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The map label for this gene is 197104971

Identifier: 197104971

GI number: 197104971

Start: 1711058

End: 1712776

Strand: Direct

Name: 197104971

Synonym: PHZ_c1508

Alternate gene names: NA

Gene position: 1711058-1712776 (Clockwise)

Preceding gene: 197104970

Following gene: 197104972

Centisome position: 42.82

GC content: 74.52

Gene sequence:

>1719_bases
ATGATCGAGGACGACTTTCATCTCCGCGTGGGGCGCATCCGCTCGCGGTTGTCCGGCGGGCCCCGGACCTTCGTCGGCCA
GGCGCTGGCGGCGGCCGAACGGGCTGGCGGTCTGGTGCGCCGCGCCACGGCGCGGAACGGCGCCTTCGGGCGCGGCCGGG
CGGCCAGCCTGGCCGCGCACCGACCGGGGGCGCGGAGCCGCGGCGCTGTCGTGAAGGCGCGGGTGGTGCGGCAGGGCGGC
GGTCGGGCGCCACTGGCCACCCACCTCAACTACCTGCAGCGGGAGGGGGTCACCCAGGACGGCGCCCGCGGGCGGCTGTT
CGACGCCGACACCGACGCGGCCGACGCGCGCGGCTTTGCCGAGCGCTGCGAGGGCGACCGCCACCACTTCCGCTTCATCG
TCTCGCCCGACGACGCCGAGCAGCTGTCGGACCTGAAGGCCTTCACCCGCGACCTGATGGAGCAGGCGCAGGCCGATCTC
GGAACCCGCCTCGACTGGGTGGCGGTGGACCACTGGAACACCGGGCACCCCCATCTGCACGTGATCGTCCGCGGCCGCAC
CGACCAGGGCGCGGACCTGGTGATCTCTCCCGACTACATCCGCGAGGGGCTGCGGGCCCGCGCCGGTCATCTGGTCAACT
TGGAGCTTGGGCCGCGCACCGACGCCGAGCTGCAACGGCGGATGAACCTTCAGATCGGCGCGGACCGCTGGACGAGCCTG
GACCGCGGCTTCGCCCGCCTGGCGGACGAGCAGGGCGTGGTGGACCTGCGCCGGGGCGGGGGCGCGGGTCCGGCCGACCT
GCACCAGGCGCGCGTCGCGCGGATGCGCAAGCTCAAGGGCCTCGGTCTCGCCGATGAACTTTCGCCGGGCCGCTGGCGCC
TGGGGCCGGACGCCGAAGCGGCCCTGCGCCAATTGGGGCAGCGGCAGGATGTGATCGCCCGCATGCACCGGGCGCTCGCC
GACCAGGGCGTGGAGCGGGATCCGGCGCGGTTCGAGGTGGACGGCGGACCCCCGGAGGGCTTGCTCGGGCGGCTTGCCGG
GCGCGGCTTGGACGATGAGCTGCGCGGCAGCGGCTACGCGATCCTGGATGGTCTCGACGGCCGCACCCACCACGTCCGGC
TGGCGGACCTGGACGACGCCAGCGACGCACCCCTGGGCAGCCTTGTCGAACTCCGCCGCCGCGAGTGGCAAGGCCGGCGC
AGCCGGCTGGTCCTGCAGGTCCGCTCCGACCTGGGCTTGGCCGACCAGATCCGCGCGGAGGGCGCCACCTGGCTCGACCG
CCAGCTGGTTGGGCGCAACCCCGCCGGGCTGGGGGAGGGTGGCTTCCCAGACGAGGTGCGGGCGGCTCTCGATGCCCGTA
CTGACCACCTGGCCCGGGAGGGGCTGGCCCAGCGGAGCGGGCGACGGGTGGTGTTCGCCCGCGATCTCATCGAGACGCTG
CGTCAGCGGGAGCTCGCGACCGCATCGCGCCGGCTCTCTGGCCAGACCGGCCTGGAAGCGCAGCCGATCGGCGCCGACGG
CGTGGTGGCCGGGACCTACCGGCAGCGGGTCACCCTGGCCTCCGGGCGCTTTGCGATGATCGACAATGGCCTGGGCTTCA
CCCTCGTGCCTTGGCGGCCCGATCTCGAACGGCATCTGGGCGGCCACGTGCAGGGCGTGCTCACCCCAGGCGCCGGCGTC
GCCTGGTCCTTCAGCCCCAAGCGCGGGCTCGGCCGATGA

