Click here to switch to the map view.

The map label for this gene is yuxL [H]

Identifier: 197104686

GI number: 197104686

Start: 1409058

End: 1411022

Strand: Direct

Name: yuxL [H]

Synonym: PHZ_c1220

Alternate gene names: 197104686

Gene position: 1409058-1411022 (Clockwise)

Preceding gene: 197104685

Following gene: 197104687

Centisome position: 35.26

GC content: 73.94

Gene sequence:

>1965_bases
ATGCGTAGGGTTCTGGCGGCCTCGGCGGCCGCGGTCGTGCTGGCGGCTGCCGGGCAGGGGGCCGCCGCGCCGCCGCCCGC
TTCGGCGTTCGGCCGGATACCGGCCGTGGTGCAGGCGGCGATCTCGCCCGACGGCGCGCGGGTCGCCGTCCTCGGCGGGC
ACAACGACGAGCGGGTGCTTTCCATCGCGACGCTGGACCAGCCGAACCTGCCGCAGCTGCGGCTGGGCGAGGTCGAGGCC
GTCGGCGTGCGCTGGGCCGGCGACGACTACGTGCTGGCCCGCCTGGCCTACTGGGAGCAGGTCGGCGCCCGCGTCGCCTA
CCGTTTCGAGCGGACGGTGGCGGTGACGCCGGAGGGCAAGGCGGTGTCGCGCCTGCTCGACAGCGGCGCGAACAACCTTC
TCCTCTCGCAGCCGATCCTCGGCGTGACCACGGAAGGCGGCAAGCCGCGGGTGCTGATGACCGGCCTGATGGAGTCGGGG
GGCGCGAGCTCGGGGGCCAACACCCGCCTGGCCCGCAAGGGCGTGGAGAGCGACTTCGTCCTGGCGCTGTGGAGCGTGGA
TCCGGCCACCGGCCGGGGCTCGATCGTCGAGCGGGGGACCTACGACACCACGTCCTGGGAGGTGGATCCCTCGGGCGCCG
CGCGGGTCCGCCTGGACATCGACGAGCTCACCCACGCCTTCTCGATCCGCGGCCGGGCGCAGGGCCGCTCGCAGTACAGC
CAGGTCTGGAAGGGCGAGGACTTCGCCAGCCGCCGCGCCTACTACGGCTATTCGGCGCCGGACGACGCCCTGATCATGGC
CGAGGGCGGCCGGCTGGTGAAGCGGCGGCTCTCGGACGGAGCGGTCGAGCCGTTCGGCCCCGACGTCCTGCCGAACAATC
CCGAGCTGATCTGGGACGAGCACCGCGGGGCTGTGGTGGGCGTCACCGCCGGGGCCGAGAAGCCGGTGGTCGCCTGGACC
GATCCCCAGGTCGGCGCCGCGCACGCCACCCTCGCCAAGGTGTTCAAGGACAGGCGCGTGGACCTCAGGAGTTGGTCGAA
GGACCGGACGCGGTTCGTCGCCCGGGTCAGCGGCCCCGGCGCGCCGGGCGTGTGGTACCTGTTCGACACCGCGCGCAAGG
AGGTTTCGCCGCTCGGCGACGAGTACCCGGAGCTGGCCGGCGCGCAGCTCGGAGCCACCCGCTGGATCACCTACAAGGCC
CGCGACGGCCTCGAGATCCCGGCCTACCTGACCCTTCCGCCCGCCGCCGCGACGGCCGGACGCAAGCCGCCGCTGGTGGT
GCTGCCGCACGGCGGGCCGCGGGCCCGCGACGAGTACGAGTTCGAATACCTCGTCCAGTTCCTGGCGAGCCGCGGCTATG
CGGTCCTGCAGCCGCAGTTCCGCGGCTCGTGGGGCTTCGGCGACGCCTTCGAGGAGGCCGGCGAGGGCGAGTGGGGCGGC
AAGATGCAGACCGACCTGCTGGACGGCGTCGCCGCCCTGGCCGCCCAGGGCGAAGTGGACGCGGCCCGCGCCTGCATCGT
CGGCGCGTCCTTCGGCGGCTACTCCGCGCTGGCCGGGGCCGCCCTCTATCCGGGCGCCTACCGCTGCGCCGCCTCCATCG
CCGGCATCGCCGATCTGGGCCAGCTCCTGCTCGAGCAGGGCCGCGCCTACGGCCGCGCCTCGGCGGGACTGGAGGAGCTG
CGGGTCATGATCGGCGCGGCGAGCCCGCAGAAGCTGGCGGACACCTCGCCGGCGCAGCATGCGGCGGCGGTCCAGGCGCC
GGTCCTGCTGATCCACGGCGACAAGGACACCGTGGTGGCGCCGGCCCAGTCGCTGCGCATGGCCGAGGCCCTGAAGGCCG
CCGGAAAGCCGCACGAGCTGGTGATCCTGGAAGGCGAGAACCACTACCTGACCCGCTCGTCGAACCGCACCCGCACGCTC
GAGGCGCTGGAGGCGTTCCTGGCCAGGCATCTGCCGGTGTCGTGA

Upstream 100 bases:

>100_bases
GAGCGATCCCGGGCCGTTTTCGTGCTCGCGCCCTGAGGTTGCGCTCGTCGCCGGTTCAACTAGCTTGGCCGTGGGCGGTT
CAGTCTTCGGGGGAGTTCAC

Downstream 100 bases:

>100_bases
AGGCCGGATCGTGAGGGCGGGGGGTTGGCTTGGCCGCAGGCGTCCCTAGATCAGGAGGCCACACAAGGAGGACGCCTGTG
CCGCTGCTGCTTTGCCCCAA

Product: prolyl oligopeptidase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 654; Mature: 654

Protein sequence:

>654_residues
MRRVLAASAAAVVLAAAGQGAAAPPPASAFGRIPAVVQAAISPDGARVAVLGGHNDERVLSIATLDQPNLPQLRLGEVEA
VGVRWAGDDYVLARLAYWEQVGARVAYRFERTVAVTPEGKAVSRLLDSGANNLLLSQPILGVTTEGGKPRVLMTGLMESG
GASSGANTRLARKGVESDFVLALWSVDPATGRGSIVERGTYDTTSWEVDPSGAARVRLDIDELTHAFSIRGRAQGRSQYS
QVWKGEDFASRRAYYGYSAPDDALIMAEGGRLVKRRLSDGAVEPFGPDVLPNNPELIWDEHRGAVVGVTAGAEKPVVAWT
DPQVGAAHATLAKVFKDRRVDLRSWSKDRTRFVARVSGPGAPGVWYLFDTARKEVSPLGDEYPELAGAQLGATRWITYKA
RDGLEIPAYLTLPPAAATAGRKPPLVVLPHGGPRARDEYEFEYLVQFLASRGYAVLQPQFRGSWGFGDAFEEAGEGEWGG
KMQTDLLDGVAALAAQGEVDAARACIVGASFGGYSALAGAALYPGAYRCAASIAGIADLGQLLLEQGRAYGRASAGLEEL
RVMIGAASPQKLADTSPAQHAAAVQAPVLLIHGDKDTVVAPAQSLRMAEALKAAGKPHELVILEGENHYLTRSSNRTRTL
EALEAFLARHLPVS

Sequences:

>Translated_654_residues
MRRVLAASAAAVVLAAAGQGAAAPPPASAFGRIPAVVQAAISPDGARVAVLGGHNDERVLSIATLDQPNLPQLRLGEVEA
VGVRWAGDDYVLARLAYWEQVGARVAYRFERTVAVTPEGKAVSRLLDSGANNLLLSQPILGVTTEGGKPRVLMTGLMESG
GASSGANTRLARKGVESDFVLALWSVDPATGRGSIVERGTYDTTSWEVDPSGAARVRLDIDELTHAFSIRGRAQGRSQYS
QVWKGEDFASRRAYYGYSAPDDALIMAEGGRLVKRRLSDGAVEPFGPDVLPNNPELIWDEHRGAVVGVTAGAEKPVVAWT
DPQVGAAHATLAKVFKDRRVDLRSWSKDRTRFVARVSGPGAPGVWYLFDTARKEVSPLGDEYPELAGAQLGATRWITYKA
RDGLEIPAYLTLPPAAATAGRKPPLVVLPHGGPRARDEYEFEYLVQFLASRGYAVLQPQFRGSWGFGDAFEEAGEGEWGG
KMQTDLLDGVAALAAQGEVDAARACIVGASFGGYSALAGAALYPGAYRCAASIAGIADLGQLLLEQGRAYGRASAGLEEL
RVMIGAASPQKLADTSPAQHAAAVQAPVLLIHGDKDTVVAPAQSLRMAEALKAAGKPHELVILEGENHYLTRSSNRTRTL
EALEAFLARHLPVS
>Mature_654_residues
MRRVLAASAAAVVLAAAGQGAAAPPPASAFGRIPAVVQAAISPDGARVAVLGGHNDERVLSIATLDQPNLPQLRLGEVEA
VGVRWAGDDYVLARLAYWEQVGARVAYRFERTVAVTPEGKAVSRLLDSGANNLLLSQPILGVTTEGGKPRVLMTGLMESG
GASSGANTRLARKGVESDFVLALWSVDPATGRGSIVERGTYDTTSWEVDPSGAARVRLDIDELTHAFSIRGRAQGRSQYS
QVWKGEDFASRRAYYGYSAPDDALIMAEGGRLVKRRLSDGAVEPFGPDVLPNNPELIWDEHRGAVVGVTAGAEKPVVAWT
DPQVGAAHATLAKVFKDRRVDLRSWSKDRTRFVARVSGPGAPGVWYLFDTARKEVSPLGDEYPELAGAQLGATRWITYKA
RDGLEIPAYLTLPPAAATAGRKPPLVVLPHGGPRARDEYEFEYLVQFLASRGYAVLQPQFRGSWGFGDAFEEAGEGEWGG
KMQTDLLDGVAALAAQGEVDAARACIVGASFGGYSALAGAALYPGAYRCAASIAGIADLGQLLLEQGRAYGRASAGLEEL
RVMIGAASPQKLADTSPAQHAAAVQAPVLLIHGDKDTVVAPAQSLRMAEALKAAGKPHELVILEGENHYLTRSSNRTRTL
EALEAFLARHLPVS

Specific function: Unknown

COG id: COG1506

COG function: function code E; Dipeptidyl aminopeptidases/acylaminoacyl-peptidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S9B family [H]

Homologues:

Organism=Homo sapiens, GI23510451, Length=259, Percent_Identity=27.027027027027, Blast_Score=82, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI25144537, Length=398, Percent_Identity=29.1457286432161, Blast_Score=154, Evalue=2e-37,
Organism=Caenorhabditis elegans, GI25144540, Length=398, Percent_Identity=29.1457286432161, Blast_Score=153, Evalue=2e-37,
Organism=Caenorhabditis elegans, GI25144543, Length=310, Percent_Identity=30.3225806451613, Blast_Score=133, Evalue=2e-31,
Organism=Caenorhabditis elegans, GI17552908, Length=267, Percent_Identity=31.8352059925094, Blast_Score=123, Evalue=3e-28,
Organism=Caenorhabditis elegans, GI25149159, Length=242, Percent_Identity=29.7520661157025, Blast_Score=86, Evalue=5e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR011659
- InterPro:   IPR001375 [H]

Pfam domain/function: PF07676 PD40; PF00326 Peptidase_S9 [H]

EC number: NA

Molecular weight: Translated: 69293; Mature: 69293

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRVLAASAAAVVLAAAGQGAAAPPPASAFGRIPAVVQAAISPDGARVAVLGGHNDERVL
CCCHHHHHHHEEEEEECCCCCCCCCCHHHHCCCHHHHHHHCCCCCCEEEEEECCCCCEEE
SIATLDQPNLPQLRLGEVEAVGVRWAGDDYVLARLAYWEQVGARVAYRFERTVAVTPEGK
EEEECCCCCCCCEECCCEEEEEEEECCCHHHHHHHHHHHHHHHHEEEEEEEEEEECCCCH
AVSRLLDSGANNLLLSQPILGVTTEGGKPRVLMTGLMESGGASSGANTRLARKGVESDFV
HHHHHHHCCCCCEEEECCCEEEECCCCCCEEEEEECHHCCCCCCCCCCHHHHCCCCCCEE
LALWSVDPATGRGSIVERGTYDTTSWEVDPSGAARVRLDIDELTHAFSIRGRAQGRSQYS
EEEEECCCCCCCCCEEECCCCCCCCEEECCCCCEEEEEEHHHHHHHHHCCCCCCCHHHHH
QVWKGEDFASRRAYYGYSAPDDALIMAEGGRLVKRRLSDGAVEPFGPDVLPNNPELIWDE
HHHCCCCHHHCCEECCCCCCCCEEEEECCCHHHHHHHCCCCCCCCCCCCCCCCCCEEEEC
HRGAVVGVTAGAEKPVVAWTDPQVGAAHATLAKVFKDRRVDLRSWSKDRTRFVARVSGPG
CCCEEEEEECCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCHHHCCCCCEEEEEEECCCC
APGVWYLFDTARKEVSPLGDEYPELAGAQLGATRWITYKARDGLEIPAYLTLPPAAATAG
CCCEEEEEHHHHHHHCCCCCCCHHHCCCCCCCEEEEEEECCCCCCCCEEEEECCHHHCCC
RKPPLVVLPHGGPRARDEYEFEYLVQFLASRGYAVLQPQFRGSWGFGDAFEEAGEGEWGG
CCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCHHHHHCCCCCCCC
KMQTDLLDGVAALAAQGEVDAARACIVGASFGGYSALAGAALYPGAYRCAASIAGIADLG
CHHHHHHHHHHHHHCCCCCCHHCEEEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHH
QLLLEQGRAYGRASAGLEELRVMIGAASPQKLADTSPAQHAAAVQAPVLLIHGDKDTVVA
HHHHHHCCCCCCHHCCHHHHHHHHCCCCCHHHCCCCCHHHHHHHCCCEEEEECCCCCEEC
PAQSLRMAEALKAAGKPHELVILEGENHYLTRSSNRTRTLEALEAFLARHLPVS
CHHHHHHHHHHHHCCCCCEEEEEECCCEEEECCCCCHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRRVLAASAAAVVLAAAGQGAAAPPPASAFGRIPAVVQAAISPDGARVAVLGGHNDERVL
CCCHHHHHHHEEEEEECCCCCCCCCCHHHHCCCHHHHHHHCCCCCCEEEEEECCCCCEEE
SIATLDQPNLPQLRLGEVEAVGVRWAGDDYVLARLAYWEQVGARVAYRFERTVAVTPEGK
EEEECCCCCCCCEECCCEEEEEEEECCCHHHHHHHHHHHHHHHHEEEEEEEEEEECCCCH
AVSRLLDSGANNLLLSQPILGVTTEGGKPRVLMTGLMESGGASSGANTRLARKGVESDFV
HHHHHHHCCCCCEEEECCCEEEECCCCCCEEEEEECHHCCCCCCCCCCHHHHCCCCCCEE
LALWSVDPATGRGSIVERGTYDTTSWEVDPSGAARVRLDIDELTHAFSIRGRAQGRSQYS
EEEEECCCCCCCCCEEECCCCCCCCEEECCCCCEEEEEEHHHHHHHHHCCCCCCCHHHHH
QVWKGEDFASRRAYYGYSAPDDALIMAEGGRLVKRRLSDGAVEPFGPDVLPNNPELIWDE
HHHCCCCHHHCCEECCCCCCCCEEEEECCCHHHHHHHCCCCCCCCCCCCCCCCCCEEEEC
HRGAVVGVTAGAEKPVVAWTDPQVGAAHATLAKVFKDRRVDLRSWSKDRTRFVARVSGPG
CCCEEEEEECCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCHHHCCCCCEEEEEEECCCC
APGVWYLFDTARKEVSPLGDEYPELAGAQLGATRWITYKARDGLEIPAYLTLPPAAATAG
CCCEEEEEHHHHHHHCCCCCCCHHHCCCCCCCEEEEEEECCCCCCCCEEEEECCHHHCCC
RKPPLVVLPHGGPRARDEYEFEYLVQFLASRGYAVLQPQFRGSWGFGDAFEEAGEGEWGG
CCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCHHHHHCCCCCCCC
KMQTDLLDGVAALAAQGEVDAARACIVGASFGGYSALAGAALYPGAYRCAASIAGIADLG
CHHHHHHHHHHHHHCCCCCCHHCEEEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHH
QLLLEQGRAYGRASAGLEELRVMIGAASPQKLADTSPAQHAAAVQAPVLLIHGDKDTVVA
HHHHHHCCCCCCHHCCHHHHHHHHCCCCCHHHCCCCCHHHHHHHCCCEEEEECCCCCEEC
PAQSLRMAEALKAAGKPHELVILEGENHYLTRSSNRTRTLEALEAFLARHLPVS
CHHHHHHHHHHHHCCCCCEEEEEECCCEEEECCCCCHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377; 3098560 [H]