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The map label for this gene is trbC

Identifier: 197104976

GI number: 197104976

Start: 1717242

End: 1717562

Strand: Direct

Name: trbC

Synonym: PHZ_c1513

Alternate gene names: NA

Gene position: 1717242-1717562 (Clockwise)

Preceding gene: 197104975

Following gene: 197104977

Centisome position: 42.97

GC content: 66.67

Gene sequence:

>321_bases
ATGATCCGCCGCATTCGCGGGCGGCTCGCGAGCGCGAGCGCCGTCGCAACCGTCTGGCTGCTCGCCGGGCCGGCCTACGC
CGCCGGCTCATCCATGCCCTGGGAAGCCCCGCTGCAGAAAATCCTGCAGTCGATCGAGGGCCCCGTGGCCAAGATCATCG
CGGTGATCATCATCATCACCACAGGCCTGACCCTGGCCTTTGGCGACACCTCGGGTGGCTTTCGACGGCTGATCCAGATC
GTCTTCGGCCTCTCGATCGCCTTCGCCGCCTCCAGCTTCTTCCTGTCCTTCTTCTCGTTCGGCGGCGGGGCGCTGGTCTG
A

Upstream 100 bases:

>100_bases
CGGATCGCCGCCTCACCGAACTCTGCGCCGTGGCGGACCTCGCCGCCGACGGCGAGTACCGCATCGCCGACATGAGCGCG
GCTTCCCAAGGAGAGCTTCC

Downstream 100 bases:

>100_bases
TGCAGCAGACACCCACGCCTCCTGGCTTTGAAGCCCCGGTTCACCGCGCCCTCACCGAGCCGGTGTTGCTGGCCGGCGCG
CCGCGCGCCTTCGCCATCGT

Product: conjugal transfer protein

Products: NA

Alternate protein names: Conjugal Transfer Protein; Conjugal Transfer Protein Trbc; TrbC-Like Protein; Conjugative Transfer Protein TrbC; Conjugal Transfer Protein TRBC; Type IV Secretory Pathway VirB2 Component; Conjugal Transfer TrbC Transmembrane Protein

Number of amino acids: Translated: 106; Mature: 106

Protein sequence:

>106_residues
MIRRIRGRLASASAVATVWLLAGPAYAAGSSMPWEAPLQKILQSIEGPVAKIIAVIIIITTGLTLAFGDTSGGFRRLIQI
VFGLSIAFAASSFFLSFFSFGGGALV

Sequences:

>Translated_106_residues
MIRRIRGRLASASAVATVWLLAGPAYAAGSSMPWEAPLQKILQSIEGPVAKIIAVIIIITTGLTLAFGDTSGGFRRLIQI
VFGLSIAFAASSFFLSFFSFGGGALV
>Mature_106_residues
MIRRIRGRLASASAVATVWLLAGPAYAAGSSMPWEAPLQKILQSIEGPVAKIIAVIIIITTGLTLAFGDTSGGFRRLIQI
VFGLSIAFAASSFFLSFFSFGGGALV

Specific function: Unknown

COG id: COG3838

COG function: function code U; Type IV secretory pathway, VirB2 components (pilins)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11076; Mature: 11076

Theoretical pI: Translated: 11.88; Mature: 11.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRRIRGRLASASAVATVWLLAGPAYAAGSSMPWEAPLQKILQSIEGPVAKIIAVIIIIT
CCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHH
TGLTLAFGDTSGGFRRLIQIVFGLSIAFAASSFFLSFFSFGGGALV
CCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MIRRIRGRLASASAVATVWLLAGPAYAAGSSMPWEAPLQKILQSIEGPVAKIIAVIIIIT
CCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHH
TGLTLAFGDTSGGFRRLIQIVFGLSIAFAASSFFLSFFSFGGGALV
CCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA