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The map label for this gene is nusG [H]

Identifier: 197104678

GI number: 197104678

Start: 1396458

End: 1397027

Strand: Direct

Name: nusG [H]

Synonym: PHZ_c1212

Alternate gene names: 197104678

Gene position: 1396458-1397027 (Clockwise)

Preceding gene: 197104677

Following gene: 197104679

Centisome position: 34.94

GC content: 65.44

Gene sequence:

>570_bases
ATGTCCGAAGCTGCCGTTTCCCCGCCCAAGGGCAATCCCCGCCACAAGTGGTACATCGTCCACGCCTACTCGAACTTCGA
GAAGAAGGTGGCCGAGAGCATCCGCGAACAGGCGCGCACCCAGGGCCTCGAGGAGAACTTCTCCGAGATCCTCGTGCCGA
CCGAGGACGTGGTGGAGATCCGCCGCGGCCGGAAGGTCAACTCCGAGCGCAAGTTCTTCCCCGGCTACGTGCTGGTGAAG
ATGGAGATGACCGACGAGGCCTACCACCTCATCAAGAACACCCCGAAGGTCACGGGCTTCCTGGGCTCGGGCTCCAAGCC
GATCCCGGTCTCCGAGAAGGAGGTCGAGCGGATCGTCGGGGCGATCGAGGAAGGCGTCGAGCGCCCGAAGCCGACCATCA
CCTTCGAGATCGGCGAGCAGGTCCGCGTCACGGACGGCCCCTTCGCCAGCTTCAACGGCTCGGTGGAGCAGGTCGACGAG
GAGCGCGCCCGCCTGCGGGTCACCGTCTCCATCTTCGGCCGCGCCACCCCGGTCGAGCTCGAATACGGCCAGGTCGAAAA
GATCGCGTAA

Upstream 100 bases:

>100_bases
ATGGTCCTGCTGGCCGCCGTCTTCTTCTGGGTCGTGGACCTCGGCCTGAGCTTCGGCGTCGGCCAGGTCCTGCGGCTGGC
GAACGCCGGGTGATTTGAAG

Downstream 100 bases:

>100_bases
GCTGGAGGCGCGTCACGTGCGACGCGCCGCCGGCTGAGACGATCTTTTGAACCACCAAGACCACCAAGATCACCAAGCGG
TCGGCGCGAGCGTCGACCGC

Product: transcription antitermination protein NusG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 188

Protein sequence:

>189_residues
MSEAAVSPPKGNPRHKWYIVHAYSNFEKKVAESIREQARTQGLEENFSEILVPTEDVVEIRRGRKVNSERKFFPGYVLVK
MEMTDEAYHLIKNTPKVTGFLGSGSKPIPVSEKEVERIVGAIEEGVERPKPTITFEIGEQVRVTDGPFASFNGSVEQVDE
ERARLRVTVSIFGRATPVELEYGQVEKIA

Sequences:

>Translated_189_residues
MSEAAVSPPKGNPRHKWYIVHAYSNFEKKVAESIREQARTQGLEENFSEILVPTEDVVEIRRGRKVNSERKFFPGYVLVK
MEMTDEAYHLIKNTPKVTGFLGSGSKPIPVSEKEVERIVGAIEEGVERPKPTITFEIGEQVRVTDGPFASFNGSVEQVDE
ERARLRVTVSIFGRATPVELEYGQVEKIA
>Mature_188_residues
SEAAVSPPKGNPRHKWYIVHAYSNFEKKVAESIREQARTQGLEENFSEILVPTEDVVEIRRGRKVNSERKFFPGYVLVKM
EMTDEAYHLIKNTPKVTGFLGSGSKPIPVSEKEVERIVGAIEEGVERPKPTITFEIGEQVRVTDGPFASFNGSVEQVDEE
RARLRVTVSIFGRATPVELEYGQVEKIA

Specific function: Influences transcription termination and antitermination. Acts as a component of the transcription complex, and interacts with the termination factor rho and RNA polymerase [H]

COG id: COG0250

COG function: function code K; Transcription antiterminator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KOW domain [H]

Homologues:

Organism=Escherichia coli, GI1790414, Length=176, Percent_Identity=55.1136363636364, Blast_Score=211, Evalue=2e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005824
- InterPro:   IPR001062
- InterPro:   IPR015869
- InterPro:   IPR006645
- InterPro:   IPR014722
- InterPro:   IPR008991 [H]

Pfam domain/function: PF00467 KOW; PF02357 NusG [H]

EC number: NA

Molecular weight: Translated: 21278; Mature: 21147

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: PS01014 NUSG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEAAVSPPKGNPRHKWYIVHAYSNFEKKVAESIREQARTQGLEENFSEILVPTEDVVEI
CCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHH
RRGRKVNSERKFFPGYVLVKMEMTDEAYHLIKNTPKVTGFLGSGSKPIPVSEKEVERIVG
HHCCCCCCCCCCCCCEEEEEEECCHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHH
AIEEGVERPKPTITFEIGEQVRVTDGPFASFNGSVEQVDEERARLRVTVSIFGRATPVEL
HHHHHHCCCCCEEEEEECCEEEECCCCCCCCCCCHHHHHHHHHEEEEEEEECCCCCCEEE
EYGQVEKIA
CCCCCCCCC
>Mature Secondary Structure 
SEAAVSPPKGNPRHKWYIVHAYSNFEKKVAESIREQARTQGLEENFSEILVPTEDVVEI
CCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHH
RRGRKVNSERKFFPGYVLVKMEMTDEAYHLIKNTPKVTGFLGSGSKPIPVSEKEVERIVG
HHCCCCCCCCCCCCCEEEEEEECCHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHH
AIEEGVERPKPTITFEIGEQVRVTDGPFASFNGSVEQVDEERARLRVTVSIFGRATPVEL
HHHHHHCCCCCEEEEEECCEEEECCCCCCCCCCCHHHHHHHHHEEEEEEEECCCCCCEEE
EYGQVEKIA
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]