| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197105044
Identifier: 197105044
GI number: 197105044
Start: 1783295
End: 1784305
Strand: Reverse
Name: 197105044
Synonym: PHZ_c1581
Alternate gene names: NA
Gene position: 1784305-1783295 (Counterclockwise)
Preceding gene: 197105045
Following gene: 197105042
Centisome position: 44.65
GC content: 74.48
Gene sequence:
>1011_bases ATGTCTTCGCCTTCTGACCGGCTGACGCCGCAACTCGCCTCGGCCTTCGCCCGCATCGCCCTCGGCCACGTCGCCCGCGA GTACCCGAACAAGCTCGACCACGTGCTGGACGGGCCGCAGGACGCCCTCGGGCCCCGGGCCCTGCACCCGATCTACTACG GCAGCTTCGACTGGCACTCCTGCGTCCACGGCTACTGGACCCTGGCGACCGTGCTGCGCCTCCACCCGGACATCCCCGAG GCGCCGGCGATCCGCGCCCGCTTCGACGAGGCCTTCACGCCCGCCAACGTGGCGGCCGAGGTCGCCTACCTCGCCCGTCC CTCCGCCCGGGGCTTCGAGCGGCCCTACGGCTGGGGCTGGCTCCTGAAGCTGCAGGGCGAGCTCCTGGCCCACGACGCGC CCTGGGCCGCCGTCCACCAGCCGCTCGCCGACGCCTTCGCCCAGCGGTTCCGCGACTTCCTGCCGATCGCCGCCTATCCG ATCCGCACCGGGGTCCACTCCTCCACCAGCTTCGCCCTGGCGCTGGCCAGCGACTACGCCCGCGCCGCCGACCCCGGCCT CCTGGACCTCTTCCGCGACAAGGTCCTCGCCTGGCACGCGGGCGACCGCGACGCCCAGGCCTGGGAGCCGTCGCTGGACG AGTTCCTGTCGGCCACCCTGGTGACCGCCGAGTGCCTGCGCCGGCTGCTGCCGCCCGGCGATTTCCGCGCCTGGTTCGCC GCCTACCTGCCGCGCCTGGATCAGCGTCGCCCGGCCAGCCTCTTCACGCCCGCCGTCGTCACCGACCGCACCGACGGCAA GATCGTCCACCTCGACGGCCTGAACCTGTCCCGCGCCTGGTGCTGGCGCGAGCTGGCCCTCACGCTGGAGGGCGAGGCCC GGCGCGCCGCCGAGGACGCCGCCCGCGACCATCTGGCCGCCAGCCTGCCGCACGTCGCCGGCGACTACATGGGCGAGCAC TGGCTGGCCTCGTTCGCCCTCCTGGCCCTGACGGCGGGCGACGGGCCCTAG
Upstream 100 bases:
>100_bases GTGCCCCCGGCCCTGCTCGAGCTCCCCGACCGCTACTCGGTCATCAAGGCGCAGATCCCCACGGCCCTGCCGCTGCTCCT CGTCAACATCGGCCTCATGT
Downstream 100 bases:
>100_bases CCTCGCGGCTCCAGCAGCGCCTGGGCCTGTTCGGTCAGCGCCCACCGCGAGCGGCAGTGGGCCTCGCCCGCCAGCCGGCC GTCCCAGCCCACGAACGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 336; Mature: 335
Protein sequence:
>336_residues MSSPSDRLTPQLASAFARIALGHVAREYPNKLDHVLDGPQDALGPRALHPIYYGSFDWHSCVHGYWTLATVLRLHPDIPE APAIRARFDEAFTPANVAAEVAYLARPSARGFERPYGWGWLLKLQGELLAHDAPWAAVHQPLADAFAQRFRDFLPIAAYP IRTGVHSSTSFALALASDYARAADPGLLDLFRDKVLAWHAGDRDAQAWEPSLDEFLSATLVTAECLRRLLPPGDFRAWFA AYLPRLDQRRPASLFTPAVVTDRTDGKIVHLDGLNLSRAWCWRELALTLEGEARRAAEDAARDHLAASLPHVAGDYMGEH WLASFALLALTAGDGP
Sequences:
>Translated_336_residues MSSPSDRLTPQLASAFARIALGHVAREYPNKLDHVLDGPQDALGPRALHPIYYGSFDWHSCVHGYWTLATVLRLHPDIPE APAIRARFDEAFTPANVAAEVAYLARPSARGFERPYGWGWLLKLQGELLAHDAPWAAVHQPLADAFAQRFRDFLPIAAYP IRTGVHSSTSFALALASDYARAADPGLLDLFRDKVLAWHAGDRDAQAWEPSLDEFLSATLVTAECLRRLLPPGDFRAWFA AYLPRLDQRRPASLFTPAVVTDRTDGKIVHLDGLNLSRAWCWRELALTLEGEARRAAEDAARDHLAASLPHVAGDYMGEH WLASFALLALTAGDGP >Mature_335_residues SSPSDRLTPQLASAFARIALGHVAREYPNKLDHVLDGPQDALGPRALHPIYYGSFDWHSCVHGYWTLATVLRLHPDIPEA PAIRARFDEAFTPANVAAEVAYLARPSARGFERPYGWGWLLKLQGELLAHDAPWAAVHQPLADAFAQRFRDFLPIAAYPI RTGVHSSTSFALALASDYARAADPGLLDLFRDKVLAWHAGDRDAQAWEPSLDEFLSATLVTAECLRRLLPPGDFRAWFAA YLPRLDQRRPASLFTPAVVTDRTDGKIVHLDGLNLSRAWCWRELALTLEGEARRAAEDAARDHLAASLPHVAGDYMGEHW LASFALLALTAGDGP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37081; Mature: 36950
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSPSDRLTPQLASAFARIALGHVAREYPNKLDHVLDGPQDALGPRALHPIYYGSFDWHS CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCEECCCCHHH CVHGYWTLATVLRLHPDIPEAPAIRARFDEAFTPANVAAEVAYLARPSARGFERPYGWGW HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCEE LLKLQGELLAHDAPWAAVHQPLADAFAQRFRDFLPIAAYPIRTGVHSSTSFALALASDYA EEEECCHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHH RAADPGLLDLFRDKVLAWHAGDRDAQAWEPSLDEFLSATLVTAECLRRLLPPGDFRAWFA HHCCCCHHHHHHHHHEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHH AYLPRLDQRRPASLFTPAVVTDRTDGKIVHLDGLNLSRAWCWRELALTLEGEARRAAEDA HHHHHHCCCCCCHHCCCCCEECCCCCEEEEECCCCCHHHHHHHHHHHEECCHHHHHHHHH ARDHLAASLPHVAGDYMGEHWLASFALLALTAGDGP HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SSPSDRLTPQLASAFARIALGHVAREYPNKLDHVLDGPQDALGPRALHPIYYGSFDWHS CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCEECCCCHHH CVHGYWTLATVLRLHPDIPEAPAIRARFDEAFTPANVAAEVAYLARPSARGFERPYGWGW HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCEE LLKLQGELLAHDAPWAAVHQPLADAFAQRFRDFLPIAAYPIRTGVHSSTSFALALASDYA EEEECCHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHH RAADPGLLDLFRDKVLAWHAGDRDAQAWEPSLDEFLSATLVTAECLRRLLPPGDFRAWFA HHCCCCHHHHHHHHHEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHH AYLPRLDQRRPASLFTPAVVTDRTDGKIVHLDGLNLSRAWCWRELALTLEGEARRAAEDA HHHHHHCCCCCCHHCCCCCEECCCCCEEEEECCCCCHHHHHHHHHHHEECCHHHHHHHHH ARDHLAASLPHVAGDYMGEHWLASFALLALTAGDGP HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA