| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is hit [H]
Identifier: 197104767
GI number: 197104767
Start: 1479699
End: 1480133
Strand: Direct
Name: hit [H]
Synonym: PHZ_c1301
Alternate gene names: 197104767
Gene position: 1479699-1480133 (Clockwise)
Preceding gene: 197104766
Following gene: 197104772
Centisome position: 37.03
GC content: 67.82
Gene sequence:
>435_bases ATGCTGGACGGCGCCTACGACCCCGACAACATCTTCGCGAAGATCCTGCGCGGCGAGATGGCCTGCGCCCGGGTGTTCGA GGACGAGCACGTCTTCTCGTTCATGGATGTCTTCCCGCAGTCCAGGGGGCACACGCTGGTGATCCCCAAGCACACGACGG CGCGCAATCTGCTGGAGGAGGAGCCCGAACGCCTCTCCCACCTGATCCTGGGCGTCCAGCGGGTGGCCAAGGCGGTGCGG GCCGCGCTGAACCCCGACGGCCTGGTGATCACCCAGTTCAACGGCGCGCCGGCGGGCCAGACGATCTACCACCTGCACGT CCACATCATCCCGCGCTGGGAAGGCGTGCCGGTGGGCCGCCACGCCTCGGGCGGCATGGCCGACATGGATGAGCTGAAGG CGCTGGCCGAGCAGATCTCGGCGAAGATCAGCTGA
Upstream 100 bases:
>100_bases CGGGCGTGGAGGAGGAGATCGAATGGCTCGCCGAGGAGTTCTCGCCGTTCCGGCAGGGCGGCTGATTTGCTACGAGCGCT GGGTTGATCAGGAGTGACCC
Downstream 100 bases:
>100_bases CGCGACAAGGCCCCGGAGATCGCTCTCTGCGATCGCTCTCCGGGGCCCTTCGCTTTTCCTCGTAGACCGCCGCTCAGTCG ACCGGCTCGGTCTCCTCGGC
Product: diadenosine tetraphosphate (Ap4A) hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 144; Mature: 144
Protein sequence:
>144_residues MLDGAYDPDNIFAKILRGEMACARVFEDEHVFSFMDVFPQSRGHTLVIPKHTTARNLLEEEPERLSHLILGVQRVAKAVR AALNPDGLVITQFNGAPAGQTIYHLHVHIIPRWEGVPVGRHASGGMADMDELKALAEQISAKIS
Sequences:
>Translated_144_residues MLDGAYDPDNIFAKILRGEMACARVFEDEHVFSFMDVFPQSRGHTLVIPKHTTARNLLEEEPERLSHLILGVQRVAKAVR AALNPDGLVITQFNGAPAGQTIYHLHVHIIPRWEGVPVGRHASGGMADMDELKALAEQISAKIS >Mature_144_residues MLDGAYDPDNIFAKILRGEMACARVFEDEHVFSFMDVFPQSRGHTLVIPKHTTARNLLEEEPERLSHLILGVQRVAKAVR AALNPDGLVITQFNGAPAGQTIYHLHVHIIPRWEGVPVGRHASGGMADMDELKALAEQISAKIS
Specific function: Unknown
COG id: COG0537
COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HIT domain [H]
Homologues:
Organism=Homo sapiens, GI4885413, Length=105, Percent_Identity=36.1904761904762, Blast_Score=65, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17506713, Length=104, Percent_Identity=32.6923076923077, Blast_Score=64, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6320078, Length=140, Percent_Identity=30.7142857142857, Blast_Score=69, Evalue=3e-13, Organism=Drosophila melanogaster, GI24581222, Length=108, Percent_Identity=39.8148148148148, Blast_Score=73, Evalue=7e-14, Organism=Drosophila melanogaster, GI28574010, Length=108, Percent_Identity=39.8148148148148, Blast_Score=72, Evalue=9e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011146 - InterPro: IPR011151 - InterPro: IPR019808 - InterPro: IPR001310 [H]
Pfam domain/function: PF01230 HIT [H]
EC number: NA
Molecular weight: Translated: 15888; Mature: 15888
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS51084 HIT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDGAYDPDNIFAKILRGEMACARVFEDEHVFSFMDVFPQSRGHTLVIPKHTTARNLLEE CCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHH EPERLSHLILGVQRVAKAVRAALNPDGLVITQFNGAPAGQTIYHLHVHIIPRWEGVPVGR HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEEEEEEEECCCCCCCCC HASGGMADMDELKALAEQISAKIS CCCCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MLDGAYDPDNIFAKILRGEMACARVFEDEHVFSFMDVFPQSRGHTLVIPKHTTARNLLEE CCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHH EPERLSHLILGVQRVAKAVRAALNPDGLVITQFNGAPAGQTIYHLHVHIIPRWEGVPVGR HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEEEEEEEECCCCCCCCC HASGGMADMDELKALAEQISAKIS CCCCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9579061; 9384377 [H]