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The map label for this gene is zntR [H]

Identifier: 197104893

GI number: 197104893

Start: 1620085

End: 1620537

Strand: Reverse

Name: zntR [H]

Synonym: PHZ_c1428

Alternate gene names: 197104893

Gene position: 1620537-1620085 (Counterclockwise)

Preceding gene: 197104901

Following gene: 197104892

Centisome position: 40.55

GC content: 69.09

Gene sequence:

>453_bases
ATGCCGGCGCACACCATCGGAAAGCTCGCCAAAGCGGCGGACGTGAAGGTCCCGACGATTCGCTTCTATGAGCAGATCGG
CCTGCTGCCGGAACCGGACCGCACGGAGAGCGACCGACGCGTCTACGGCGACGAGGCCGTCCGCCGCCTCGCCTTCATCA
AGCATGCCCGGCAGCTCGGCTTCCCCATCGAAGCGATCCGCACCCTCCTCGACCTGGCCGACAACCCCGACCGCACGTGC
GAGGACGCCAATGCCCTGGCCCAGGAGCAGCTCACGGCCGTCGAGACCAAGATCGCGCAGCTCGAAGCGCTACGCGCCGA
GCTGAAGCGCATGGTCGCCGCCGGCTGCCATGGCCTCGCGGGCGATTGCCGTGTCATCGAGACGCTCGCCGACCACAGCC
TTTGCGCCCAGGAGCACGCCGCGCCGGAGCGGTTGGCGCCGGTCCAAGCATGA

Upstream 100 bases:

>100_bases
GCTTCGGACGAGGTGGAGCAGCTGGACATAAAGACAGCCTGCATCCTCTAGTCGCTAGAGGATCAAGCGCCTATTTTTCA
GCATCTCAGCGGAGATCCCA

Downstream 100 bases:

>100_bases
CCACCTGCTCTCACGTCCACGCGTCGAACCTGCCGGCGCAGGTCATCACCACTACACCCACAGCTACAGCGCGGGCTGAG
CGAACTCGAGAGTACACCTC

Product: transcriptional regulator, MerR family

Products: NA

Alternate protein names: Zn(II)-responsive regulator of zntA [H]

Number of amino acids: Translated: 150; Mature: 149

Protein sequence:

>150_residues
MPAHTIGKLAKAADVKVPTIRFYEQIGLLPEPDRTESDRRVYGDEAVRRLAFIKHARQLGFPIEAIRTLLDLADNPDRTC
EDANALAQEQLTAVETKIAQLEALRAELKRMVAAGCHGLAGDCRVIETLADHSLCAQEHAAPERLAPVQA

Sequences:

>Translated_150_residues
MPAHTIGKLAKAADVKVPTIRFYEQIGLLPEPDRTESDRRVYGDEAVRRLAFIKHARQLGFPIEAIRTLLDLADNPDRTC
EDANALAQEQLTAVETKIAQLEALRAELKRMVAAGCHGLAGDCRVIETLADHSLCAQEHAAPERLAPVQA
>Mature_149_residues
PAHTIGKLAKAADVKVPTIRFYEQIGLLPEPDRTESDRRVYGDEAVRRLAFIKHARQLGFPIEAIRTLLDLADNPDRTCE
DANALAQEQLTAVETKIAQLEALRAELKRMVAAGCHGLAGDCRVIETLADHSLCAQEHAAPERLAPVQA

Specific function: Zinc-responsive transcriptional regulator of zntA [H]

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH merR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789687, Length=130, Percent_Identity=40.7692307692308, Blast_Score=100, Evalue=8e-23,
Organism=Escherichia coli, GI1786695, Length=126, Percent_Identity=30.952380952381, Blast_Score=74, Evalue=6e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551
- InterPro:   IPR015358
- InterPro:   IPR011788 [H]

Pfam domain/function: PF00376 MerR; PF09278 MerR-DNA-bind [H]

EC number: NA

Molecular weight: Translated: 16459; Mature: 16328

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: PS00552 HTH_MERR_1 ; PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAHTIGKLAKAADVKVPTIRFYEQIGLLPEPDRTESDRRVYGDEAVRRLAFIKHARQLG
CCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
FPIEAIRTLLDLADNPDRTCEDANALAQEQLTAVETKIAQLEALRAELKRMVAAGCHGLA
CCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GDCRVIETLADHSLCAQEHAAPERLAPVQA
CHHHHHHHHHHHHHHHHHHCCHHHCCCCCC
>Mature Secondary Structure 
PAHTIGKLAKAADVKVPTIRFYEQIGLLPEPDRTESDRRVYGDEAVRRLAFIKHARQLG
CCHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
FPIEAIRTLLDLADNPDRTCEDANALAQEQLTAVETKIAQLEALRAELKRMVAAGCHGLA
CCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GDCRVIETLADHSLCAQEHAAPERLAPVQA
CHHHHHHHHHHHHHHHHHHCCHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]