| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is bioH [C]
Identifier: 197104737
GI number: 197104737
Start: 1445724
End: 1446620
Strand: Reverse
Name: bioH [C]
Synonym: PHZ_c1271
Alternate gene names: 197104737
Gene position: 1446620-1445724 (Counterclockwise)
Preceding gene: 197104738
Following gene: 197104736
Centisome position: 36.2
GC content: 73.02
Gene sequence:
>897_bases ATGACCCCGATCCTCGCCGACGCCGCTCCGCCGCCGGAAACCCCCGCCCACATCCGTTCATCGAAAGCCGCCATGACCCA GTTCACCCACCAGCGCCTGGCGCTGCCCACCGGCGTCGAACTCGACGTCCTGCAGTCCGGCGATCCCCTCGGCCCGCCGA TCCTGCTCCTGCACGGCCTCAGCGACTCCGCGCCCTCCATGCGGCCGCTCATGGAGGCCCTGCCGCCCCACGTCCGCGCC ATCGCCATCACCCAGCGCGGGCACGGCGACAGCGGAAAGCCCGCCGGCCCCTACGCCACCGACGCCTTCGTGGCCGACGC GGCCGCCGCGCTGGACGCCCTCGGCGTGCGCCGGACCGTCGTCTACGGCCACTCGATGGGCAGCCTCGTCGCCCAGCGCT TCGCCATGCGCCATCCCGAGCGGACCGCGGGTCTCGTGCTGGAAGGCGCCTTCCCGTCCCTGTCCGGCAACGCCGCCGTG CAGGCCTGGTACGAGGCCGAGATCGCGCCGATGACCGCGCCGATGAGCCCCGAGGCCGCCCGCGCCTTCCAGGAAAGCAC CCTGGCGAGGCCGGTGCCGCCGGCCTTCCTCGACCTCGTCACGAACGAGACCCAAAAGCTGCCCGTCCATGCCTGGAAGG CGATCCTGCAGGGGATGATGGCCGAGGACTGCTCGGCCGAGCTGCGCCGCCTGCAGGTCCCGGCGCTGATCATCTGGGGC GACCAGGACGCCTTCGTCGGCCGCGGCGACCAGGACGTGCTGAAGACCATCCCGGGCTCCCGCCTCGTGGTCTTCGAGGG CGCCGGCCACAGCCCCCACTGGGAGGACCCCGAGCAGGTGGCCGGCCTGATCGCCATGATGATGCAGGCCCAGCGGGCCG TGGAGGCCGCGCGATGA
Upstream 100 bases:
>100_bases TCTACGACGGCGCCTCGCACCGCATCGGCGACCTGCTCATCGGCCGCGACGTGGCCGGCGCGCCCCAGGGCCGCCTCGTC CCTACCGCGGAGGCCGCCCG
Downstream 100 bases:
>100_bases GTCCCCGCCTGCCCCAGCTCTCGAACGGCCTGTTCCTCACGGACGGCGGCCTGGAGACCACCCTGATCTTCCACGAGGGG CTCGAGCTGCCGCACTTCGC
Product: hydrolase, alpha/beta fold family
Products: NA
Alternate protein names: Atropine acylhydrolase; Atropinesterase [H]
Number of amino acids: Translated: 298; Mature: 297
Protein sequence:
>298_residues MTPILADAAPPPETPAHIRSSKAAMTQFTHQRLALPTGVELDVLQSGDPLGPPILLLHGLSDSAPSMRPLMEALPPHVRA IAITQRGHGDSGKPAGPYATDAFVADAAAALDALGVRRTVVYGHSMGSLVAQRFAMRHPERTAGLVLEGAFPSLSGNAAV QAWYEAEIAPMTAPMSPEAARAFQESTLARPVPPAFLDLVTNETQKLPVHAWKAILQGMMAEDCSAELRRLQVPALIIWG DQDAFVGRGDQDVLKTIPGSRLVVFEGAGHSPHWEDPEQVAGLIAMMMQAQRAVEAAR
Sequences:
>Translated_298_residues MTPILADAAPPPETPAHIRSSKAAMTQFTHQRLALPTGVELDVLQSGDPLGPPILLLHGLSDSAPSMRPLMEALPPHVRA IAITQRGHGDSGKPAGPYATDAFVADAAAALDALGVRRTVVYGHSMGSLVAQRFAMRHPERTAGLVLEGAFPSLSGNAAV QAWYEAEIAPMTAPMSPEAARAFQESTLARPVPPAFLDLVTNETQKLPVHAWKAILQGMMAEDCSAELRRLQVPALIIWG DQDAFVGRGDQDVLKTIPGSRLVVFEGAGHSPHWEDPEQVAGLIAMMMQAQRAVEAAR >Mature_297_residues TPILADAAPPPETPAHIRSSKAAMTQFTHQRLALPTGVELDVLQSGDPLGPPILLLHGLSDSAPSMRPLMEALPPHVRAI AITQRGHGDSGKPAGPYATDAFVADAAAALDALGVRRTVVYGHSMGSLVAQRFAMRHPERTAGLVLEGAFPSLSGNAAVQ AWYEAEIAPMTAPMSPEAARAFQESTLARPVPPAFLDLVTNETQKLPVHAWKAILQGMMAEDCSAELRRLQVPALIIWGD QDAFVGRGDQDVLKTIPGSRLVVFEGAGHSPHWEDPEQVAGLIAMMMQAQRAVEAAR
Specific function: Alkaloid degradation [H]
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the dmpD/todF/xylF esterase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =3.1.1.10 [H]
Molecular weight: Translated: 31709; Mature: 31578
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPILADAAPPPETPAHIRSSKAAMTQFTHQRLALPTGVELDVLQSGDPLGPPILLLHGL CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEEECC SDSAPSMRPLMEALPPHVRAIAITQRGHGDSGKPAGPYATDAFVADAAAALDALGVRRTV CCCCCHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEE VYGHSMGSLVAQRFAMRHPERTAGLVLEGAFPSLSGNAAVQAWYEAEIAPMTAPMSPEAA EECCCHHHHHHHHHHHCCCCHHHCEEEECCCCCCCCCHHEEEEECCCCCCCCCCCCHHHH RAFQESTLARPVPPAFLDLVTNETQKLPVHAWKAILQGMMAEDCSAELRRLQVPALIIWG HHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC DQDAFVGRGDQDVLKTIPGSRLVVFEGAGHSPHWEDPEQVAGLIAMMMQAQRAVEAAR CCCCCCCCCCHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TPILADAAPPPETPAHIRSSKAAMTQFTHQRLALPTGVELDVLQSGDPLGPPILLLHGL CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEEECC SDSAPSMRPLMEALPPHVRAIAITQRGHGDSGKPAGPYATDAFVADAAAALDALGVRRTV CCCCCHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEE VYGHSMGSLVAQRFAMRHPERTAGLVLEGAFPSLSGNAAVQAWYEAEIAPMTAPMSPEAA EECCCHHHHHHHHHHHCCCCHHHCEEEECCCCCCCCCHHEEEEECCCCCCCCCCCCHHHH RAFQESTLARPVPPAFLDLVTNETQKLPVHAWKAILQGMMAEDCSAELRRLQVPALIIWG HHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC DQDAFVGRGDQDVLKTIPGSRLVVFEGAGHSPHWEDPEQVAGLIAMMMQAQRAVEAAR CCCCCCCCCCHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA