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The map label for this gene is nccB [H]

Identifier: 197104897

GI number: 197104897

Start: 1622993

End: 1624153

Strand: Direct

Name: nccB [H]

Synonym: PHZ_c1432

Alternate gene names: 197104897

Gene position: 1622993-1624153 (Clockwise)

Preceding gene: 197104896

Following gene: 197104898

Centisome position: 40.61

GC content: 75.97

Gene sequence:

>1161_bases
ATGAAGACCGACGATAAGCGTCTCTACGGCGCCGTCGCGGCGGCCGTCGTGCTGGCCGGTGTCGGCGGCTTCGCGCTGTC
CACCGTGATCAACCGCCCTGAAGCCCCCGCCGAAGAAGAGCACGCGGAGGAGGGGGCGCACGCCGAAGGCGAGGGCTCCG
AGGTCAAGCTGACCCCGCAGCAGGCGAGCGCCGCCGGGATTGCGGTGGTCACCGTCTCGAGCGGCGGAGCCGGCGACCTG
CGCCTCACCGGGCGGGTGGAAGCCTCGCCGAGCGCGCGGGCGGCCGTGGCCGCGCCGGTGTCCGGGTCCGTGGTCCGCGT
GCTGGTCGCGCCGGGCGCCAACGTGGGCGCCGGGGCCGGTCTCGCCGTGATCCGGAGCGCCGACGGCGCCGCGGTCCGGG
CCGAGTCCGTCGCCGCCGGCGCAGAGGCGGAAGCCGCACGGGCGGCGCTCGCGCGGGAAGAGCGTCTGTTCAGCGCGGGC
GTCACCGCGCGCCAGGACTTCGAAGCGGCGCGAGCCGCCGCGGCCCGGGCCAGCGCCGAAGCGGTCGCCGCGAGAGCCAA
GCTGGCTGCGGCGGGCGGACCAGGCGCTTCGGGCGAGACCCTCATCCGCAGCCCGATCGCCGGGATCGTCACGGGTTTGC
AGGTGGCGCCCGGCGGCTTCGTCAGCCAGGGCGGCGCGGTCGCCGAGGTGGCCAACCCCGCTCAGGTCGAGGTGGTCTTC
AACGCCCCGGCGGAGGCCGCCGCCAAGCTACGGGTCGGCGCGCCGCTCAGGGTCATCGGCTCCGACGGGGCGGAGGCCGA
CGCGGTTATCGTCGGCGTCGCACCTCTGGCGCAGGGCGCCACCGGCGCGGCCGTGGTCCGCGCCAGGCCGAGCGGCGGGC
GTTTGACGCCCGGCGCCGCCGTGAGCGCCGCCATCTCCACGGAGACCGGCGGCTATCCGACGGTGCCGTCGGAAGCGGTG
CAGACGGTGGAGGGCCGCTCCATTGTGTTCGTGGCCGAGGGTGGCGGTTTCCGGGCGCAGTCCGTGACCCCCGGGCGCTC
CGGCGCCGGCTATACCCAGATCATCGCGGGCCTGAAGGGCGGCGAACGGATCGCCGGCCGCGGGGCGTTCGTGCTGAAAG
CCGAGCTCGCCAAGGGCGAAGCCGAGCACGGGGACCACTGA

Upstream 100 bases:

>100_bases
CAGAGGCGCGCGAACAGACCATCGCAGCCGCCGTCGAGCGGATCAGCGCCCAAGCCGCCATCGCGCGGCTGAGCGTCGTC
GCCACCCCTGGAGAACAATG

Downstream 100 bases:

>100_bases
CCATGCTCGGCAGGCTTGTCGCCTTCTCCGTGCGCCACCGCATCGCGGTCGTGCTCGTCACCCTGCTGGTGGCCGCCTTC
GGCGTCTCCCAGCTCTTCCG

Product: secretion protein HlyD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 386; Mature: 386

Protein sequence:

>386_residues
MKTDDKRLYGAVAAAVVLAGVGGFALSTVINRPEAPAEEEHAEEGAHAEGEGSEVKLTPQQASAAGIAVVTVSSGGAGDL
RLTGRVEASPSARAAVAAPVSGSVVRVLVAPGANVGAGAGLAVIRSADGAAVRAESVAAGAEAEAARAALAREERLFSAG
VTARQDFEAARAAAARASAEAVAARAKLAAAGGPGASGETLIRSPIAGIVTGLQVAPGGFVSQGGAVAEVANPAQVEVVF
NAPAEAAAKLRVGAPLRVIGSDGAEADAVIVGVAPLAQGATGAAVVRARPSGGRLTPGAAVSAAISTETGGYPTVPSEAV
QTVEGRSIVFVAEGGGFRAQSVTPGRSGAGYTQIIAGLKGGERIAGRGAFVLKAELAKGEAEHGDH

Sequences:

>Translated_386_residues
MKTDDKRLYGAVAAAVVLAGVGGFALSTVINRPEAPAEEEHAEEGAHAEGEGSEVKLTPQQASAAGIAVVTVSSGGAGDL
RLTGRVEASPSARAAVAAPVSGSVVRVLVAPGANVGAGAGLAVIRSADGAAVRAESVAAGAEAEAARAALAREERLFSAG
VTARQDFEAARAAAARASAEAVAARAKLAAAGGPGASGETLIRSPIAGIVTGLQVAPGGFVSQGGAVAEVANPAQVEVVF
NAPAEAAAKLRVGAPLRVIGSDGAEADAVIVGVAPLAQGATGAAVVRARPSGGRLTPGAAVSAAISTETGGYPTVPSEAV
QTVEGRSIVFVAEGGGFRAQSVTPGRSGAGYTQIIAGLKGGERIAGRGAFVLKAELAKGEAEHGDH
>Mature_386_residues
MKTDDKRLYGAVAAAVVLAGVGGFALSTVINRPEAPAEEEHAEEGAHAEGEGSEVKLTPQQASAAGIAVVTVSSGGAGDL
RLTGRVEASPSARAAVAAPVSGSVVRVLVAPGANVGAGAGLAVIRSADGAAVRAESVAAGAEAEAARAALAREERLFSAG
VTARQDFEAARAAAARASAEAVAARAKLAAAGGPGASGETLIRSPIAGIVTGLQVAPGGFVSQGGAVAEVANPAQVEVVF
NAPAEAAAKLRVGAPLRVIGSDGAEADAVIVGVAPLAQGATGAAVVRARPSGGRLTPGAAVSAAISTETGGYPTVPSEAV
QTVEGRSIVFVAEGGGFRAQSVTPGRSGAGYTQIIAGLKGGERIAGRGAFVLKAELAKGEAEHGDH

Specific function: Component of the NCC cation efflux system that confers resistance to nickel, cobalt and cadmium [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005695
- InterPro:   IPR006143 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 37382; Mature: 37382

Theoretical pI: Translated: 5.81; Mature: 5.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
0.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTDDKRLYGAVAAAVVLAGVGGFALSTVINRPEAPAEEEHAEEGAHAEGEGSEVKLTPQ
CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCEEEECCC
QASAAGIAVVTVSSGGAGDLRLTGRVEASPSARAAVAAPVSGSVVRVLVAPGANVGAGAG
CCCCCCEEEEEECCCCCCCEEEEEEEECCCCCCEEEECCCCCCEEEEEEECCCCCCCCCC
LAVIRSADGAAVRAESVAAGAEAEAARAALAREERLFSAGVTARQDFEAARAAAARASAE
EEEEECCCCCEEEHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
AVAARAKLAAAGGPGASGETLIRSPIAGIVTGLQVAPGGFVSQGGAVAEVANPAQVEVVF
HHHHHHHHEECCCCCCCCCHHHHCCHHHHHHCCEECCCCCCCCCCCEEECCCCEEEEEEE
NAPAEAAAKLRVGAPLRVIGSDGAEADAVIVGVAPLAQGATGAAVVRARPSGGRLTPGAA
ECCHHHHHEEECCCCEEEEECCCCCCCEEEEEECHHCCCCCCEEEEEECCCCCCCCCCHH
VSAAISTETGGYPTVPSEAVQTVEGRSIVFVAEGGGFRAQSVTPGRSGAGYTQIIAGLKG
EEEEEECCCCCCCCCCHHHHHHCCCCEEEEEECCCCEEECCCCCCCCCCCHHHHHHHCCC
GERIAGRGAFVLKAELAKGEAEHGDH
CCEECCCCEEEEEEEHHCCCCCCCCC
>Mature Secondary Structure
MKTDDKRLYGAVAAAVVLAGVGGFALSTVINRPEAPAEEEHAEEGAHAEGEGSEVKLTPQ
CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCEEEECCC
QASAAGIAVVTVSSGGAGDLRLTGRVEASPSARAAVAAPVSGSVVRVLVAPGANVGAGAG
CCCCCCEEEEEECCCCCCCEEEEEEEECCCCCCEEEECCCCCCEEEEEEECCCCCCCCCC
LAVIRSADGAAVRAESVAAGAEAEAARAALAREERLFSAGVTARQDFEAARAAAARASAE
EEEEECCCCCEEEHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
AVAARAKLAAAGGPGASGETLIRSPIAGIVTGLQVAPGGFVSQGGAVAEVANPAQVEVVF
HHHHHHHHEECCCCCCCCCHHHHCCHHHHHHCCEECCCCCCCCCCCEEECCCCEEEEEEE
NAPAEAAAKLRVGAPLRVIGSDGAEADAVIVGVAPLAQGATGAAVVRARPSGGRLTPGAA
ECCHHHHHEEECCCCEEEEECCCCCCCEEEEEECHHCCCCCCEEEEEECCCCCCCCCCHH
VSAAISTETGGYPTVPSEAVQTVEGRSIVFVAEGGGFRAQSVTPGRSGAGYTQIIAGLKG
EEEEEECCCCCCCCCCHHHHHHCCCCEEEEEECCCCEEECCCCCCCCCCCHHHHHHHCCC
GERIAGRGAFVLKAELAKGEAEHGDH
CCEECCCCEEEEEEEHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7961470 [H]