| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197104957
Identifier: 197104957
GI number: 197104957
Start: 1700496
End: 1702700
Strand: Direct
Name: 197104957
Synonym: PHZ_c1494
Alternate gene names: NA
Gene position: 1700496-1702700 (Clockwise)
Preceding gene: 197104956
Following gene: 197104959
Centisome position: 42.55
GC content: 74.38
Gene sequence:
>2205_bases GTGACCGCGCGCCCATCCCTCCAGCCGGCCGAGGAGTTCGACACCCGGCCGGTCCTGATGACGGCGCCGCTCCGGGCGGG TTTCCAGCGCGCCGATCTCTCCCGTTACGGCGACTCCGTCTGGGACCTCTCGCCCGCGGTGTTCCGCGAGAACGCCCGGC GCTGCCACGTGACGGTCCGCTTCGATGGCGTCGGCGATCCGGCTACGGCCGCCGCGCTTCGCGAGTACCTCCACACCCGG CTCAACGTCGCGCGGCCTGGCGGCCGCCCGGTGCTGCCGCCGGCCAGCGCGCGCGGCGCCTTCAACCGCTGCCGCCGGTT CTTGGCGTTCGTCACCGCCGAGCTCGGGTGTTGCGATCCCGGCCGGGCCGACCAGGCGCTGGCGGACCGCTACGCCAAGG TTCTCCGGGACGCAGGGCTCAGGCCTACCGCCATCTCGCACCTGCTGGAGGTCGTGTTCGATCTCTTCGCCCTGCGCGAT CGGCTGCCGACCGCGCGGCTCGCCTTCGAGCCCTGGCCCGGCCGCTCCCCTGCGCTGGTCGCCGGCGTCAGGGGCGGCCC CGCCGAGAACCGCACGCCGCGCATTCCCGAGCCGGTCATGGCGCCGCTGCTCGCCTGGTCGCTGCGCTACATCGACCTGT TCGCCGCCGACATCTTCGCCGCCCGGGCCGAGCTGACCGGGCTCGAGCGTCGGCGCGACGCGCTCCTGCGCCAGGATGCG CCCCTGGCCGGGCTGGAGCGACGCCGGCGCCGGCGCGAGCGCCTGGCGGCCTTTTTCGACCAGCGGCGCGCGGAGGGCCG CGGCGTGCCGATCTGGACGAGCGCCCACAACGGCATCTGGCGGCGCGATCCTGCGACGGGAGAGGTCACCCCGCCCATCA ACGCCCACCTCCTGCACCTCCACGTCGGGATCGACGCGCAGGACCAGCCCGGCGACCACCTGCAGCTCGACGGCGGCGCG CCCGACCTGATCGCCGCCGCCGTCGCCGAGCTCGGGGTGGAGGTAGGCGGCCTGGATGCCGCCATCGCCGAGCTTCCCGG CGCGGGTCATCCATGGCGACCGCGCTTCGACGCCAAGACGCTGGCGCGGGAGGAGCGGATGCTGCAGGCCGCCTGCTACG TCGTCTGCGCCTATCTCACCGGCATGCGCGATTGCGAGGTCCAGGCCATGCGCTCGGGTTGCCTCTCGCTCACGCGCAGC GAGGACGGCGTGATCCTTCGCCATCGCCTGCGCTCCACCGCTTACAAGGGCAAGCGGGCGATCGGCGAGCCCGCCGAGTG GGTCACCATCGCCCCGGTGGCCCGCGCCGTGGAGGTGCTGGCCCAGCTTTCCGCCGCCCCGGCGGCCGCCCGCGGCGTCG ATACTCTGTGGCCGGTGCTGTCGCTGAAGACCGGGACCAAGGCCCACGTCTCGGCCGAGATCGTGCGCCAGCTCAACGCC TTCCGCGATCACCTCGACGGCCTGTTCGGCAGCCCCGGTGAGCCGGTCATCCCGCGCGATCCGGACGGCGCGCCCTGGCG CTTCACCACGCGGCAGTTCCGCCGCACCATCGCCTGGCACATCGCCAACCGCCCGTTCGGGACCGTGGCCGGCATGATCC AGTACAAGCACGCCTCGGTCGCCGCCTTCGAGGGCTACGCCGGGTCCAGCCGCTCGGGGTTCCGCGCCGAGGTCGAGGCC CAGCGCCGCCTTGGCCAGCTCGACGACATCCTGGATTATTTCGATCGGCGCCAGGGCGGCGCAACGCTTTCCGGCCCCGC CGCCGGCAAGGTCGCCCGCACGCTCGACGCCGCGGCCGAGGCGCTGGGGCCGTCGCCGGTGATACTCGCCGACCGCGGAC GGCTCCGGGCCCTGCTGGCGAGCCCGGCGCGCAGCCTGCATCCCGGCGTCCTCGCCGACTGCTTCTTCGACCCGGCGACG GCGCTCTGCCTCATCGGCCGCTCCGGCGAGGCCTCCGGGCCGGCCATTCCGCTCTGCCAGCCGACCCGCTGTCCTAACGC CTGCATCACGGCGCGCCACCGGCCGGCATGGTCGCGGGCCGCCGACGACGCGCGCGGTCTCCTGCGCGAGAAGCGCCTGT CGCCGGCGCAGCGCACCGTCCTGGCCGGCGAGCTGGCGCGGTTCACGGCCGTTCTGGACGGCATCGACGGCGCGCCTGGA CCTAACCAGGCTTCGCCGGGGCCTCCGCGTAGAGCGCCAGGATGA
Upstream 100 bases:
>100_bases GCCACATCCTGCCGGCGTTCTCCGACGCCGTCGTGGAGCAGGCCCGCGCGGCGCTCACCGACCGACCACCTGTGGCCTAC CTGCCGCCGGAAGCCCGCGG
Downstream 100 bases:
>100_bases GCGGACAGCCGGGGTCCAGCCCCGCGTCGCAGGCTCGGACGGAGTCGGCGAGCACCCGTTCCATCCGCCTGAGGTCGGCG ATCCGCGCCCGCACGTCCTT
Product: hypothetical protein
Products: NA
Alternate protein names: Phage Integrase; Integrase Family Protein; Phage Integrase Family Domain-Containing Protein; Orf_Bo
Number of amino acids: Translated: 734; Mature: 733
Protein sequence:
>734_residues MTARPSLQPAEEFDTRPVLMTAPLRAGFQRADLSRYGDSVWDLSPAVFRENARRCHVTVRFDGVGDPATAAALREYLHTR LNVARPGGRPVLPPASARGAFNRCRRFLAFVTAELGCCDPGRADQALADRYAKVLRDAGLRPTAISHLLEVVFDLFALRD RLPTARLAFEPWPGRSPALVAGVRGGPAENRTPRIPEPVMAPLLAWSLRYIDLFAADIFAARAELTGLERRRDALLRQDA PLAGLERRRRRRERLAAFFDQRRAEGRGVPIWTSAHNGIWRRDPATGEVTPPINAHLLHLHVGIDAQDQPGDHLQLDGGA PDLIAAAVAELGVEVGGLDAAIAELPGAGHPWRPRFDAKTLAREERMLQAACYVVCAYLTGMRDCEVQAMRSGCLSLTRS EDGVILRHRLRSTAYKGKRAIGEPAEWVTIAPVARAVEVLAQLSAAPAAARGVDTLWPVLSLKTGTKAHVSAEIVRQLNA FRDHLDGLFGSPGEPVIPRDPDGAPWRFTTRQFRRTIAWHIANRPFGTVAGMIQYKHASVAAFEGYAGSSRSGFRAEVEA QRRLGQLDDILDYFDRRQGGATLSGPAAGKVARTLDAAAEALGPSPVILADRGRLRALLASPARSLHPGVLADCFFDPAT ALCLIGRSGEASGPAIPLCQPTRCPNACITARHRPAWSRAADDARGLLREKRLSPAQRTVLAGELARFTAVLDGIDGAPG PNQASPGPPRRAPG
Sequences:
>Translated_734_residues MTARPSLQPAEEFDTRPVLMTAPLRAGFQRADLSRYGDSVWDLSPAVFRENARRCHVTVRFDGVGDPATAAALREYLHTR LNVARPGGRPVLPPASARGAFNRCRRFLAFVTAELGCCDPGRADQALADRYAKVLRDAGLRPTAISHLLEVVFDLFALRD RLPTARLAFEPWPGRSPALVAGVRGGPAENRTPRIPEPVMAPLLAWSLRYIDLFAADIFAARAELTGLERRRDALLRQDA PLAGLERRRRRRERLAAFFDQRRAEGRGVPIWTSAHNGIWRRDPATGEVTPPINAHLLHLHVGIDAQDQPGDHLQLDGGA PDLIAAAVAELGVEVGGLDAAIAELPGAGHPWRPRFDAKTLAREERMLQAACYVVCAYLTGMRDCEVQAMRSGCLSLTRS EDGVILRHRLRSTAYKGKRAIGEPAEWVTIAPVARAVEVLAQLSAAPAAARGVDTLWPVLSLKTGTKAHVSAEIVRQLNA FRDHLDGLFGSPGEPVIPRDPDGAPWRFTTRQFRRTIAWHIANRPFGTVAGMIQYKHASVAAFEGYAGSSRSGFRAEVEA QRRLGQLDDILDYFDRRQGGATLSGPAAGKVARTLDAAAEALGPSPVILADRGRLRALLASPARSLHPGVLADCFFDPAT ALCLIGRSGEASGPAIPLCQPTRCPNACITARHRPAWSRAADDARGLLREKRLSPAQRTVLAGELARFTAVLDGIDGAPG PNQASPGPPRRAPG >Mature_733_residues TARPSLQPAEEFDTRPVLMTAPLRAGFQRADLSRYGDSVWDLSPAVFRENARRCHVTVRFDGVGDPATAAALREYLHTRL NVARPGGRPVLPPASARGAFNRCRRFLAFVTAELGCCDPGRADQALADRYAKVLRDAGLRPTAISHLLEVVFDLFALRDR LPTARLAFEPWPGRSPALVAGVRGGPAENRTPRIPEPVMAPLLAWSLRYIDLFAADIFAARAELTGLERRRDALLRQDAP LAGLERRRRRRERLAAFFDQRRAEGRGVPIWTSAHNGIWRRDPATGEVTPPINAHLLHLHVGIDAQDQPGDHLQLDGGAP DLIAAAVAELGVEVGGLDAAIAELPGAGHPWRPRFDAKTLAREERMLQAACYVVCAYLTGMRDCEVQAMRSGCLSLTRSE DGVILRHRLRSTAYKGKRAIGEPAEWVTIAPVARAVEVLAQLSAAPAAARGVDTLWPVLSLKTGTKAHVSAEIVRQLNAF RDHLDGLFGSPGEPVIPRDPDGAPWRFTTRQFRRTIAWHIANRPFGTVAGMIQYKHASVAAFEGYAGSSRSGFRAEVEAQ RRLGQLDDILDYFDRRQGGATLSGPAAGKVARTLDAAAEALGPSPVILADRGRLRALLASPARSLHPGVLADCFFDPATA LCLIGRSGEASGPAIPLCQPTRCPNACITARHRPAWSRAADDARGLLREKRLSPAQRTVLAGELARFTAVLDGIDGAPGP NQASPGPPRRAPG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 79458; Mature: 79326
Theoretical pI: Translated: 10.15; Mature: 10.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTARPSLQPAEEFDTRPVLMTAPLRAGFQRADLSRYGDSVWDLSPAVFRENARRCHVTVR CCCCCCCCCHHHCCCCCEEEECCHHHCHHHHHHHHHCCHHHCCCHHHHHCCCCEEEEEEE FDGVGDPATAAALREYLHTRLNVARPGGRPVLPPASARGAFNRCRRFLAFVTAELGCCDP ECCCCCHHHHHHHHHHHHHHHCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC GRADQALADRYAKVLRDAGLRPTAISHLLEVVFDLFALRDRLPTARLAFEPWPGRSPALV CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCEE AGVRGGPAENRTPRIPEPVMAPLLAWSLRYIDLFAADIFAARAELTGLERRRDALLRQDA EECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PLAGLERRRRRRERLAAFFDQRRAEGRGVPIWTSAHNGIWRRDPATGEVTPPINAHLLHL CHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEE HVGIDAQDQPGDHLQLDGGAPDLIAAAVAELGVEVGGLDAAIAELPGAGHPWRPRFDAKT EECCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCHHH LAREERMLQAACYVVCAYLTGMRDCEVQAMRSGCLSLTRSEDGVILRHRLRSTAYKGKRA HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHC IGEPAEWVTIAPVARAVEVLAQLSAAPAAARGVDTLWPVLSLKTGTKAHVSAEIVRQLNA CCCCCCEEEHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHH FRDHLDGLFGSPGEPVIPRDPDGAPWRFTTRQFRRTIAWHIANRPFGTVAGMIQYKHASV HHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCE AAFEGYAGSSRSGFRAEVEAQRRLGQLDDILDYFDRRQGGATLSGPAAGKVARTLDAAAE EEECCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH ALGPSPVILADRGRLRALLASPARSLHPGVLADCFFDPATALCLIGRSGEASGPAIPLCQ HCCCCCEEEECCCHHHHHHHCCHHHCCCCHHHHHHHCHHHHHEEECCCCCCCCCCCCCCC PTRCPNACITARHRPAWSRAADDARGLLREKRLSPAQRTVLAGELARFTAVLDGIDGAPG CCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCC PNQASPGPPRRAPG CCCCCCCCCCCCCC >Mature Secondary Structure TARPSLQPAEEFDTRPVLMTAPLRAGFQRADLSRYGDSVWDLSPAVFRENARRCHVTVR CCCCCCCCHHHCCCCCEEEECCHHHCHHHHHHHHHCCHHHCCCHHHHHCCCCEEEEEEE FDGVGDPATAAALREYLHTRLNVARPGGRPVLPPASARGAFNRCRRFLAFVTAELGCCDP ECCCCCHHHHHHHHHHHHHHHCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC GRADQALADRYAKVLRDAGLRPTAISHLLEVVFDLFALRDRLPTARLAFEPWPGRSPALV CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCEE AGVRGGPAENRTPRIPEPVMAPLLAWSLRYIDLFAADIFAARAELTGLERRRDALLRQDA EECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PLAGLERRRRRRERLAAFFDQRRAEGRGVPIWTSAHNGIWRRDPATGEVTPPINAHLLHL CHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEE HVGIDAQDQPGDHLQLDGGAPDLIAAAVAELGVEVGGLDAAIAELPGAGHPWRPRFDAKT EECCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCHHH LAREERMLQAACYVVCAYLTGMRDCEVQAMRSGCLSLTRSEDGVILRHRLRSTAYKGKRA HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHC IGEPAEWVTIAPVARAVEVLAQLSAAPAAARGVDTLWPVLSLKTGTKAHVSAEIVRQLNA CCCCCCEEEHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHH FRDHLDGLFGSPGEPVIPRDPDGAPWRFTTRQFRRTIAWHIANRPFGTVAGMIQYKHASV HHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCE AAFEGYAGSSRSGFRAEVEAQRRLGQLDDILDYFDRRQGGATLSGPAAGKVARTLDAAAE EEECCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH ALGPSPVILADRGRLRALLASPARSLHPGVLADCFFDPATALCLIGRSGEASGPAIPLCQ HCCCCCEEEECCCHHHHHHHCCHHHCCCCHHHHHHHCHHHHHEEECCCCCCCCCCCCCCC PTRCPNACITARHRPAWSRAADDARGLLREKRLSPAQRTVLAGELARFTAVLDGIDGAPG CCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCC PNQASPGPPRRAPG CCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA