGGVAERRARPVVGAHERAHRPAALEEARNRHRTPRAIARAGAPSGALRHEPAGHLRVMLVPRTVGVR RRTHNPAQWFSRGGVQHCRGVFRTLQPKAVHPFPASQCPA >Mature_520_residues MLAPPQARPAVGLEGPGHLEDSAVRAQRAVLGRVGRQFVDNHAERQRPGRVEVDDGPVQRDPLGVGLELAAHHGAQVGAA PGAGGEHVVGAGEGHQPPLEIADEGRHVGRVAGRLRRHGLHGGQVVLHPVIEFVEQELLLLGEDGALGHVAALGDDAGDA ALLVPDGLVDEVHVAHLDLPAGRVLQRHGQRAAGERLAGGEDPVEDLEQPGWGDLGQGLASRHSDHVAVPDELAVGGVGQ AEDVVRPIQHGHEARRLLEQRKQPLALFAVALLARGERFHRLAQAVLGQHPAGGLDAGAEHAPHRAGLVGQGTVGEGEEG RLGIAVALHQEGQVLLPDALAVERRADQGLQVGPDLGPDLLEPQAEGGGVPGAQDRRVGVVVDEGELGAPGDEHRLLGVQ HHRRGGPQGLGPGGGVAERRARPVVGAHERAHRPAALEEARNRHRTPRAIARAGAPSGALRHEPAGHLRVMLVPRTVGVR RRTHNPAQWFSRGGVQHCRGVFRTLQPKAVHPFPASQCPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54511; Mature: 54511
Theoretical pI: Translated: 6.88; Mature: 6.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAPPQARPAVGLEGPGHLEDSAVRAQRAVLGRVGRQFVDNHAERQRPGRVEVDDGPVQR CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCC DPLGVGLELAAHHGAQVGAAPGAGGEHVVGAGEGHQPPLEIADEGRHVGRVAGRLRRHGL CCCCCCHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHCCHHHHHHHHHHHHCCC HGGQVVLHPVIEFVEQELLLLGEDGALGHVAALGDDAGDAALLVPDGLVDEVHVAHLDLP CCCHHHHHHHHHHHHHHHEEECCCCCCEEEEECCCCCCCEEEECCCCCCCCHHHEEECCC AGRVLQRHGQRAAGERLAGGEDPVEDLEQPGWGDLGQGLASRHSDHVAVPDELAVGGVGQ HHHHHHHHCHHHHHHHCCCCCCCHHHHCCCCCCHHHHHHHHCCCCCCCCCHHHCCCCCCC AEDVVRPIQHGHEARRLLEQRKQPLALFAVALLARGERFHRLAQAVLGQHPAGGLDAGAE HHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCC HAPHRAGLVGQGTVGEGEEGRLGIAVALHQEGQVLLPDALAVERRADQGLQVGPDLGPDL CCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEECCHHHHHHHHHCCCCCCCCCCCHHH LEPQAEGGGVPGAQDRRVGVVVDEGELGAPGDEHRLLGVQHHRRGGPQGLGPGGGVAERR CCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCEECHHHHCCCCCCCCCCCCCHHHHH ARPVVGAHERAHRPAALEEARNRHRTPRAIARAGAPSGALRHEPAGHLRVMLVPRTVGVR CCCCCCCHHHHCCCHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCHH RRTHNPAQWFSRGGVQHCRGVFRTLQPKAVHPFPASQCPA HCCCCHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MLAPPQARPAVGLEGPGHLEDSAVRAQRAVLGRVGRQFVDNHAERQRPGRVEVDDGPVQR CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCC DPLGVGLELAAHHGAQVGAAPGAGGEHVVGAGEGHQPPLEIADEGRHVGRVAGRLRRHGL CCCCCCHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHCCHHHHHHHHHHHHCCC HGGQVVLHPVIEFVEQELLLLGEDGALGHVAALGDDAGDAALLVPDGLVDEVHVAHLDLP CCCHHHHHHHHHHHHHHHEEECCCCCCEEEEECCCCCCCEEEECCCCCCCCHHHEEECCC AGRVLQRHGQRAAGERLAGGEDPVEDLEQPGWGDLGQGLASRHSDHVAVPDELAVGGVGQ HHHHHHHHCHHHHHHHCCCCCCCHHHHCCCCCCHHHHHHHHCCCCCCCCCHHHCCCCCCC AEDVVRPIQHGHEARRLLEQRKQPLALFAVALLARGERFHRLAQAVLGQHPAGGLDAGAE HHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCC HAPHRAGLVGQGTVGEGEEGRLGIAVALHQEGQVLLPDALAVERRADQGLQVGPDLGPDL CCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEECCHHHHHHHHHCCCCCCCCCCCHHH LEPQAEGGGVPGAQDRRVGVVVDEGELGAPGDEHRLLGVQHHRRGGPQGLGPGGGVAERR CCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCEECHHHHCCCCCCCCCCCCCHHHHH ARPVVGAHERAHRPAALEEARNRHRTPRAIARAGAPSGALRHEPAGHLRVMLVPRTVGVR CCCCCCCHHHHCCCHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCHH RRTHNPAQWFSRGGVQHCRGVFRTLQPKAVHPFPASQCPA HCCCCHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA