| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197104731
Identifier: 197104731
GI number: 197104731
Start: 1441050
End: 1442189
Strand: Direct
Name: 197104731
Synonym: PHZ_c1265
Alternate gene names: NA
Gene position: 1441050-1442189 (Clockwise)
Preceding gene: 197104730
Following gene: 197104732
Centisome position: 36.06
GC content: 74.21
Gene sequence:
>1140_bases GTGGGCTTTCGCGAAGCCCGGCAAGGCGCGGCCGCGGCTGATCCACCGGCTGGACCGCGACACGTCCGGGGTGATCCTGA CCGCCAAGACCAAGCCCGCCGCAGGTTTTCTCGGCAAGGCGCTGATGAAGCGGGCCTTTTCCAAGACCTACCTGGCGATC GTCACGCCGGGCGCGCCCGTGCCGGCGAAGGGCGTCATCGACCGGCCGCTCCGGCGGGTGGAGGAGGGGCGCGAGGCCTA CATGCGGGTCTGCGAGCCCGACCATCCCGACGCCGAAGCCGCCGCCTCCCGCTACCGGACCCTGAAGGAGGGCGAAGGCG CGGCCCTGGTCGAGCTGTCCCCCGAGACCGGTCGGATGCACCAGCTCCGGGTCCATCTGGCCGCCGTCGGCCGCCCGATC GCCGGCGACGCCCGGTACGGCGGCGCCCTGATGGTCGGCGGCCGGCCCGTCCCGCGCCTGATGCTGCACGCCCGGGCGCT CGCCTTCCCCCATCCGGCGGGCGGGACGAAGCGGCTGGAAGCCGAGCCGCCGTCCGACATGGCCGAGCTCATCCAGGCGC TGGGGCTCGGCTGAGCCGGAACGGCGCCGCCCGTTCACCGTTTCGAGCTACAAGCAGCGGAAGCAGAAGGGTTTTCGCTG GAAGGGCCCGACCGATGAAACGCCTGATCGTCCCCGCGCTCCTCGCCATGGCGCTTTCGGCCTGCGCCACGGCGCCGACC GTCTACCAGCCCGCGGCGGGGCCGAGCGCCGTCGGCTATTCGGAATACCGGATCGAACCCGGCCGTTACCGCGTGACCTT CCGCGGCGGGGCCGGGGCCTCGCCCGAGCACGTCACCGACCTGGCCCTGCTGCGCGCGGCCGACCTCGCCCTGGCCGAGG GCTACGACTGGTTCCAGGTCACCGATCGCTTCCTGCAGGGCCAGCCCGACCGCGGCCCGCGGATCGGGCTGGGGGTCGGC GGCGCCGACTTCGGACGCCGCTCCAGCGTGGGCCTGGGGGTCGGCACCAGCTTCAACCTCGGCGGCGGCCCGGCGGTGAC GGCGACGCTGGAGGTCCTGATGGGGCGGGGCGAGCGGCCCCGCGGTCTGAACGTCTACGACGCCCGCGGCCTGCGCCAGA GCCTGGGTCCGCGCGTCTAG
Upstream 100 bases:
>100_bases TGGTCCTCTACGAAGACGCAGACATCCTGGCGCTGAACAAGCCCGCGGGCCTGTCCAGCCAGGGCGGCCGCGGCCAGGTG AACACCCTCGACGAGCTGCT
Downstream 100 bases:
>100_bases GCGCTTCCGCCCGGCGGCCGGGCGTCGCATAAGGGCGCCATGCAAGCTCTCCTGCTCGTCGGAGCCGGCGGCGCGGCCGG GGCCGTGGCGCGTTATCTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 379; Mature: 378
Protein sequence:
>379_residues MGFREARQGAAAADPPAGPRHVRGDPDRQDQARRRFSRQGADEAGLFQDLPGDRHAGRARAGEGRHRPAAPAGGGGARGL HAGLRARPSRRRSRRLPLPDPEGGRRRGPGRAVPRDRSDAPAPGPSGRRRPPDRRRRPVRRRPDGRRPARPAPDAARPGA RLPPSGGRDEAAGSRAAVRHGRAHPGAGARLSRNGAARSPFRATSSGSRRVFAGRARPMKRLIVPALLAMALSACATAPT VYQPAAGPSAVGYSEYRIEPGRYRVTFRGGAGASPEHVTDLALLRAADLALAEGYDWFQVTDRFLQGQPDRGPRIGLGVG GADFGRRSSVGLGVGTSFNLGGGPAVTATLEVLMGRGERPRGLNVYDARGLRQSLGPRV
Sequences:
>Translated_379_residues MGFREARQGAAAADPPAGPRHVRGDPDRQDQARRRFSRQGADEAGLFQDLPGDRHAGRARAGEGRHRPAAPAGGGGARGL HAGLRARPSRRRSRRLPLPDPEGGRRRGPGRAVPRDRSDAPAPGPSGRRRPPDRRRRPVRRRPDGRRPARPAPDAARPGA RLPPSGGRDEAAGSRAAVRHGRAHPGAGARLSRNGAARSPFRATSSGSRRVFAGRARPMKRLIVPALLAMALSACATAPT VYQPAAGPSAVGYSEYRIEPGRYRVTFRGGAGASPEHVTDLALLRAADLALAEGYDWFQVTDRFLQGQPDRGPRIGLGVG GADFGRRSSVGLGVGTSFNLGGGPAVTATLEVLMGRGERPRGLNVYDARGLRQSLGPRV >Mature_378_residues GFREARQGAAAADPPAGPRHVRGDPDRQDQARRRFSRQGADEAGLFQDLPGDRHAGRARAGEGRHRPAAPAGGGGARGLH AGLRARPSRRRSRRLPLPDPEGGRRRGPGRAVPRDRSDAPAPGPSGRRRPPDRRRRPVRRRPDGRRPARPAPDAARPGAR LPPSGGRDEAAGSRAAVRHGRAHPGAGARLSRNGAARSPFRATSSGSRRVFAGRARPMKRLIVPALLAMALSACATAPTV YQPAAGPSAVGYSEYRIEPGRYRVTFRGGAGASPEHVTDLALLRAADLALAEGYDWFQVTDRFLQGQPDRGPRIGLGVGG ADFGRRSSVGLGVGTSFNLGGGPAVTATLEVLMGRGERPRGLNVYDARGLRQSLGPRV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40112; Mature: 39981
Theoretical pI: Translated: 12.40; Mature: 12.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFREARQGAAAADPPAGPRHVRGDPDRQDQARRRFSRQGADEAGLFQDLPGDRHAGRAR CCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCC AGEGRHRPAAPAGGGGARGLHAGLRARPSRRRSRRLPLPDPEGGRRRGPGRAVPRDRSDA CCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC PAPGPSGRRRPPDRRRRPVRRRPDGRRPARPAPDAARPGARLPPSGGRDEAAGSRAAVRH CCCCCCCCCCCCHHHCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCHHHHHC GRAHPGAGARLSRNGAARSPFRATSSGSRRVFAGRARPMKRLIVPALLAMALSACATAPT CCCCCCCCCEECCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCC VYQPAAGPSAVGYSEYRIEPGRYRVTFRGGAGASPEHVTDLALLRAADLALAEGYDWFQV CCCCCCCCCCCCCHHEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHH TDRFLQGQPDRGPRIGLGVGGADFGRRSSVGLGVGTSFNLGGGPAVTATLEVLMGRGERP HHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCC RGLNVYDARGLRQSLGPRV CCCCHHHHHHHHHHHCCCC >Mature Secondary Structure GFREARQGAAAADPPAGPRHVRGDPDRQDQARRRFSRQGADEAGLFQDLPGDRHAGRAR CHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCC AGEGRHRPAAPAGGGGARGLHAGLRARPSRRRSRRLPLPDPEGGRRRGPGRAVPRDRSDA CCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC PAPGPSGRRRPPDRRRRPVRRRPDGRRPARPAPDAARPGARLPPSGGRDEAAGSRAAVRH CCCCCCCCCCCCHHHCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCHHHHHC GRAHPGAGARLSRNGAARSPFRATSSGSRRVFAGRARPMKRLIVPALLAMALSACATAPT CCCCCCCCCEECCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCC VYQPAAGPSAVGYSEYRIEPGRYRVTFRGGAGASPEHVTDLALLRAADLALAEGYDWFQV CCCCCCCCCCCCCHHEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHH TDRFLQGQPDRGPRIGLGVGGADFGRRSSVGLGVGTSFNLGGGPAVTATLEVLMGRGERP HHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCC RGLNVYDARGLRQSLGPRV CCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA