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The map label for this gene is hlyD [H]

Identifier: 197104920

GI number: 197104920

Start: 1652949

End: 1654415

Strand: Reverse

Name: hlyD [H]

Synonym: PHZ_c1455

Alternate gene names: 197104920

Gene position: 1654415-1652949 (Counterclockwise)

Preceding gene: 197104921

Following gene: 197104919

Centisome position: 41.4

GC content: 75.66

Gene sequence:

>1467_bases
ATGACCCCGACCCGCGTTTCCCGCACGACCCTCGCCCTCGCCGCCGCCGGCCTCCTGGCCGTTGGGGCCGGAGCCGGCTT
CGGCCTCTCACGCCTCGTCCAGCACAGCCCCGGCGCCTCGGCCGAACCCGGCCGCGAAGTGCTCTACTGGTACGACCCGA
TGGTCCCCGGCCAGCGGTTCGACCGGCCGGGAAAGTCTCCGTTCATGGACATGCAGCTGGTCCCGAAATACGCCGACGAG
GCGGGCGCAGAGACCGTCGCGGTCGATCCCGCCCGCATCCAGAGCCTGGGCGTGCGGCTCGCCCGCGTGGAACGGGGCCC
GTTGCCGAGCGAGGTCACGGCGCCCGGCGTGGTCGACTTCAACGGCCGCGACCTCGTGGTGGTCCAGGCCCGCGCCGGCG
GCTTCGTGCAGCGGACCTACCGCCGCGCGCCCGGCGACGTCGTCGGCGCCGGCGCGCCGCTGGCCGACGTCCTGGTTCCC
GAGTGGGGCGGCGCCCAGGCCGAGTTCCTGGCCGTCCGGCGCACGAAAGACGCGGCCCTGACCGCCGCGGCCCGCCAGCG
GCTGGCGCTGCTCGGCATGCCGCCAGGGCTGATCGCCGCGGTCGAGCGCAGCGGGCGGCCGCAGACGACGTTCCGCGTCA
CCGCCCCGGCCGGCGGCGTCATCCGGACGCTCGGCGTGCGGAGCGGCATGACCCTGAGCGCCGGCCAGACCCTGGCGGAG
ATCAGCGGCCTTTCCACGGTCTGGTTCAATGTCGCCGTGCCCGAGGCCGTGGCCGGGCAGGTGCGGCCGGGCCAGGCGGT
GGGCGTGACGATGGCGGCCTACCCGGGCGAGCGGCTCGCCGGGCGGGTGTCGGCCATCCTTCCGGAGGCCGCCGCGGAAA
GCCGGACCCTGACCGCCCGCATCGAACTGCCCAACCGGGGCGGACGGCTGCGCCCAGGCATGTACGGGCAGGCGCAGTTC
GCGGGCGCGGCCTCGCCTGCGCTGCTCGTTCCATCCGAGGCGGTGATCCGCACCGGCCGCCGCGCGCTCGTCATGCTGGC
GCAGCCCGGCGGCCGGTTCCGGCCGGCCGAGGTGCAGGTCGGCCGTGAGGCCGGCGACCGCACCGAGATCCTGGCGGGGC
TTCAGGCCGGCGAGCAGGTGGTGGCTTCGGGCCAGTTCCTGCTGGACTCCGAAGCCAGCCTCGCCGGACTGGATGCGCGC
CCCCTCGGCCCCACGGCGCCGGCGCAGGCGCAGCCCGGCGCCTACGAGACCACCGGGCGGATCGAGCGGCTTGAGGGGCG
CTCCATCACCCTGAGCCACCAGCCTGTGCCGGCGCTGCAGTGGCCGGCCATGACCATGACCTTCACCCTCGCCGATCCGA
GGCTGGCGGCCGGCCTCAAGGAGGACGACACGGTGCGCTTCGCCTTCGACCAGGCCGGCGGCGTCGCGACCGTGCGCCGC
ATCGCCAAGCTGGAGGCGGGCCGTTGA

Upstream 100 bases:

>100_bases
CCTTCACCGAGCTCGCGGAGGTGCGCCTGACCGTGATTGAGCGGGAAGCCGCCGCCGTCCGCGCGGCGGTCCAGATCAAC
CTCGGCTACGGCGAGGCCCC

Downstream 100 bases:

>100_bases
TCGCCGCGCTCATCCGGGCGTCGGTCCGGGGGCGGCTGCTGGTCCTGATCGCGGCGGTCGCCCTGCTCCTCGCGGGGCTC
TGGGCCGTGCGCACGACGGC

Product: secretion protein HlyD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 488; Mature: 487

Protein sequence:

>488_residues
MTPTRVSRTTLALAAAGLLAVGAGAGFGLSRLVQHSPGASAEPGREVLYWYDPMVPGQRFDRPGKSPFMDMQLVPKYADE
AGAETVAVDPARIQSLGVRLARVERGPLPSEVTAPGVVDFNGRDLVVVQARAGGFVQRTYRRAPGDVVGAGAPLADVLVP
EWGGAQAEFLAVRRTKDAALTAAARQRLALLGMPPGLIAAVERSGRPQTTFRVTAPAGGVIRTLGVRSGMTLSAGQTLAE
ISGLSTVWFNVAVPEAVAGQVRPGQAVGVTMAAYPGERLAGRVSAILPEAAAESRTLTARIELPNRGGRLRPGMYGQAQF
AGAASPALLVPSEAVIRTGRRALVMLAQPGGRFRPAEVQVGREAGDRTEILAGLQAGEQVVASGQFLLDSEASLAGLDAR
PLGPTAPAQAQPGAYETTGRIERLEGRSITLSHQPVPALQWPAMTMTFTLADPRLAAGLKEDDTVRFAFDQAGGVATVRR
IAKLEAGR

Sequences:

>Translated_488_residues
MTPTRVSRTTLALAAAGLLAVGAGAGFGLSRLVQHSPGASAEPGREVLYWYDPMVPGQRFDRPGKSPFMDMQLVPKYADE
AGAETVAVDPARIQSLGVRLARVERGPLPSEVTAPGVVDFNGRDLVVVQARAGGFVQRTYRRAPGDVVGAGAPLADVLVP
EWGGAQAEFLAVRRTKDAALTAAARQRLALLGMPPGLIAAVERSGRPQTTFRVTAPAGGVIRTLGVRSGMTLSAGQTLAE
ISGLSTVWFNVAVPEAVAGQVRPGQAVGVTMAAYPGERLAGRVSAILPEAAAESRTLTARIELPNRGGRLRPGMYGQAQF
AGAASPALLVPSEAVIRTGRRALVMLAQPGGRFRPAEVQVGREAGDRTEILAGLQAGEQVVASGQFLLDSEASLAGLDAR
PLGPTAPAQAQPGAYETTGRIERLEGRSITLSHQPVPALQWPAMTMTFTLADPRLAAGLKEDDTVRFAFDQAGGVATVRR
IAKLEAGR
>Mature_487_residues
TPTRVSRTTLALAAAGLLAVGAGAGFGLSRLVQHSPGASAEPGREVLYWYDPMVPGQRFDRPGKSPFMDMQLVPKYADEA
GAETVAVDPARIQSLGVRLARVERGPLPSEVTAPGVVDFNGRDLVVVQARAGGFVQRTYRRAPGDVVGAGAPLADVLVPE
WGGAQAEFLAVRRTKDAALTAAARQRLALLGMPPGLIAAVERSGRPQTTFRVTAPAGGVIRTLGVRSGMTLSAGQTLAEI
SGLSTVWFNVAVPEAVAGQVRPGQAVGVTMAAYPGERLAGRVSAILPEAAAESRTLTARIELPNRGGRLRPGMYGQAQFA
GAASPALLVPSEAVIRTGRRALVMLAQPGGRFRPAEVQVGREAGDRTEILAGLQAGEQVVASGQFLLDSEASLAGLDARP
LGPTAPAQAQPGAYETTGRIERLEGRSITLSHQPVPALQWPAMTMTFTLADPRLAAGLKEDDTVRFAFDQAGGVATVRRI
AKLEAGR

Specific function: Component of the sil cation efflux system that confers resistance to silver. May be part of a three-component cation/proton antiporter [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

Organism=Escherichia coli, GI1786787, Length=390, Percent_Identity=40.2564102564103, Blast_Score=284, Evalue=7e-78,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006143 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50899; Mature: 50768

Theoretical pI: Translated: 10.76; Mature: 10.76

Prosite motif: PS00687 ALDEHYDE_DEHYDR_GLU

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPTRVSRTTLALAAAGLLAVGAGAGFGLSRLVQHSPGASAEPGREVLYWYDPMVPGQRF
CCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHC
DRPGKSPFMDMQLVPKYADEAGAETVAVDPARIQSLGVRLARVERGPLPSEVTAPGVVDF
CCCCCCCCCCCEECCHHHHHCCCCEEEECHHHHHHHHHEEEECCCCCCCCCCCCCCEEEE
NGRDLVVVQARAGGFVQRTYRRAPGDVVGAGAPLADVLVPEWGGAQAEFLAVRRTKDAAL
CCCEEEEEEECCCCHHHHHHHCCCCCEEECCCCHHHHCCCCCCCCCEEEEEEECCCHHHH
TAAARQRLALLGMPPGLIAAVERSGRPQTTFRVTAPAGGVIRTLGVRSGMTLSAGQTLAE
HHHHHHHEEEECCCCHHHHHHHCCCCCCEEEEEECCCCCEEEEHHCCCCCEECCCCHHHH
ISGLSTVWFNVAVPEAVAGQVRPGQAVGVTMAAYPGERLAGRVSAILPEAAAESRTLTAR
HCCCEEEEEEEECCHHHHCCCCCCCEEEEEEEECCCHHHHHHHHHHCCHHHCCCCEEEEE
IELPNRGGRLRPGMYGQAQFAGAASPALLVPSEAVIRTGRRALVMLAQPGGRFRPAEVQV
EECCCCCCCCCCCCCCCCEECCCCCCEEECCCHHHHHCCCEEEEEEECCCCCCCCCCEEE
GREAGDRTEILAGLQAGEQVVASGQFLLDSEASLAGLDARPLGPTAPAQAQPGAYETTGR
CCCCCCHHHHHHHHHCCHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
IERLEGRSITLSHQPVPALQWPAMTMTFTLADPRLAAGLKEDDTVRFAFDQAGGVATVRR
EEEECCCEEEECCCCCCCCCCCCEEEEEEECCCHHHCCCCCCCEEEEEECCCCCHHHHHH
IAKLEAGR
HHHHCCCC
>Mature Secondary Structure 
TPTRVSRTTLALAAAGLLAVGAGAGFGLSRLVQHSPGASAEPGREVLYWYDPMVPGQRF
CCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHC
DRPGKSPFMDMQLVPKYADEAGAETVAVDPARIQSLGVRLARVERGPLPSEVTAPGVVDF
CCCCCCCCCCCEECCHHHHHCCCCEEEECHHHHHHHHHEEEECCCCCCCCCCCCCCEEEE
NGRDLVVVQARAGGFVQRTYRRAPGDVVGAGAPLADVLVPEWGGAQAEFLAVRRTKDAAL
CCCEEEEEEECCCCHHHHHHHCCCCCEEECCCCHHHHCCCCCCCCCEEEEEEECCCHHHH
TAAARQRLALLGMPPGLIAAVERSGRPQTTFRVTAPAGGVIRTLGVRSGMTLSAGQTLAE
HHHHHHHEEEECCCCHHHHHHHCCCCCCEEEEEECCCCCEEEEHHCCCCCEECCCCHHHH
ISGLSTVWFNVAVPEAVAGQVRPGQAVGVTMAAYPGERLAGRVSAILPEAAAESRTLTAR
HCCCEEEEEEEECCHHHHCCCCCCCEEEEEEEECCCHHHHHHHHHHCCHHHCCCCEEEEE
IELPNRGGRLRPGMYGQAQFAGAASPALLVPSEAVIRTGRRALVMLAQPGGRFRPAEVQV
EECCCCCCCCCCCCCCCCEECCCCCCEEECCCHHHHHCCCEEEEEEECCCCCCCCCCEEE
GREAGDRTEILAGLQAGEQVVASGQFLLDSEASLAGLDARPLGPTAPAQAQPGAYETTGR
CCCCCCHHHHHHHHHCCHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
IERLEGRSITLSHQPVPALQWPAMTMTFTLADPRLAAGLKEDDTVRFAFDQAGGVATVRR
EEEECCCEEEECCCCCCCCCCCCEEEEEEECCCHHHCCCCCCCEEEEEECCCCCHHHHHH
IAKLEAGR
HHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9930866 [H]