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The map label for this gene is secY [H]

Identifier: 197104716

GI number: 197104716

Start: 1428842

End: 1430194

Strand: Direct

Name: secY [H]

Synonym: PHZ_c1250

Alternate gene names: 197104716

Gene position: 1428842-1430194 (Clockwise)

Preceding gene: 197104715

Following gene: 197104717

Centisome position: 35.75

GC content: 66.89

Gene sequence:

>1353_bases
ATGGCTTCGGCCGCCGAACAGCTCGCCGCGAACATGAACTTCCAGGCCTTCGCCAAGGCCACGGAGCTTCACAAGCGTAT
CTGGTTCACCCTCTGGGCGATGATCGTCTACCGGGCGGGCTGCTACATCCCGATCCCCGGCATCGACGCCGCCGCGCTGC
AGCAGGCCTTCCAGGGCCAGGCGCAGGGCATCCTCGGCATGTTCAACATGTTCTCGGGCGGCGCCGTCGAGCGGATGGCG
CTCTTCGCCCTGAACGTGATGCCGTACATCTCGGCCTCGATCATCGTGCAGCTGCTGGGCACCGTCTATCCGCCGTGGGA
GAAGCTGCGGAAGGAAGGCGGCGAGGCCGGCCGCAAGCAGCTCAACCAGTACACCCGCTATCTCACCGTCGTGCTGGCGC
TGTTCCAGTCGTTCGGCATCGCCATGGGCCTGTCGCAGAGCCCGGGCCTGGTCGAGAATCCGGGGCTGTTCTTCATCGTC
TCGACCGTCGTCACCCTGACCGGCGGCACCATGTTCCTGATGTGGCTGGGCGAGCAGATCACCAGCCGCGGCGTGGGCAA
CGGCATCAGCCTGATCATCTTCGCCGGCATCGTGGCGGTCCTGCCGCGCTATGTGGCGCAGGCGTTCGAGATGGCCCGCA
CCGGCGCCATGAGCGGCGGGGCCCTGTTCCTGATCGCCGCCCTGGTGATCGCGGTGACCGTCGCCATCGTCTTCATGGAG
CGCTCGCAGCGCCGCCTGCTGGTGCAGTATCCCAAGCGCCAGGTGGGCAACCGCATGTTCGGCGGCGACACCTCGTTCCT
GCCGCTGAAGATCAACACCTCGGGCGTGATCCCGCCGATCTTCGCCTCGAGCCTGCTGCTGCTGCCGACGACGGTGATGG
GCTTCGCGGCCACCGCGAACCTGCCGGAGTGGCTCCAGTGGCTGCCGGCCGCGACCGGCCAGCTGCAGCACGGCCAGCCG
CTGTTCATGCTGCTCTACGGCGGCCTGATCGTCTTCTTCTGCTTCTTCTACACCTCGGTCGTCTTCAGCCCCGAGGACAC
GGCGGAGAACCTGCGCAAGTACGGCGGCTTCCTGCCCGGCATCCGTCCCGGGAAGCGTACGGCCGAGTACCTGGACTTCG
TGCTGACCCGCCTGACGGTGATCGGCGCGGCCTACATCACCATCGTCTGCCTGCTGCCCGAGGCCCTGATCGGCTTCTAC
AACGTGCAGTTCTACATGGGCGGCACCAGCCTGCTCATCGTGGTGAGCGTTACCATGGACACCGTGGCCCAGATCCAGTC
GCACCTGCTGGCGCACCAGTACGAGGGGCTGATCAAGCGGTCCAAGCTGCGCGGCGGGGGCCGCGGGCGCTGA

Upstream 100 bases:

>100_bases
CTTCGGCGGAAGCCTGATCCGCATCTGCGACGACGCCGGCCTCGCTATCGGGGCCGGCGCGTCCTATGTGATCCCGGTCA
CGAGTCAGGGGATTTGCTGA

Downstream 100 bases:

>100_bases
TCGGATAGACAGGGAAAGTGACGCCGGCGCCGGCAAGAGCGCCGGCTCGGGGAGGGGTAGTCGATGAACCTGATCCTGTT
CGGACCGCCGGCGGCGGGGA

Product: preprotein translocase subunit SecY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 450; Mature: 449

Protein sequence:

>450_residues
MASAAEQLAANMNFQAFAKATELHKRIWFTLWAMIVYRAGCYIPIPGIDAAALQQAFQGQAQGILGMFNMFSGGAVERMA
LFALNVMPYISASIIVQLLGTVYPPWEKLRKEGGEAGRKQLNQYTRYLTVVLALFQSFGIAMGLSQSPGLVENPGLFFIV
STVVTLTGGTMFLMWLGEQITSRGVGNGISLIIFAGIVAVLPRYVAQAFEMARTGAMSGGALFLIAALVIAVTVAIVFME
RSQRRLLVQYPKRQVGNRMFGGDTSFLPLKINTSGVIPPIFASSLLLLPTTVMGFAATANLPEWLQWLPAATGQLQHGQP
LFMLLYGGLIVFFCFFYTSVVFSPEDTAENLRKYGGFLPGIRPGKRTAEYLDFVLTRLTVIGAAYITIVCLLPEALIGFY
NVQFYMGGTSLLIVVSVTMDTVAQIQSHLLAHQYEGLIKRSKLRGGGRGR

Sequences:

>Translated_450_residues
MASAAEQLAANMNFQAFAKATELHKRIWFTLWAMIVYRAGCYIPIPGIDAAALQQAFQGQAQGILGMFNMFSGGAVERMA
LFALNVMPYISASIIVQLLGTVYPPWEKLRKEGGEAGRKQLNQYTRYLTVVLALFQSFGIAMGLSQSPGLVENPGLFFIV
STVVTLTGGTMFLMWLGEQITSRGVGNGISLIIFAGIVAVLPRYVAQAFEMARTGAMSGGALFLIAALVIAVTVAIVFME
RSQRRLLVQYPKRQVGNRMFGGDTSFLPLKINTSGVIPPIFASSLLLLPTTVMGFAATANLPEWLQWLPAATGQLQHGQP
LFMLLYGGLIVFFCFFYTSVVFSPEDTAENLRKYGGFLPGIRPGKRTAEYLDFVLTRLTVIGAAYITIVCLLPEALIGFY
NVQFYMGGTSLLIVVSVTMDTVAQIQSHLLAHQYEGLIKRSKLRGGGRGR
>Mature_449_residues
ASAAEQLAANMNFQAFAKATELHKRIWFTLWAMIVYRAGCYIPIPGIDAAALQQAFQGQAQGILGMFNMFSGGAVERMAL
FALNVMPYISASIIVQLLGTVYPPWEKLRKEGGEAGRKQLNQYTRYLTVVLALFQSFGIAMGLSQSPGLVENPGLFFIVS
TVVTLTGGTMFLMWLGEQITSRGVGNGISLIIFAGIVAVLPRYVAQAFEMARTGAMSGGALFLIAALVIAVTVAIVFMER
SQRRLLVQYPKRQVGNRMFGGDTSFLPLKINTSGVIPPIFASSLLLLPTTVMGFAATANLPEWLQWLPAATGQLQHGQPL
FMLLYGGLIVFFCFFYTSVVFSPEDTAENLRKYGGFLPGIRPGKRTAEYLDFVLTRLTVIGAAYITIVCLLPEALIGFYN
VQFYMGGTSLLIVVSVTMDTVAQIQSHLLAHQYEGLIKRSKLRGGGRGR

Specific function: Involved in protein export. Interacts with secA and secE to allow the translocation of proteins across the plasma membrane, by forming part of a channel [H]

COG id: COG0201

COG function: function code U; Preprotein translocase subunit SecY

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secY/SEC61-alpha family [H]

Homologues:

Organism=Escherichia coli, GI1789696, Length=430, Percent_Identity=54.8837209302326, Blast_Score=423, Evalue=1e-119,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002208
- InterPro:   IPR023201 [H]

Pfam domain/function: PF00344 SecY [H]

EC number: NA

Molecular weight: Translated: 49083; Mature: 48951

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: PS00756 SECY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
ASAAEQLAANMNFQAFAKATELHKRIWFTLWAMIVYRAGCYIPIPGIDAAALQQAFQGQ
CCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHH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HHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA