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The map label for this gene is yjbJ [H]

Identifier: 197104970

GI number: 197104970

Start: 1709983

End: 1710822

Strand: Direct

Name: yjbJ [H]

Synonym: PHZ_c1507

Alternate gene names: 197104970

Gene position: 1709983-1710822 (Clockwise)

Preceding gene: 197104969

Following gene: 197104971

Centisome position: 42.79

GC content: 72.62

Gene sequence:

>840_bases
ATCCCCGACATGGGCGATGAACGCCAAGAAAGCCCTGCTCCTTTGTTCGATCGAACAAACGACGGCCGCTCCTTCGTCCC
GACCAGGTTCCGCAGAGCCGCCGCGCGGAGCGGCGGTCCAGGGCGGCCGTCAGGCCGGCGCGCGAGCGCCTTGCCCTGGA
CGGCCGGGAGCACGGTGGCACGCTGGCGGCTGATAGGGACGAGCGTGCTTTGGCTCGCGGTGCTGCCGTCGGCGGAGGCC
GCCGCCCAGGCGGCCCCGCCCCACAACGAGGTTGGCGGCGCGATCGCGGAGGCGGCGCGGCGCTTTGGCCTCCCGGAAGC
ATGGATCCGGGCGGTGATGCGCGTGGAGAGCGCCTTCCAGCCGCGCGCCGTGAGCCATGCCGGCGCCATGGGGCTGATGC
AGGTGATGCCGCAAACCTATGCGGAATTGCGCGGCCGCTACGGCCTGGGCGCCGATCCCTTCCACCCCCGCGACAACATC
CTGGCCGGGGCGGCCTACCTGCGGGAGATGTACGACCGCTTCGGCGCCCGCGGCTTCCTGGCCGCCTACAATGCGGGCCC
AGCGCGCTACCAGCAGCACCTGATCGAGGGGCGGCCGCTCCCGTTGGAGACGCGGGCCTACGTCGCCAAGCTCACGCCGG
CCGTCGGGGCGGCAGGCGTTTCGCCTGCGCCAGCCGCGGTCGTCGCGCCCCCTGCTGAGGCGCGTTCCACGCTCTTTGTT
GTCCTCGGTGGAGGCCAGGGAAAAGAGGCCGGGGCGTCTCCAGATGAGGCGCGCGCGGTTCTTGTGCCGGCGCGATCCCC
GCTCTTCGCCGCGCTGACGCCGCGGGTCGAGGCACGCTGA

Upstream 100 bases:

>100_bases
GTCCTCAACCCCGCCGCCGGTTCGCTTGACAGCCGCTACTTCGGCGCCCTGTCGGACGCCGCCGTGGTCGGTCGGGCCGA
GCCTCTTTGGCTGATCCAGG

Downstream 100 bases:

>100_bases
TGGTGGCCCACCTGCGTCGTACGGTCTCGCAGGTTGTCGCAGGTTCGGCGGCGGGCCACCGATTGATGGATCGATGGCAG
GATAAAAGCCGCGAGGTGCG

Product: hypothetical protein

Products: N-Acetylmuramic Acid Residues; N-Acetylglucosamine Residues [C]

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 278

Protein sequence:

>279_residues
MPDMGDERQESPAPLFDRTNDGRSFVPTRFRRAAARSGGPGRPSGRRASALPWTAGSTVARWRLIGTSVLWLAVLPSAEA
AAQAAPPHNEVGGAIAEAARRFGLPEAWIRAVMRVESAFQPRAVSHAGAMGLMQVMPQTYAELRGRYGLGADPFHPRDNI
LAGAAYLREMYDRFGARGFLAAYNAGPARYQQHLIEGRPLPLETRAYVAKLTPAVGAAGVSPAPAAVVAPPAEARSTLFV
VLGGGQGKEAGASPDEARAVLVPARSPLFAALTPRVEAR

Sequences:

>Translated_279_residues
MPDMGDERQESPAPLFDRTNDGRSFVPTRFRRAAARSGGPGRPSGRRASALPWTAGSTVARWRLIGTSVLWLAVLPSAEA
AAQAAPPHNEVGGAIAEAARRFGLPEAWIRAVMRVESAFQPRAVSHAGAMGLMQVMPQTYAELRGRYGLGADPFHPRDNI
LAGAAYLREMYDRFGARGFLAAYNAGPARYQQHLIEGRPLPLETRAYVAKLTPAVGAAGVSPAPAAVVAPPAEARSTLFV
VLGGGQGKEAGASPDEARAVLVPARSPLFAALTPRVEAR
>Mature_278_residues
PDMGDERQESPAPLFDRTNDGRSFVPTRFRRAAARSGGPGRPSGRRASALPWTAGSTVARWRLIGTSVLWLAVLPSAEAA
AQAAPPHNEVGGAIAEAARRFGLPEAWIRAVMRVESAFQPRAVSHAGAMGLMQVMPQTYAELRGRYGLGADPFHPRDNIL
AGAAYLREMYDRFGARGFLAAYNAGPARYQQHLIEGRPLPLETRAYVAKLTPAVGAAGVSPAPAAVVAPPAEARSTLFVV
LGGGQGKEAGASPDEARAVLVPARSPLFAALTPRVEAR

Specific function: Murein-Degrading Enzyme. May Play A Role In Recycling Of Muropeptides During Cell Elongation And/Or Cell Division (By Similarity). [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Attached To The Membrane By A Lipid Anchor [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transglycosylase slt family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008258
- InterPro:   IPR000189 [H]

Pfam domain/function: PF01464 SLT [H]

EC number: 3.2.1.- [C]

Molecular weight: Translated: 29508; Mature: 29377

Theoretical pI: Translated: 11.12; Mature: 11.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDMGDERQESPAPLFDRTNDGRSFVPTRFRRAAARSGGPGRPSGRRASALPWTAGSTVA
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHH
RWRLIGTSVLWLAVLPSAEAAAQAAPPHNEVGGAIAEAARRFGLPEAWIRAVMRVESAFQ
HHHHHHHHHEEHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC
PRAVSHAGAMGLMQVMPQTYAELRGRYGLGADPFHPRDNILAGAAYLREMYDRFGARGFL
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEE
AAYNAGPARYQQHLIEGRPLPLETRAYVAKLTPAVGAAGVSPAPAAVVAPPAEARSTLFV
EECCCCHHHHHHHHHCCCCCCCHHHHHHHHHCHHHCCCCCCCCCCEEECCCCCCCCEEEE
VLGGGQGKEAGASPDEARAVLVPARSPLFAALTPRVEAR
EEECCCCCCCCCCCCCCCEEEEECCCCEEEECCCCCCCC
>Mature Secondary Structure 
PDMGDERQESPAPLFDRTNDGRSFVPTRFRRAAARSGGPGRPSGRRASALPWTAGSTVA
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHH
RWRLIGTSVLWLAVLPSAEAAAQAAPPHNEVGGAIAEAARRFGLPEAWIRAVMRVESAFQ
HHHHHHHHHEEHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC
PRAVSHAGAMGLMQVMPQTYAELRGRYGLGADPFHPRDNILAGAAYLREMYDRFGARGFL
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEE
AAYNAGPARYQQHLIEGRPLPLETRAYVAKLTPAVGAAGVSPAPAAVVAPPAEARSTLFV
EECCCCHHHHHHHHHCCCCCCCHHHHHHHHHCHHHCCCCCCCCCCEEECCCCCCCCEEEE
VLGGGQGKEAGASPDEARAVLVPARSPLFAALTPRVEAR
EEECCCCCCCCCCCCCCCEEEEECCCCEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Muramic Acid [C]

Specific reaction: Cleavage Of The Beta-1,4-Glycosidic Bond Between N-Acetylmuramic Acid And N-Acetylglucosamine Residues, Thereby Conserving The Energy In A Newly Synthesized 1,6-Anhydrobond In The Muramic Acid Residue. [C]

General reaction: Cleavage Of The Beta-1,4-Glycosidic Bond [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]