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The map label for this gene is 197104738

Identifier: 197104738

GI number: 197104738

Start: 1446617

End: 1447417

Strand: Reverse

Name: 197104738

Synonym: PHZ_c1272

Alternate gene names: NA

Gene position: 1447417-1446617 (Counterclockwise)

Preceding gene: 197104739

Following gene: 197104737

Centisome position: 36.22

GC content: 69.29

Gene sequence:

>801_bases
ATGGGGAAAAGCCCGAGAAAAGGAGCCTCCCTCGTGTTCGGCCTATACGATTTCTGGCTGTTCGGCCTGTTCGCCGCTTT
CGCGGCCATCGACCTCGCGGCGCCCGCCCGCGCGTTCCCCGCCGTGCGCGGCTGGCGCGTGAAGGGCGTCCTCGCGGCCG
TGCTCTACTGGTACGTCTCGACCCGCGCCCCCTTCCTGTGGGACGGATTCCTGGGCGAGCACACCCTGTTCGACCTGAAG
GACCTGCCGCTGTGGGCCGCCGCGCCGCTCGCCTTCCTGGCCTATGAGCTCGGCGTCTACGCCTGGCACCGGACCATGCA
CGGCTCGGACGTGCTGTGGCGGCTGTTCCACCAGACCCACCACAGCGCCGAGCGGGTGGACATCTGGGGCGCGCTCTATT
TCCACCCGCTGGACATGGTGGGCTGGGCCTTCGTCGGCAGCTTCACCCTGGTGTTCGTGTTCGGTTTCGCCCCCGAGGCG
GTGCTGATCGCCTTCCTCGCGGCCACCTTCTGCGGGCTGTTCCAGCACGCCAACCTGCGCACGCCGAAATGGCTGGGCTG
GTTCGTCGCCCGGCCCGAGATGCACGCCCTGCACCACGAGCGCGGCGTCCACCGCTTCAACTACGGCGACATTCCGATCT
GGGACATGGTGTTCGGCACCTACCGGAACCCGAAGACCTGGGAAGGCCAGGCCGGATTCTACGACGGCGCCTCGCACCGC
ATCGGCGACCTGCTCATCGGCCGCGACGTGGCCGGCGCGCCCCAGGGCCGCCTCGTCCCTACCGCGGAGGCCGCCCGATG
A

Upstream 100 bases:

>100_bases
ATCCGCACCGGCGCCTTCTGCAGCTACGAACCGGAGACCAACGTCCGCTGGAGCATCGCCTGACAGCGCGCCTCACGATG
TGAGGCGCAGGCTCACGCCT

Downstream 100 bases:

>100_bases
CCCCGATCCTCGCCGACGCCGCTCCGCCGCCGGAAACCCCCGCCCACATCCGTTCATCGAAAGCCGCCATGACCCAGTTC
ACCCACCAGCGCCTGGCGCT

Product: sterol desaturase

Products: NA

Alternate protein names: Sterol Desaturase; Sterol Desaturase-Related Protein; Sterol Desaturase-Like Protein; Sterol Desaturase -Like Protein; Methyltransferase Type

Number of amino acids: Translated: 266; Mature: 265

Protein sequence:

>266_residues
MGKSPRKGASLVFGLYDFWLFGLFAAFAAIDLAAPARAFPAVRGWRVKGVLAAVLYWYVSTRAPFLWDGFLGEHTLFDLK
DLPLWAAAPLAFLAYELGVYAWHRTMHGSDVLWRLFHQTHHSAERVDIWGALYFHPLDMVGWAFVGSFTLVFVFGFAPEA
VLIAFLAATFCGLFQHANLRTPKWLGWFVARPEMHALHHERGVHRFNYGDIPIWDMVFGTYRNPKTWEGQAGFYDGASHR
IGDLLIGRDVAGAPQGRLVPTAEAAR

Sequences:

>Translated_266_residues
MGKSPRKGASLVFGLYDFWLFGLFAAFAAIDLAAPARAFPAVRGWRVKGVLAAVLYWYVSTRAPFLWDGFLGEHTLFDLK
DLPLWAAAPLAFLAYELGVYAWHRTMHGSDVLWRLFHQTHHSAERVDIWGALYFHPLDMVGWAFVGSFTLVFVFGFAPEA
VLIAFLAATFCGLFQHANLRTPKWLGWFVARPEMHALHHERGVHRFNYGDIPIWDMVFGTYRNPKTWEGQAGFYDGASHR
IGDLLIGRDVAGAPQGRLVPTAEAAR
>Mature_265_residues
GKSPRKGASLVFGLYDFWLFGLFAAFAAIDLAAPARAFPAVRGWRVKGVLAAVLYWYVSTRAPFLWDGFLGEHTLFDLKD
LPLWAAAPLAFLAYELGVYAWHRTMHGSDVLWRLFHQTHHSAERVDIWGALYFHPLDMVGWAFVGSFTLVFVFGFAPEAV
LIAFLAATFCGLFQHANLRTPKWLGWFVARPEMHALHHERGVHRFNYGDIPIWDMVFGTYRNPKTWEGQAGFYDGASHRI
GDLLIGRDVAGAPQGRLVPTAEAAR

Specific function: Unknown

COG id: COG3000

COG function: function code I; Sterol desaturase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29954; Mature: 29823

Theoretical pI: Translated: 8.92; Mature: 8.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHCCCCCCCCCCCCCCCCHHCCC
>Mature Secondary Structure 
GKSPRKGASLVFGLYDFWLFGLFAAFAAIDLAAPARAFPAVRGWRVKGVLAAVLYWYVS
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHCCCHHHHHHHHHHHHHHH
TRAPFLWDGFLGEHTLFDLKDLPLWAAAPLAFLAYELGVYAWHRTMHGSDVLWRLFHQTH
CCCCEEECCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC
HSAERVDIWGALYFHPLDMVGWAFVGSFTLVFVFGFAPEAVLIAFLAATFCGLFQHANLR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCC
TPKWLGWFVARPEMHALHHERGVHRFNYGDIPIWDMVFGTYRNPKTWEGQAGFYDGASHR
CCHHHHHEECCCHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCHH
IGDLLIGRDVAGAPQGRLVPTAEAAR
HHHHHCCCCCCCCCCCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA