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The map label for this gene is trbB [H]

Identifier: 197104975

GI number: 197104975

Start: 1716262

End: 1717245

Strand: Direct

Name: trbB [H]

Synonym: PHZ_c1512

Alternate gene names: 197104975

Gene position: 1716262-1717245 (Clockwise)

Preceding gene: 197104973

Following gene: 197104976

Centisome position: 42.95

GC content: 70.73

Gene sequence:

>984_bases
GTGTCGATCACCCCGATCCGCAACGAGGTCTTCGTGCGCAGCGCCAGGATGCTGCGCACAGCGCTCGGCCCGCGCATCGC
GGGCTGGCTCGATGACGCCGAAGTCGTCGAAGTCATGCTCAATCCGGACGGCCAGCTTTGGCTGGACCGGCTGGGCGCCG
GGCTCCAGCGCACCGGTTGCGAGCTGACCCCGGAAGACGGCGAGCGGATCGTGCGCCTAGTGGCCCATCACGTGGGCGCC
GAAGTTCATGCGGGCGCGCCGCGAATTTCCGCCGAGCTGCCGGAGAGTGGCGAGCGGTTCGAGGGACTGCTCCCGCCGGT
TGTGACTGCTCCCACGTTCGCGATCCGCAAGCCGGCCGTCGCGGTGTTCACGCTGCAGGACTACGTCGACGCCGGCGTCA
TGGGCGCGGCTGCGGCGGATGTCCTCCGCCGCGCCGTCGCCGAGCGGCAGAACATCCTGGTCGCCGGCGGGACCTCCACG
GGCAAGACCACGCTGGCCAACGCCCTGCTGGCCGAGGTCGCCAAGACCGGCGACCGCGTGGTGCTCATCGAAGACACCCG
CGAGCTTCAGTGCGCCGCGCCGAACCTGGTGGCGCTTCGGACCAAGGACGGCGTGGCCTCGCTGGCGGATCTGGTCCGGT
CGTCGCTGCGGCTGCGGCCCGACCGCATCCCAATCGGAGAGGTGCGTGGAGCGGAAGCGCTCGACCTGCTCAAGGCCTGG
GGGACTGGCCATCCGGGCGGCATCGGCACCATCCACGCCGGCACGGCGCAGGGCGCGCTGCGTCGGCTCGAGCAGCTGAT
CCAGGAGGCAGTGCCGGTCGTGCCTCGCGCCCTGATCGCTGAAACCATCGACCTGATCGCCGTCCTGAACGGCCGAGGTG
CGGATCGCCGCCTCACCGAACTCTGCGCCGTGGCGGACCTCGCCGCCGACGGCGAGTACCGCATCGCCGACATGAGCGCG
GCTTCCCAAGGAGAGCTTCCATGA

Upstream 100 bases:

>100_bases
GAGCACTACTACGACCGAGGCGCTGTTGATCGGTCGTCGTTTGGGCGCTCATTAGTGACCCCGTTTTCTGCGGCCGACCG
GCCGAGAACGGGAGCGTCCG

Downstream 100 bases:

>100_bases
TCCGCCGCATTCGCGGGCGGCTCGCGAGCGCGAGCGCCGTCGCAACCGTCTGGCTGCTCGCCGGGCCGGCCTACGCCGCC
GGCTCATCCATGCCCTGGGA

Product: conjugal transfer protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 327; Mature: 326

Protein sequence:

>327_residues
MSITPIRNEVFVRSARMLRTALGPRIAGWLDDAEVVEVMLNPDGQLWLDRLGAGLQRTGCELTPEDGERIVRLVAHHVGA
EVHAGAPRISAELPESGERFEGLLPPVVTAPTFAIRKPAVAVFTLQDYVDAGVMGAAAADVLRRAVAERQNILVAGGTST
GKTTLANALLAEVAKTGDRVVLIEDTRELQCAAPNLVALRTKDGVASLADLVRSSLRLRPDRIPIGEVRGAEALDLLKAW
GTGHPGGIGTIHAGTAQGALRRLEQLIQEAVPVVPRALIAETIDLIAVLNGRGADRRLTELCAVADLAADGEYRIADMSA
ASQGELP

Sequences:

>Translated_327_residues
MSITPIRNEVFVRSARMLRTALGPRIAGWLDDAEVVEVMLNPDGQLWLDRLGAGLQRTGCELTPEDGERIVRLVAHHVGA
EVHAGAPRISAELPESGERFEGLLPPVVTAPTFAIRKPAVAVFTLQDYVDAGVMGAAAADVLRRAVAERQNILVAGGTST
GKTTLANALLAEVAKTGDRVVLIEDTRELQCAAPNLVALRTKDGVASLADLVRSSLRLRPDRIPIGEVRGAEALDLLKAW
GTGHPGGIGTIHAGTAQGALRRLEQLIQEAVPVVPRALIAETIDLIAVLNGRGADRRLTELCAVADLAADGEYRIADMSA
ASQGELP
>Mature_326_residues
SITPIRNEVFVRSARMLRTALGPRIAGWLDDAEVVEVMLNPDGQLWLDRLGAGLQRTGCELTPEDGERIVRLVAHHVGAE
VHAGAPRISAELPESGERFEGLLPPVVTAPTFAIRKPAVAVFTLQDYVDAGVMGAAAADVLRRAVAERQNILVAGGTSTG
KTTLANALLAEVAKTGDRVVLIEDTRELQCAAPNLVALRTKDGVASLADLVRSSLRLRPDRIPIGEVRGAEALDLLKAWG
TGHPGGIGTIHAGTAQGALRRLEQLIQEAVPVVPRALIAETIDLIAVLNGRGADRRLTELCAVADLAADGEYRIADMSAA
SQGELP

Specific function: Involved In A General Secretion Pathway (Gsp) For The Export Of Proteins (By Similarity). [C]

COG id: COG4962

COG function: function code U; Flp pilus assembly protein, ATPase CpaF

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP E family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014149
- InterPro:   IPR001482 [H]

Pfam domain/function: PF00437 GSPII_E [H]

EC number: NA

Molecular weight: Translated: 34582; Mature: 34451

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSITPIRNEVFVRSARMLRTALGPRIAGWLDDAEVVEVMLNPDGQLWLDRLGAGLQRTGC
CCCCCCHHHHHHHHHHHHHHHHCCHHHHCCCCHHHEEEEECCCCHHHHHHHCCCHHHCCC
ELTPEDGERIVRLVAHHVGAEVHAGAPRISAELPESGERFEGLLPPVVTAPTFAIRKPAV
CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCCHHCCCCHHHCCCCE
AVFTLQDYVDAGVMGAAAADVLRRAVAERQNILVAGGTSTGKTTLANALLAEVAKTGDRV
EEEEHHHHHCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHCCCEE
VLIEDTRELQCAAPNLVALRTKDGVASLADLVRSSLRLRPDRIPIGEVRGAEALDLLKAW
EEEECCCCCEECCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH
GTGHPGGIGTIHAGTAQGALRRLEQLIQEAVPVVPRALIAETIDLIAVLNGRGADRRLTE
CCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
LCAVADLAADGEYRIADMSAASQGELP
HHHHHHHCCCCCEEEEECCCCCCCCCC
>Mature Secondary Structure 
SITPIRNEVFVRSARMLRTALGPRIAGWLDDAEVVEVMLNPDGQLWLDRLGAGLQRTGC
CCCCCHHHHHHHHHHHHHHHHCCHHHHCCCCHHHEEEEECCCCHHHHHHHCCCHHHCCC
ELTPEDGERIVRLVAHHVGAEVHAGAPRISAELPESGERFEGLLPPVVTAPTFAIRKPAV
CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCCHHCCCCHHHCCCCE
AVFTLQDYVDAGVMGAAAADVLRRAVAERQNILVAGGTSTGKTTLANALLAEVAKTGDRV
EEEEHHHHHCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHCCCEE
VLIEDTRELQCAAPNLVALRTKDGVASLADLVRSSLRLRPDRIPIGEVRGAEALDLLKAW
EEEECCCCCEECCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH
GTGHPGGIGTIHAGTAQGALRRLEQLIQEAVPVVPRALIAETIDLIAVLNGRGADRRLTE
CCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
LCAVADLAADGEYRIADMSAASQGELP
HHHHHHHCCCCCEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]