| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197104688
Identifier: 197104688
GI number: 197104688
Start: 1411573
End: 1412676
Strand: Direct
Name: 197104688
Synonym: PHZ_c1222
Alternate gene names: NA
Gene position: 1411573-1412676 (Clockwise)
Preceding gene: 197104687
Following gene: 197104690
Centisome position: 35.32
GC content: 66.58
Gene sequence:
>1104_bases ATGCTGCAGGTTCAAGTCGTCAAGGGTCCGCCGACCGAGGTCCAGTACTTCGACGAGGACGATCTGGCCCACCGCCTCAC CGACCACGACGTCGAGGTGATCCGCGAGATCTTCAGGACGCCGCTGACCGGGTCCTACAACTGGGACTACGAGGCCGCGA ACGCGCGGATCCGCCGGCTGTACGAGCTGGGCAAGCGCTTCAACTGGAACTCCGAGCTGGACGTCGACTGGGGCCTGCAG ATGCCGGCGCCCGAGGGCGCGCCGCCCGAGCCCGAGGGTTTCGCCGACCATCCGAAGTGGAAGGCTCTGAGCCCCGAGCA GAAGGCGGACTTCATGCGCCGCACGACGGCCCAGACGCTGTCGCAGTTCCTGCACGGGGAGCAGGGGGCGCTGATGGTGG CCTCGCAGCTCGTCAGCTGCGCCCCCACCCACGACGCCAAGCTCTACGCCGCCTCCCAGACCTTCGACGAGGCGCGCCAC GTGGAGGTGTTCCACCGCTACCTGATGGAGCGGTGCCACATGATCTATCCGATCAACCCGAACCTGAAGTTCCTGCTGGA CAAGGTGCTGACCGACGAGCGCTGGGACCTGAAGTTCATCGGGATGCAGATCCTGATCGAGGGCCTGGCTCTGGCCGCCT TCCAGACCATCCACGAGACGACGCCCGATCCGCTGCTGAAGCAGGTCGTCGGCCTCGTGATGCGGGACGAGGGGCGGCAC GTGGCCTTCGGCGTGAACTACCTCGAGGACTGGATCCGCGCCCTGCCGCAGGCCGAGATCGAGGAGCGGGCGCAGTTCGC CTACGAGGCCTGCGTGGTGATGAAGAACCGGCTGATCTCGACCAACGTGGCCGAGGAGTTCGGCTTCACCCGCGAGGAGG CCCTGGAGATCAACGCCAAGACCCAGGGCGGACAGGCGTTCCGCAAGTTCCTGTTCGAGCGGATGATCCCGAACCTGAAG CGCGTGGGTCTGCTCACCGAGGCCATCCGGCCGAAGTTCGAGGAGCTGGGCGTGCTCGAGTTCGAGAACCTGCAGCACGA CGGCCTGATCGACTGGGCCGTGCTGGAGGCGCCGCTGGAGATGAAGGACCGCGTGGCGGCCTGA
Upstream 100 bases:
>100_bases CGCTCCCGAAGTTGATCTGGATCAAAGATGACGCCGGCGTCATTTTTATAGTCGGCTCCCGATAGGCCCGGCAGAGGCCG CGCCAAGAGGGAGTCGCCCA
Downstream 100 bases:
>100_bases TCAGTCCCGGGGCGTAGTCAGTTCCTGGACCGGCCCGCGGCGCCGCTGGCGTCGTGGGCCGAGCCGCCCATGCCCTTCAT GTGCGAGGCCCCGGCGGGCG
Product: ribonucleoside-diphosphate reductase beta chain
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 367; Mature: 367
Protein sequence:
>367_residues MLQVQVVKGPPTEVQYFDEDDLAHRLTDHDVEVIREIFRTPLTGSYNWDYEAANARIRRLYELGKRFNWNSELDVDWGLQ MPAPEGAPPEPEGFADHPKWKALSPEQKADFMRRTTAQTLSQFLHGEQGALMVASQLVSCAPTHDAKLYAASQTFDEARH VEVFHRYLMERCHMIYPINPNLKFLLDKVLTDERWDLKFIGMQILIEGLALAAFQTIHETTPDPLLKQVVGLVMRDEGRH VAFGVNYLEDWIRALPQAEIEERAQFAYEACVVMKNRLISTNVAEEFGFTREEALEINAKTQGGQAFRKFLFERMIPNLK RVGLLTEAIRPKFEELGVLEFENLQHDGLIDWAVLEAPLEMKDRVAA
Sequences:
>Translated_367_residues MLQVQVVKGPPTEVQYFDEDDLAHRLTDHDVEVIREIFRTPLTGSYNWDYEAANARIRRLYELGKRFNWNSELDVDWGLQ MPAPEGAPPEPEGFADHPKWKALSPEQKADFMRRTTAQTLSQFLHGEQGALMVASQLVSCAPTHDAKLYAASQTFDEARH VEVFHRYLMERCHMIYPINPNLKFLLDKVLTDERWDLKFIGMQILIEGLALAAFQTIHETTPDPLLKQVVGLVMRDEGRH VAFGVNYLEDWIRALPQAEIEERAQFAYEACVVMKNRLISTNVAEEFGFTREEALEINAKTQGGQAFRKFLFERMIPNLK RVGLLTEAIRPKFEELGVLEFENLQHDGLIDWAVLEAPLEMKDRVAA >Mature_367_residues MLQVQVVKGPPTEVQYFDEDDLAHRLTDHDVEVIREIFRTPLTGSYNWDYEAANARIRRLYELGKRFNWNSELDVDWGLQ MPAPEGAPPEPEGFADHPKWKALSPEQKADFMRRTTAQTLSQFLHGEQGALMVASQLVSCAPTHDAKLYAASQTFDEARH VEVFHRYLMERCHMIYPINPNLKFLLDKVLTDERWDLKFIGMQILIEGLALAAFQTIHETTPDPLLKQVVGLVMRDEGRH VAFGVNYLEDWIRALPQAEIEERAQFAYEACVVMKNRLISTNVAEEFGFTREEALEINAKTQGGQAFRKFLFERMIPNLK RVGLLTEAIRPKFEELGVLEFENLQHDGLIDWAVLEAPLEMKDRVAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42213; Mature: 42213
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQVQVVKGPPTEVQYFDEDDLAHRLTDHDVEVIREIFRTPLTGSYNWDYEAANARIRRL CEEEEEECCCCCCCEECCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH YELGKRFNWNSELDVDWGLQMPAPEGAPPEPEGFADHPKWKALSPEQKADFMRRTTAQTL HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH SQFLHGEQGALMVASQLVSCAPTHDAKLYAASQTFDEARHVEVFHRYLMERCHMIYPINP HHHHCCCCCHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCEEEECCC NLKFLLDKVLTDERWDLKFIGMQILIEGLALAAFQTIHETTPDPLLKQVVGLVMRDEGRH CHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCE VAFGVNYLEDWIRALPQAEIEERAQFAYEACVVMKNRLISTNVAEEFGFTREEALEINAK EEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHEEECCC TQGGQAFRKFLFERMIPNLKRVGLLTEAIRPKFEELGVLEFENLQHDGLIDWAVLEAPLE CCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHCCCEEECCCCCCCCEEHHHHHCCHH MKDRVAA HHHHCCC >Mature Secondary Structure MLQVQVVKGPPTEVQYFDEDDLAHRLTDHDVEVIREIFRTPLTGSYNWDYEAANARIRRL CEEEEEECCCCCCCEECCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH YELGKRFNWNSELDVDWGLQMPAPEGAPPEPEGFADHPKWKALSPEQKADFMRRTTAQTL HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH SQFLHGEQGALMVASQLVSCAPTHDAKLYAASQTFDEARHVEVFHRYLMERCHMIYPINP HHHHCCCCCHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCEEEECCC NLKFLLDKVLTDERWDLKFIGMQILIEGLALAAFQTIHETTPDPLLKQVVGLVMRDEGRH CHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCE VAFGVNYLEDWIRALPQAEIEERAQFAYEACVVMKNRLISTNVAEEFGFTREEALEINAK EEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHEEECCC TQGGQAFRKFLFERMIPNLKRVGLLTEAIRPKFEELGVLEFENLQHDGLIDWAVLEAPLE CCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHCCCEEECCCCCCCCEEHHHHHCCHH MKDRVAA HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA