Click here to switch to the map view.

The map label for this gene is flaF [H]

Identifier: 197104849

GI number: 197104849

Start: 1565782

End: 1566096

Strand: Direct

Name: flaF [H]

Synonym: PHZ_c1383

Alternate gene names: 197104849

Gene position: 1565782-1566096 (Clockwise)

Preceding gene: 197104848

Following gene: 197104850

Centisome position: 39.18

GC content: 68.57

Gene sequence:

>315_bases
ATGGAGTATCGCCTGTTCGCGCAGGTGACGCGGGCTCTGATGGAGGCCGCCAAGCTCCCCGCCGACGACCTCAAGGGGCG
TATGGACGCCCTGGACTGGAACCGCCGCGTCTGGTCCGTGCTGGGCGCGGACTGCCAGCAGACGGGCAACGGCCTGCCGC
GCGAGCTGCGGGCCTCGATCATCTCGCTCAGCATCTGGGTGGGCAAGCACACCAGCCTGGTCATCCGCCAGCAGGAGGAG
ATCGAGCCCCTGATCGAGATCAACCGCATGATCATGCAGGGGCTGAGCGGAGCCAGCGAGGCCGCCGCGGCCTGA

Upstream 100 bases:

>100_bases
ATGCTGTGCCGGAGGCTCATCGAGTACGAAGACGAGAGGTTGGGGAATGTCCCTTCAGGCCTATCAGCAGGCGGCGACGC
GGGCTGAGAGCCCGCGCGAG

Downstream 100 bases:

>100_bases
CGCGGCGCAGCAGGTCCGAACCCATCAGGCCGCGGCTCGCCCGCGGCCTTTTTCTTGCGCGCCCGGATTGGGTCGGCAGG
TCCTGCCGGGCTGCAGGTTT

Product: flagellar biosynthesis regulatory protein FlaF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MEYRLFAQVTRALMEAAKLPADDLKGRMDALDWNRRVWSVLGADCQQTGNGLPRELRASIISLSIWVGKHTSLVIRQQEE
IEPLIEINRMIMQGLSGASEAAAA

Sequences:

>Translated_104_residues
MEYRLFAQVTRALMEAAKLPADDLKGRMDALDWNRRVWSVLGADCQQTGNGLPRELRASIISLSIWVGKHTSLVIRQQEE
IEPLIEINRMIMQGLSGASEAAAA
>Mature_104_residues
MEYRLFAQVTRALMEAAKLPADDLKGRMDALDWNRRVWSVLGADCQQTGNGLPRELRASIISLSIWVGKHTSLVIRQQEE
IEPLIEINRMIMQGLSGASEAAAA

Specific function: Required for synthesis of the 25 kDa and 27 kDa flagellins and appears to be important for flagellin assembly [H]

COG id: COG5442

COG function: function code N; Flagellar biosynthesis regulator FlaF

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010845 [H]

Pfam domain/function: PF07309 FlaF [H]

EC number: NA

Molecular weight: Translated: 11580; Mature: 11580

Theoretical pI: Translated: 5.87; Mature: 5.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEYRLFAQVTRALMEAAKLPADDLKGRMDALDWNRRVWSVLGADCQQTGNGLPRELRASI
CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHH
ISLSIWVGKHTSLVIRQQEEIEPLIEINRMIMQGLSGASEAAAA
HHHHHHHCCCHHHEECCHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MEYRLFAQVTRALMEAAKLPADDLKGRMDALDWNRRVWSVLGADCQQTGNGLPRELRASI
CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHH
ISLSIWVGKHTSLVIRQQEEIEPLIEINRMIMQGLSGASEAAAA
HHHHHHHCCCHHHEECCHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1699845; 11259647 [H]