Upstream 100 bases:

>100_bases
ATAGCCGCGCGCGAGGTGCGCATGTTGTCGCCAGCCTGCGATTTCTGCCAAGTGGCTGCTTGGGCTCAGGAAATCGCACC
TCGCGCGGCGGGGCGCGTCC

Downstream 100 bases:

>100_bases
GGAGGACACGGCCATGAACGGCACGAAGGTGATGTGGGGGCAGCTGGCGGCGGTGTTCGCCATCGCCTTGGCCGGCGTCT
GGGCGGCGACGCAATGGACG

Product: type IV secretory pathway, VirD2 component (relaxase)

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 572; Mature: 572

Protein sequence:

>572_residues
MIEDDFHLRVGRIRSRLSGGPRTFVGQALAAAERAGGLVRRATARNGAFGRGRAASLAAHRPGARSRGAVVKARVVRQGG
GRAPLATHLNYLQREGVTQDGARGRLFDADTDAADARGFAERCEGDRHHFRFIVSPDDAEQLSDLKAFTRDLMEQAQADL
GTRLDWVAVDHWNTGHPHLHVIVRGRTDQGADLVISPDYIREGLRARAGHLVNLELGPRTDAELQRRMNLQIGADRWTSL
DRGFARLADEQGVVDLRRGGGAGPADLHQARVARMRKLKGLGLADELSPGRWRLGPDAEAALRQLGQRQDVIARMHRALA
DQGVERDPARFEVDGGPPEGLLGRLAGRGLDDELRGSGYAILDGLDGRTHHVRLADLDDASDAPLGSLVELRRREWQGRR
SRLVLQVRSDLGLADQIRAEGATWLDRQLVGRNPAGLGEGGFPDEVRAALDARTDHLAREGLAQRSGRRVVFARDLIETL
RQRELATASRRLSGQTGLEAQPIGADGVVAGTYRQRVTLASGRFAMIDNGLGFTLVPWRPDLERHLGGHVQGVLTPGAGV
AWSFSPKRGLGR

Sequences:

>Translated_572_residues
MIEDDFHLRVGRIRSRLSGGPRTFVGQALAAAERAGGLVRRATARNGAFGRGRAASLAAHRPGARSRGAVVKARVVRQGG
GRAPLATHLNYLQREGVTQDGARGRLFDADTDAADARGFAERCEGDRHHFRFIVSPDDAEQLSDLKAFTRDLMEQAQADL
GTRLDWVAVDHWNTGHPHLHVIVRGRTDQGADLVISPDYIREGLRARAGHLVNLELGPRTDAELQRRMNLQIGADRWTSL
DRGFARLADEQGVVDLRRGGGAGPADLHQARVARMRKLKGLGLADELSPGRWRLGPDAEAALRQLGQRQDVIARMHRALA
DQGVERDPARFEVDGGPPEGLLGRLAGRGLDDELRGSGYAILDGLDGRTHHVRLADLDDASDAPLGSLVELRRREWQGRR
SRLVLQVRSDLGLADQIRAEGATWLDRQLVGRNPAGLGEGGFPDEVRAALDARTDHLAREGLAQRSGRRVVFARDLIETL
RQRELATASRRLSGQTGLEAQPIGADGVVAGTYRQRVTLASGRFAMIDNGLGFTLVPWRPDLERHLGGHVQGVLTPGAGV
AWSFSPKRGLGR
>Mature_572_residues
MIEDDFHLRVGRIRSRLSGGPRTFVGQALAAAERAGGLVRRATARNGAFGRGRAASLAAHRPGARSRGAVVKARVVRQGG
GRAPLATHLNYLQREGVTQDGARGRLFDADTDAADARGFAERCEGDRHHFRFIVSPDDAEQLSDLKAFTRDLMEQAQADL
GTRLDWVAVDHWNTGHPHLHVIVRGRTDQGADLVISPDYIREGLRARAGHLVNLELGPRTDAELQRRMNLQIGADRWTSL
DRGFARLADEQGVVDLRRGGGAGPADLHQARVARMRKLKGLGLADELSPGRWRLGPDAEAALRQLGQRQDVIARMHRALA
DQGVERDPARFEVDGGPPEGLLGRLAGRGLDDELRGSGYAILDGLDGRTHHVRLADLDDASDAPLGSLVELRRREWQGRR
SRLVLQVRSDLGLADQIRAEGATWLDRQLVGRNPAGLGEGGFPDEVRAALDARTDHLAREGLAQRSGRRVVFARDLIETL
RQRELATASRRLSGQTGLEAQPIGADGVVAGTYRQRVTLASGRFAMIDNGLGFTLVPWRPDLERHLGGHVQGVLTPGAGV
AWSFSPKRGLGR

Specific function: Unknown

COG id: COG3843

COG function: function code U; Type IV secretory pathway, VirD2 components (relaxase)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 62300; Mature: 62300

Theoretical pI: Translated: 11.18; Mature: 11.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEDDFHLRVGRIRSRLSGGPRTFVGQALAAAERAGGLVRRATARNGAFGRGRAASLAAH
CCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCHHHHHHC
RPGARSRGAVVKARVVRQGGGRAPLATHLNYLQREGVTQDGARGRLFDADTDAADARGFA
CCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCEECCCCCCHHHHHHH
ERCEGDRHHFRFIVSPDDAEQLSDLKAFTRDLMEQAQADLGTRLDWVAVDHWNTGHPHLH
HHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCEEE
VIVRGRTDQGADLVISPDYIREGLRARAGHLVNLELGPRTDAELQRRMNLQIGADRWTSL
EEEECCCCCCCEEEECHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCCEECCHHHHHH
DRGFARLADEQGVVDLRRGGGAGPADLHQARVARMRKLKGLGLADELSPGRWRLGPDAEA
HHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCHHH
ALRQLGQRQDVIARMHRALADQGVERDPARFEVDGGPPEGLLGRLAGRGLDDELRGSGYA
HHHHHCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHCCCCCHHHCCCCEE
ILDGLDGRTHHVRLADLDDASDAPLGSLVELRRREWQGRRSRLVLQVRSDLGLADQIRAE
EEECCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCHHEEEEEECCCCCCHHHHHHC
GATWLDRQLVGRNPAGLGEGGFPDEVRAALDARTDHLAREGLAQRSGRRVVFARDLIETL
CCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHH
RQRELATASRRLSGQTGLEAQPIGADGVVAGTYRQRVTLASGRFAMIDNGLGFTLVPWRP
HHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCHHHEEEECCCCEEEEECCCCEEEECCCC
DLERHLGGHVQGVLTPGAGVAWSFSPKRGLGR
CHHHHCCCCEEEEECCCCCEEEECCCCCCCCC
>Mature Secondary Structure
MIEDDFHLRVGRIRSRLSGGPRTFVGQALAAAERAGGLVRRATARNGAFGRGRAASLAAH
CCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCHHHHHHC
RPGARSRGAVVKARVVRQGGGRAPLATHLNYLQREGVTQDGARGRLFDADTDAADARGFA
CCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCEECCCCCCHHHHHHH
ERCEGDRHHFRFIVSPDDAEQLSDLKAFTRDLMEQAQADLGTRLDWVAVDHWNTGHPHLH
HHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCEEE
VIVRGRTDQGADLVISPDYIREGLRARAGHLVNLELGPRTDAELQRRMNLQIGADRWTSL
EEEECCCCCCCEEEECHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCCEECCHHHHHH
DRGFARLADEQGVVDLRRGGGAGPADLHQARVARMRKLKGLGLADELSPGRWRLGPDAEA
HHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCHHH
ALRQLGQRQDVIARMHRALADQGVERDPARFEVDGGPPEGLLGRLAGRGLDDELRGSGYA
HHHHHCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHCCCCCHHHCCCCEE
ILDGLDGRTHHVRLADLDDASDAPLGSLVELRRREWQGRRSRLVLQVRSDLGLADQIRAE
EEECCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCHHEEEEEECCCCCCHHHHHHC
GATWLDRQLVGRNPAGLGEGGFPDEVRAALDARTDHLAREGLAQRSGRRVVFARDLIETL
CCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHH
RQRELATASRRLSGQTGLEAQPIGADGVVAGTYRQRVTLASGRFAMIDNGLGFTLVPWRP
HHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCHHHEEEECCCCEEEEECCCCEEEECCCC
DLERHLGGHVQGVLTPGAGVAWSFSPKRGLGR
CHHHHCCCCEEEEECCCCCEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA