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The map label for this gene is yfdR [C]

Identifier: 197104840

GI number: 197104840

Start: 1557984

End: 1558625

Strand: Reverse

Name: yfdR [C]

Synonym: PHZ_c1374

Alternate gene names: 197104840

Gene position: 1558625-1557984 (Counterclockwise)

Preceding gene: 197104843

Following gene: 197104839

Centisome position: 39.0

GC content: 69.16

Gene sequence:

>642_bases
GTGAGGAAAGGGCTGCGTCGCGGCAAGGAACCCAGAGCCTGGCAGCGCATGCTGTCCGGCCGCCGGCTGGACCTGCTCGA
CCCCTCCCCCATGGACATCGAGATCGAGGACATCGCCCACGGCCTCGCGCGGGTCGCGCGCTGGAACGGCCAGACGGTGG
GCGAGCACGCCTTCTCGGTCGCCCAGCACTCGGTGGTCGTCGAGGAGATCGTCGCCCACATCCAGCCCGACGTTGAGCCC
CGCTGGCGTCTCGCGGCCCTGCTGCACGACGCGTCCGAGTACGTGATCGGCGACATGATCTCGCCGTTCAAGGCGGCGCT
GGGGATGGACTACAAGCTGTTCGAGGAGCGGCTGGAGAACGCCATCCACGTACGGTTCGGCCTGCCAGCGAAGACCCCGG
CGACGGTCAAGAAGCTGATCAAGCAGGCCGACCGGGCCTGCGCCTTCTTCGAGGCGACCCAGCTCGCGGGATTCACCCAC
GCCGAGGCGCTGGACTTCTTCGGCGCGCCGCCGGCGGGCTACAGCCTGACGATCGAGCCGCTCGCCCCCTTCGACGCCCA
GGACCGGTATCTCCATCGCTTCGAGGTCCTGTCCGAGGCCGCGGGATACCGCTCGGCCGACCAGGCCTTCGTCACGGAGT
GA

Upstream 100 bases:

>100_bases
TTCATCTGCCCCGCGTCTGGACCCAGGGGACCTGCCCCTGCATTGATCTTTCTCAGGTCCTGGGCCAGTTCACGGCCTCG
ACTGTGGAGGGAATGCGCCG

Downstream 100 bases:

>100_bases
GCATGGTCGTCATCGGGCTCTCGGCGGTGGTGGTGGCGATCCGCGACGGCGAGGCCGTCGTGCTGACCGTCCGCCCCAAG
GCCGGGGGCGCCGAGCTGTC

Product: hypothetical protein

Products: NA

Alternate protein names: ORF5 [H]

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MRKGLRRGKEPRAWQRMLSGRRLDLLDPSPMDIEIEDIAHGLARVARWNGQTVGEHAFSVAQHSVVVEEIVAHIQPDVEP
RWRLAALLHDASEYVIGDMISPFKAALGMDYKLFEERLENAIHVRFGLPAKTPATVKKLIKQADRACAFFEATQLAGFTH
AEALDFFGAPPAGYSLTIEPLAPFDAQDRYLHRFEVLSEAAGYRSADQAFVTE

Sequences:

>Translated_213_residues
MRKGLRRGKEPRAWQRMLSGRRLDLLDPSPMDIEIEDIAHGLARVARWNGQTVGEHAFSVAQHSVVVEEIVAHIQPDVEP
RWRLAALLHDASEYVIGDMISPFKAALGMDYKLFEERLENAIHVRFGLPAKTPATVKKLIKQADRACAFFEATQLAGFTH
AEALDFFGAPPAGYSLTIEPLAPFDAQDRYLHRFEVLSEAAGYRSADQAFVTE
>Mature_213_residues
MRKGLRRGKEPRAWQRMLSGRRLDLLDPSPMDIEIEDIAHGLARVARWNGQTVGEHAFSVAQHSVVVEEIVAHIQPDVEP
RWRLAALLHDASEYVIGDMISPFKAALGMDYKLFEERLENAIHVRFGLPAKTPATVKKLIKQADRACAFFEATQLAGFTH
AEALDFFGAPPAGYSLTIEPLAPFDAQDRYLHRFEVLSEAAGYRSADQAFVTE

Specific function: Unknown

COG id: COG1896

COG function: function code R; Predicted hydrolases of HD superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082090, Length=189, Percent_Identity=30.6878306878307, Blast_Score=70, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003607 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23854; Mature: 23854

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKGLRRGKEPRAWQRMLSGRRLDLLDPSPMDIEIEDIAHGLARVARWNGQTVGEHAFSV
CCCCCCCCCCCHHHHHHHCCCCEECCCCCCCCEEHHHHHHHHHHHHHCCCCCHHHHHHHH
AQHSVVVEEIVAHIQPDVEPRWRLAALLHDASEYVIGDMISPFKAALGMDYKLFEERLEN
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
AIHVRFGLPAKTPATVKKLIKQADRACAFFEATQLAGFTHAEALDFFGAPPAGYSLTIEP
HEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCEEEECC
LAPFDAQDRYLHRFEVLSEAAGYRSADQAFVTE
CCCCCCHHHHHHHHHHHHHHHCCCCCCHHHCCC
>Mature Secondary Structure
MRKGLRRGKEPRAWQRMLSGRRLDLLDPSPMDIEIEDIAHGLARVARWNGQTVGEHAFSV
CCCCCCCCCCCHHHHHHHCCCCEECCCCCCCCEEHHHHHHHHHHHHHCCCCCHHHHHHHH
AQHSVVVEEIVAHIQPDVEPRWRLAALLHDASEYVIGDMISPFKAALGMDYKLFEERLEN
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
AIHVRFGLPAKTPATVKKLIKQADRACAFFEATQLAGFTHAEALDFFGAPPAGYSLTIEP
HEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCEEEECC
LAPFDAQDRYLHRFEVLSEAAGYRSADQAFVTE
CCCCCCHHHHHHHHHHHHHHHCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8282711 [H]