| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197105053
Identifier: 197105053
GI number: 197105053
Start: 1791692
End: 1792438
Strand: Reverse
Name: 197105053
Synonym: PHZ_c1590
Alternate gene names: NA
Gene position: 1792438-1791692 (Counterclockwise)
Preceding gene: 197105058
Following gene: 197105052
Centisome position: 44.85
GC content: 76.97
Gene sequence:
>747_bases ATGCCCGTTCAACAGATCGCGACCTGGTCGCCCTACTGCGGCGTCGCGCCCGCGCCTGGAGAGCTCGTCCAGCGCTGGAA CCTGGATCCCTGGCTGCTCGCCGCCCTCGCCCTCCTCGCGGCCGGCTACGTCCTCCACCGCCGCCGGGGCGGGGCCGGCC GAGACGGCCTCGTGGCGCTCGCCGGGCTGCTGCTGGTCGTCAGCTTCGTCTCGCCGCTGTGCGCCGCGAGCTCGGCCCTG TTCTCGGCCCGGGCGACGCACCACGCCCTGCTGGTCGCCGCCGCCGCGCCCCTGCTGGCGTTCGGCCTGCCCCGCCGCGC GATCCCCGCCCTGCCCCTCGCGCCGGCCGTCGCCCTGCACGCCGCCGCCCTGTGGCTGTGGCACGCCCCGGGCCTCTACG CCTGGGCGCTGTCCAGCGATCTCGCCTACTGGCTGATGCAGGCCGGCCTGCTGGGCACGGCCCTCGCCTTCTGGAGCGCG GTGCGCCGGGCCGGCGTGCTGGCCGGCGCGGCGGGCCTCTTCGTCACCATGATGCAGACCGGCCTGCTGGGCGCGCTCCT CACCTTCGCCGCCGAGCCGCTCTACGCGCCGCACCTGGCGAGCACCTGGGCCTTCGGCCTCTCGCCCCTCGCCGACCAGC AGCTGGCGGGCCTGATCATGTGGGCCCCCATGGCCGGCGCGTACCTGCTCGCCGCCCTCGCGCTCGTGGGGCGCAGCCTC TCCCCGGTCCGGGTCGCGCCCGCATGA
Upstream 100 bases:
>100_bases GCCTCACCGGCTAAGGTTCCGGGAACCTCCACCGCGGCGGGCGGTTCCCCCGGCGCGCCCTTCAGCGTCCGGGGGGCGCG CCGGGGAGGATCGCGCGCTC
Downstream 100 bases:
>100_bases TCGTCGCCCGCCTGCGCCGCTGGGCCCGCGGCCACACGCGCCGGCGGCGCTACTCGCCCGTCGGCATGGCCTTCCACTGG ACGGTGGCGGCGCTGATCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 248; Mature: 247
Protein sequence:
>248_residues MPVQQIATWSPYCGVAPAPGELVQRWNLDPWLLAALALLAAGYVLHRRRGGAGRDGLVALAGLLLVVSFVSPLCAASSAL FSARATHHALLVAAAAPLLAFGLPRRAIPALPLAPAVALHAAALWLWHAPGLYAWALSSDLAYWLMQAGLLGTALAFWSA VRRAGVLAGAAGLFVTMMQTGLLGALLTFAAEPLYAPHLASTWAFGLSPLADQQLAGLIMWAPMAGAYLLAALALVGRSL SPVRVAPA
Sequences:
>Translated_248_residues MPVQQIATWSPYCGVAPAPGELVQRWNLDPWLLAALALLAAGYVLHRRRGGAGRDGLVALAGLLLVVSFVSPLCAASSAL FSARATHHALLVAAAAPLLAFGLPRRAIPALPLAPAVALHAAALWLWHAPGLYAWALSSDLAYWLMQAGLLGTALAFWSA VRRAGVLAGAAGLFVTMMQTGLLGALLTFAAEPLYAPHLASTWAFGLSPLADQQLAGLIMWAPMAGAYLLAALALVGRSL SPVRVAPA >Mature_247_residues PVQQIATWSPYCGVAPAPGELVQRWNLDPWLLAALALLAAGYVLHRRRGGAGRDGLVALAGLLLVVSFVSPLCAASSALF SARATHHALLVAAAAPLLAFGLPRRAIPALPLAPAVALHAAALWLWHAPGLYAWALSSDLAYWLMQAGLLGTALAFWSAV RRAGVLAGAAGLFVTMMQTGLLGALLTFAAEPLYAPHLASTWAFGLSPLADQQLAGLIMWAPMAGAYLLAALALVGRSLS PVRVAPA
Specific function: Unknown
COG id: COG3336
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25689; Mature: 25557
Theoretical pI: Translated: 10.11; Mature: 10.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVQQIATWSPYCGVAPAPGELVQRWNLDPWLLAALALLAAGYVLHRRRGGAGRDGLVAL CCCHHHCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH AGLLLVVSFVSPLCAASSALFSARATHHALLVAAAAPLLAFGLPRRAIPALPLAPAVALH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHH AAALWLWHAPGLYAWALSSDLAYWLMQAGLLGTALAFWSAVRRAGVLAGAAGLFVTMMQT HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLLGALLTFAAEPLYAPHLASTWAFGLSPLADQQLAGLIMWAPMAGAYLLAALALVGRSL HHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC SPVRVAPA CCEECCCC >Mature Secondary Structure PVQQIATWSPYCGVAPAPGELVQRWNLDPWLLAALALLAAGYVLHRRRGGAGRDGLVAL CCHHHCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH AGLLLVVSFVSPLCAASSALFSARATHHALLVAAAAPLLAFGLPRRAIPALPLAPAVALH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHH AAALWLWHAPGLYAWALSSDLAYWLMQAGLLGTALAFWSAVRRAGVLAGAAGLFVTMMQT HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLLGALLTFAAEPLYAPHLASTWAFGLSPLADQQLAGLIMWAPMAGAYLLAALALVGRSL HHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC SPVRVAPA CCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA