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The map label for this gene is 197105051

Identifier: 197105051

GI number: 197105051

Start: 1790339

End: 1791124

Strand: Direct

Name: 197105051

Synonym: PHZ_c1588

Alternate gene names: NA

Gene position: 1790339-1791124 (Clockwise)

Preceding gene: 197105043

Following gene: 197105054

Centisome position: 44.8

GC content: 74.05

Gene sequence:

>786_bases
GTGAAGCTTGAGGATGCAACCCTTCGCGACGGCCGCGGTTCCTTCGGATGCGTCGTTTCACAGGTGGTTTCAGAGGGAGC
GCCCGCCATCGCCAGCCTGTCCGGCCTCGTGTTCCGCGCCCTCGGCCTGCCGGTCATGCTCCTGGCCGCAGGCTGCGCCG
CCGAGCGGCCGACGGATCCGTTCACGGCGACGGGCGAGCTCGTCGCGTTGAGCGGCGGCGACGCCGGGCCGGGGCGGGCC
TGCATCGCCTGCCACGGCCTGCAGGGACAGGGCGACGGGGAGCTCGCGCCGCGCCTGGCGGGTCTGCCGTTCGGCTACCT
GCTGAAGCAGATGGAGGACTACGCCGACGGCCGGCGGGCGCACCCGCAGATGAGCGAGATCGCGAAGGCGCTAGACGCCA
GGTCCCGGCGCGAGGTGGCGGCCTACTACGCGTCGCTTCCGGTCCGCGCCGCGCCGGTCCCGCCCGCCGCCGCGGCGCCG
CGGATCGTGGCGCTGTACCACCGGGGCGATCCCGGACGGGGCCTGCAGGCCTGTGCGAGCTGCCATGGTCCGGCGGGCGA
GGGCGTGGGGCCGGCGAACCCGCCGCTCAGCGGACAGCCGCCGGGCTACCTGGCCGCCCAGTTCGACCGCTGGCGGTCCA
GCGAGCGGCGCAACGATCCGCAGAACCTCATGCTGGAGATCGCCCGTCGCCTGAGTCCGGAGGAGACCACCGCTCTTTCC
GCCTATGCCGCGGCTCTATCCCCAGCCAGCGGTGCAGCGTCGGCAGGCCCGGCAGCATCCCCGTGA

Upstream 100 bases:

>100_bases
TGGCCGTAGGCCCGCCGCCCGTCTTTCCGCATCCGCCCACCAGCAGCGCGGCGCAGGCGCCGACCGCGGCGGCGCCCCGC
ATTGGCATCCGACCGTCCCC

Downstream 100 bases:

>100_bases
GCACGTCGTCGGTGTTGACCAGCTCGTGCTTGAGCGTCGCGCCGACGTGGAGGGGAATGAGGACCAGGAGGCCCACGATC
GTCCAGCCGTGGACCCATTC

Product: cytochrome c

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MKLEDATLRDGRGSFGCVVSQVVSEGAPAIASLSGLVFRALGLPVMLLAAGCAAERPTDPFTATGELVALSGGDAGPGRA
CIACHGLQGQGDGELAPRLAGLPFGYLLKQMEDYADGRRAHPQMSEIAKALDARSRREVAAYYASLPVRAAPVPPAAAAP
RIVALYHRGDPGRGLQACASCHGPAGEGVGPANPPLSGQPPGYLAAQFDRWRSSERRNDPQNLMLEIARRLSPEETTALS
AYAAALSPASGAASAGPAASP

Sequences:

>Translated_261_residues
MKLEDATLRDGRGSFGCVVSQVVSEGAPAIASLSGLVFRALGLPVMLLAAGCAAERPTDPFTATGELVALSGGDAGPGRA
CIACHGLQGQGDGELAPRLAGLPFGYLLKQMEDYADGRRAHPQMSEIAKALDARSRREVAAYYASLPVRAAPVPPAAAAP
RIVALYHRGDPGRGLQACASCHGPAGEGVGPANPPLSGQPPGYLAAQFDRWRSSERRNDPQNLMLEIARRLSPEETTALS
AYAAALSPASGAASAGPAASP
>Mature_261_residues
MKLEDATLRDGRGSFGCVVSQVVSEGAPAIASLSGLVFRALGLPVMLLAAGCAAERPTDPFTATGELVALSGGDAGPGRA
CIACHGLQGQGDGELAPRLAGLPFGYLLKQMEDYADGRRAHPQMSEIAKALDARSRREVAAYYASLPVRAAPVPPAAAAP
RIVALYHRGDPGRGLQACASCHGPAGEGVGPANPPLSGQPPGYLAAQFDRWRSSERRNDPQNLMLEIARRLSPEETTALS
AYAAALSPASGAASAGPAASP

Specific function: Diheme, high potential cytochrome c believed to be an intermediate electron donor in an anaerobic electron transport chain [H]

COG id: COG2863

COG function: function code C; Cytochrome c553

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 cytochrome c domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR008168 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 26704; Mature: 26704

Theoretical pI: Translated: 7.37; Mature: 7.37

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLEDATLRDGRGSFGCVVSQVVSEGAPAIASLSGLVFRALGLPVMLLAAGCAAERPTDP
CCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
FTATGELVALSGGDAGPGRACIACHGLQGQGDGELAPRLAGLPFGYLLKQMEDYADGRRA
CCCCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCCHHHHCCCHHHHHHHHHHHHCCCCC
HPQMSEIAKALDARSRREVAAYYASLPVRAAPVPPAAAAPRIVALYHRGDPGRGLQACAS
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHH
CHGPAGEGVGPANPPLSGQPPGYLAAQFDRWRSSERRNDPQNLMLEIARRLSPEETTALS
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHH
AYAAALSPASGAASAGPAASP
HHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKLEDATLRDGRGSFGCVVSQVVSEGAPAIASLSGLVFRALGLPVMLLAAGCAAERPTDP
CCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
FTATGELVALSGGDAGPGRACIACHGLQGQGDGELAPRLAGLPFGYLLKQMEDYADGRRA
CCCCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCCHHHHCCCHHHHHHHHHHHHCCCCC
HPQMSEIAKALDARSRREVAAYYASLPVRAAPVPPAAAAPRIVALYHRGDPGRGLQACAS
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHH
CHGPAGEGVGPANPPLSGQPPGYLAAQFDRWRSSERRNDPQNLMLEIARRLSPEETTALS
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHH
AYAAALSPASGAASAGPAASP
HHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA