Definition Phenylobacterium zucineum HLK1, complete genome.
Accession NC_011144
Length 3,996,255

Click here to switch to the map view.

The map label for this gene is 197104763

Identifier: 197104763

GI number: 197104763

Start: 1476631

End: 1477197

Strand: Direct

Name: 197104763

Synonym: PHZ_c1297

Alternate gene names: NA

Gene position: 1476631-1477197 (Clockwise)

Preceding gene: 197104761

Following gene: 197104764

Centisome position: 36.95

GC content: 64.37

Gene sequence:

>567_bases
GTGCAGACGGTCATTGTGCGCTGCACAATTTCCTTGACTGCTGCACTGCAACATGGGACAAGAGCCTACGTTTCCGTTGG
GGCATTGCGCCTCGCAAGTCCGCTTCCTCCCCATTCGTCAGGAGTTCGCCCCATGGCCGCCGCCGAAGCCGCTAAGACCA
CCGTCGAACAGTTCACCACCGCCAGCAACGTCGCCTTCAAGGACGGCGTCGAGAAGACCCTGGCCGCGCTGAACGAGATG
AACGCCCACTCCAAGCAGAACCTGGAAGCCGTGGTCGCCTCGGTGACCGCCGCCACCAAGGGCGCCGAAGCCCTGGGCGC
GCAGGCGATGGCCTTCTCCAAGAGCGCCTTCGACAACCAGGTGAACGCGGCCCGCTCGCTCGCCGGCGCCAAGAGCGTCC
AGGAAGTGATGGAGCTGCAGTCCGCCTTCGCCAAGACCGCCCTCGAGACCTACATGGCCGAGATGGGCAAGATGACCGAG
ACGGTGTCGGCCTCGATGAAGGAATCGATGAAGCCGCTCAACGAGCGGATGACCGCCGCCGTCGAGAAGCTGCAGGCCGT
CCGCTAG

Upstream 100 bases:

>100_bases
GGCTACGGCGCCGCCGTGAGCTGCCTACCATGACAGCCGTAGCCTTGATGCAGAGTAAACAGATGTTGAAAGGACGAATT
GCCGCGCCTGCGCAGGACGT

Downstream 100 bases:

>100_bases
GACCATCCGCGAGTTCGATCGAGACGAGGGCCGGCCCGCAAGGGACCGGCCCTTTTCTCATGCCCTTTTCTCATGGGCGG
GCGGGCGCTAGAGGTTCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MQTVIVRCTISLTAALQHGTRAYVSVGALRLASPLPPHSSGVRPMAAAEAAKTTVEQFTTASNVAFKDGVEKTLAALNEM
NAHSKQNLEAVVASVTAATKGAEALGAQAMAFSKSAFDNQVNAARSLAGAKSVQEVMELQSAFAKTALETYMAEMGKMTE
TVSASMKESMKPLNERMTAAVEKLQAVR

Sequences:

>Translated_188_residues
MQTVIVRCTISLTAALQHGTRAYVSVGALRLASPLPPHSSGVRPMAAAEAAKTTVEQFTTASNVAFKDGVEKTLAALNEM
NAHSKQNLEAVVASVTAATKGAEALGAQAMAFSKSAFDNQVNAARSLAGAKSVQEVMELQSAFAKTALETYMAEMGKMTE
TVSASMKESMKPLNERMTAAVEKLQAVR
>Mature_188_residues
MQTVIVRCTISLTAALQHGTRAYVSVGALRLASPLPPHSSGVRPMAAAEAAKTTVEQFTTASNVAFKDGVEKTLAALNEM
NAHSKQNLEAVVASVTAATKGAEALGAQAMAFSKSAFDNQVNAARSLAGAKSVQEVMELQSAFAKTALETYMAEMGKMTE
TVSASMKESMKPLNERMTAAVEKLQAVR

Specific function: Unknown

COG id: COG5490

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19738; Mature: 19738

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
5.9 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTVIVRCTISLTAALQHGTRAYVSVGALRLASPLPPHSSGVRPMAAAEAAKTTVEQFTT
CCEEEEEEHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
ASNVAFKDGVEKTLAALNEMNAHSKQNLEAVVASVTAATKGAEALGAQAMAFSKSAFDNQ
HHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
VNAARSLAGAKSVQEVMELQSAFAKTALETYMAEMGKMTETVSASMKESMKPLNERMTAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VEKLQAVR
HHHHHHCC
>Mature Secondary Structure
MQTVIVRCTISLTAALQHGTRAYVSVGALRLASPLPPHSSGVRPMAAAEAAKTTVEQFTT
CCEEEEEEHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
ASNVAFKDGVEKTLAALNEMNAHSKQNLEAVVASVTAATKGAEALGAQAMAFSKSAFDNQ
HHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
VNAARSLAGAKSVQEVMELQSAFAKTALETYMAEMGKMTETVSASMKESMKPLNERMTAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VEKLQAVR
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA