| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197104844
Identifier: 197104844
GI number: 197104844
Start: 1560697
End: 1561545
Strand: Reverse
Name: 197104844
Synonym: PHZ_c1378
Alternate gene names: NA
Gene position: 1561545-1560697 (Counterclockwise)
Preceding gene: 197104845
Following gene: 197104843
Centisome position: 39.08
GC content: 72.91
Gene sequence:
>849_bases ATGAAGCCGCTGCTCTTCCTGGCCGCCGTCTCGGCTCTCCCGCTGGCCGCCGCCTGCACGCCGCAGGCCAAGGCGCCGCG TGTGGCCCTCGACTGCCCCGCGACCCAGGGCGAGCTGACGCGGACGGCGATGGCCCAGGACGGCAAGAGCTGCATCTACG CCTCCGCCGAGGGCGCCGAGGTGACGCTGCGCCTCATCCCGGTGTCAGGGACCGCCTTCGCGACCCTGGACCGCCTCGAA GAGACCCTGCTCGCCGAATCGGCGAAGGCGGCGGAAGCGGCCGAAGCCGCCGCGCCGCAGGCGGACACCCGCCCCTCGCC GCAGAGCGCCGCAGAGGCCGAACGCGCCGCCGCCGAGGCCGCGAAGGACGCCGGCGCCGCCGCCCAGGTGGCCGACGCCG GCGATGCGGCCGAGGAAGGCATGGGAAGCGTCGACGGCGTCGACGTCCGGCTCGAGAAGGGCAAGGTGGTGGTCGAGGAC GGCCGCGAGACCACCCGCATCGACCTGCCCGGCATCCAGATCGTCGCCGACGAGGCGAACGACTCCGCCCAGATCCGGAT CGGGCCGCTGCACGTGGACGCCAGCGGCGAGGAAGCCAAGGTGCAGATTCGCCGGGAGGTCCGCCTGAAGGGCGAGGCCC TGGCCCGCGAGAAGCGCGGCGTCCGCGCCACCTTCATCTCCAGCGGCAAGTCCGCCGCCGACGGCCGGCGCTTCGTGGGC TATGAAGCGGGCGGCCCCAAGACGGGGCCGCTGACCGTCGCCATCGTCCACTCGAAATCCGCGCTGGACGACGATGACAA CGTCTATCGCGACATCAAGAAGCTGGTGCGGAAGAACGGCGGGGTCTGA
Upstream 100 bases:
>100_bases TCCAAGCGGGGCCGCCAACGACCCCCTTACGGCGAATTCACTCGCTTTTCGAAGGGGCTCCGGCCAGTTTCCTGAGGGAA CGGACCGGAGCCCTAATCGC
Downstream 100 bases:
>100_bases TCGTTTTTCTGGAAGTCGTCGCGCGCGCCTGTCGGCTCGGCCGGCGCCGGACCGTCCTTGCTGCAGTCGTAGACTGGAGC AGCAGGATGAGAAAGTTGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 282; Mature: 282
Protein sequence:
>282_residues MKPLLFLAAVSALPLAAACTPQAKAPRVALDCPATQGELTRTAMAQDGKSCIYASAEGAEVTLRLIPVSGTAFATLDRLE ETLLAESAKAAEAAEAAAPQADTRPSPQSAAEAERAAAEAAKDAGAAAQVADAGDAAEEGMGSVDGVDVRLEKGKVVVED GRETTRIDLPGIQIVADEANDSAQIRIGPLHVDASGEEAKVQIRREVRLKGEALAREKRGVRATFISSGKSAADGRRFVG YEAGGPKTGPLTVAIVHSKSALDDDDNVYRDIKKLVRKNGGV
Sequences:
>Translated_282_residues MKPLLFLAAVSALPLAAACTPQAKAPRVALDCPATQGELTRTAMAQDGKSCIYASAEGAEVTLRLIPVSGTAFATLDRLE ETLLAESAKAAEAAEAAAPQADTRPSPQSAAEAERAAAEAAKDAGAAAQVADAGDAAEEGMGSVDGVDVRLEKGKVVVED GRETTRIDLPGIQIVADEANDSAQIRIGPLHVDASGEEAKVQIRREVRLKGEALAREKRGVRATFISSGKSAADGRRFVG YEAGGPKTGPLTVAIVHSKSALDDDDNVYRDIKKLVRKNGGV >Mature_282_residues MKPLLFLAAVSALPLAAACTPQAKAPRVALDCPATQGELTRTAMAQDGKSCIYASAEGAEVTLRLIPVSGTAFATLDRLE ETLLAESAKAAEAAEAAAPQADTRPSPQSAAEAERAAAEAAKDAGAAAQVADAGDAAEEGMGSVDGVDVRLEKGKVVVED GRETTRIDLPGIQIVADEANDSAQIRIGPLHVDASGEEAKVQIRREVRLKGEALAREKRGVRATFISSGKSAADGRRFVG YEAGGPKTGPLTVAIVHSKSALDDDDNVYRDIKKLVRKNGGV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29151; Mature: 29151
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPLLFLAAVSALPLAAACTPQAKAPRVALDCPATQGELTRTAMAQDGKSCIYASAEGAE CCHHHHHHHHHHCCHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHCCCCEEEEECCCCCE VTLRLIPVSGTAFATLDRLEETLLAESAKAAEAAEAAAPQADTRPSPQSAAEAERAAAEA EEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH AKDAGAAAQVADAGDAAEEGMGSVDGVDVRLEKGKVVVEDGRETTRIDLPGIQIVADEAN HHHCCCHHHHCCCCCHHHHCCCCCCCEEEEEECCEEEEECCCCEEEEECCCEEEEEECCC DSAQIRIGPLHVDASGEEAKVQIRREVRLKGEALAREKRGVRATFISSGKSAADGRRFVG CCCEEEEEEEEECCCCCHHHEEEEHHHHHCHHHHHHHHCCCEEEEECCCCCCCCCCEEEE YEAGGPKTGPLTVAIVHSKSALDDDDNVYRDIKKLVRKNGGV ECCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKPLLFLAAVSALPLAAACTPQAKAPRVALDCPATQGELTRTAMAQDGKSCIYASAEGAE CCHHHHHHHHHHCCHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHCCCCEEEEECCCCCE VTLRLIPVSGTAFATLDRLEETLLAESAKAAEAAEAAAPQADTRPSPQSAAEAERAAAEA EEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH AKDAGAAAQVADAGDAAEEGMGSVDGVDVRLEKGKVVVEDGRETTRIDLPGIQIVADEAN HHHCCCHHHHCCCCCHHHHCCCCCCCEEEEEECCEEEEECCCCEEEEECCCEEEEEECCC DSAQIRIGPLHVDASGEEAKVQIRREVRLKGEALAREKRGVRATFISSGKSAADGRRFVG CCCEEEEEEEEECCCCCHHHEEEEHHHHHCHHHHHHHHCCCEEEEECCCCCCCCCCEEEE YEAGGPKTGPLTVAIVHSKSALDDDDNVYRDIKKLVRKNGGV ECCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA