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The map label for this gene is ytfE [C]

Identifier: 197104662

GI number: 197104662

Start: 1378235

End: 1378888

Strand: Direct

Name: ytfE [C]

Synonym: PHZ_c1196

Alternate gene names: 197104662

Gene position: 1378235-1378888 (Clockwise)

Preceding gene: 197104661

Following gene: 197104663

Centisome position: 34.49

GC content: 70.64

Gene sequence:

>654_bases
ATGACCCTCGAAACCACCCTCGTGCGCGACATCGCCGTCACCCGCCCCGGGGCGACGGCCGTGCTCCGCCGGCACAGGAT
CGACTTCTGCTGCAACGGCGGCCTGTCGCTGGCCGAGGCGGCCGCCCGCCGGGACGTCGACCTGGGCGCGGTCGCGCGCG
AGCTGGAGGCGCTCACGCCCGAGCCGCGGACGACGCCCGAGCAGCCGGAGGCGCTGATCGAGCATATCCTCAAGCGCTTC
CACGAGGTCCATCGCCGCGAATTCCCCGAAGCCATCCGCATGGCCCGGCGGGTCGAGGCCGTGCACCGGGCCAACACGGA
CTGCCCGCACGGCCTGGCGGATCATCTGGCGCAGATGTCCGAGGACCTGGAGAGCCACCAGCAGAAGGAGGAGCGGATGC
TCTTCCCGATGATGCTGGCGGGCGGACGCGGCATGACGGGCCTGCCGATCCGGCGGATGCTGGTCGAGCACGAGGAGGTC
GGCGCGCAGCTGGAGCGGCTTGCGGAGCTGACCGGCGAGTTCGAGCCGCCACAGGGCGCCTGCACGACCTGGCGCGCGCT
CTATCAGGCCTGCCGCAAGCTCGACGAGGATTTGCGGGAACACATGCACCTGGAGAACAACGTGCTGTTTCCGCAGTTCG
CCCGAGCGCTCTGA

Upstream 100 bases:

>100_bases
CGAGGGCGCCCTCCGGGCCGGGCCGATCCGCGGCGGGTTTGTCCGGGCGCAAAGTACGCGCCCGGCCGAGCGGGCAGGCT
CTTCAACGAAGGAGACGAGC

Downstream 100 bases:

>100_bases
TCCGGAGCGGCGTTCTGACTCGCGCCAGACACGCCCCCGGGTGCGGCCGCCCTGCGGCCCCCCATGGGTCCTCCCGCCCG
GCGGGCCCTCGGCCCGGTGC

Product: regulator of cell morphogenesis and NO signaling

Products: NA

Alternate protein names: RCMNS [H]

Number of amino acids: Translated: 217; Mature: 216

Protein sequence:

>217_residues
MTLETTLVRDIAVTRPGATAVLRRHRIDFCCNGGLSLAEAAARRDVDLGAVARELEALTPEPRTTPEQPEALIEHILKRF
HEVHRREFPEAIRMARRVEAVHRANTDCPHGLADHLAQMSEDLESHQQKEERMLFPMMLAGGRGMTGLPIRRMLVEHEEV
GAQLERLAELTGEFEPPQGACTTWRALYQACRKLDEDLREHMHLENNVLFPQFARAL

Sequences:

>Translated_217_residues
MTLETTLVRDIAVTRPGATAVLRRHRIDFCCNGGLSLAEAAARRDVDLGAVARELEALTPEPRTTPEQPEALIEHILKRF
HEVHRREFPEAIRMARRVEAVHRANTDCPHGLADHLAQMSEDLESHQQKEERMLFPMMLAGGRGMTGLPIRRMLVEHEEV
GAQLERLAELTGEFEPPQGACTTWRALYQACRKLDEDLREHMHLENNVLFPQFARAL
>Mature_216_residues
TLETTLVRDIAVTRPGATAVLRRHRIDFCCNGGLSLAEAAARRDVDLGAVARELEALTPEPRTTPEQPEALIEHILKRFH
EVHRREFPEAIRMARRVEAVHRANTDCPHGLADHLAQMSEDLESHQQKEERMLFPMMLAGGRGMTGLPIRRMLVEHEEVG
AQLERLAELTGEFEPPQGACTTWRALYQACRKLDEDLREHMHLENNVLFPQFARAL

Specific function: Involved in anaerobic NO protection [H]

COG id: COG2846

COG function: function code D; Regulator of cell morphogenesis and NO signaling

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790654, Length=207, Percent_Identity=40.5797101449275, Blast_Score=165, Evalue=2e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007500
- InterPro:   IPR019903
- InterPro:   IPR012312 [H]

Pfam domain/function: PF01814 Hemerythrin; PF04405 ScdA_N [H]

EC number: NA

Molecular weight: Translated: 24681; Mature: 24549

Theoretical pI: Translated: 6.29; Mature: 6.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLETTLVRDIAVTRPGATAVLRRHRIDFCCNGGLSLAEAAARRDVDLGAVARELEALTP
CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHCCC
EPRTTPEQPEALIEHILKRFHEVHRREFPEAIRMARRVEAVHRANTDCPHGLADHLAQMS
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
EDLESHQQKEERMLFPMMLAGGRGMTGLPIRRMLVEHEEVGAQLERLAELTGEFEPPQGA
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
CTTWRALYQACRKLDEDLREHMHLENNVLFPQFARAL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCC
>Mature Secondary Structure 
TLETTLVRDIAVTRPGATAVLRRHRIDFCCNGGLSLAEAAARRDVDLGAVARELEALTP
CCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHCCC
EPRTTPEQPEALIEHILKRFHEVHRREFPEAIRMARRVEAVHRANTDCPHGLADHLAQMS
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
EDLESHQQKEERMLFPMMLAGGRGMTGLPIRRMLVEHEEVGAQLERLAELTGEFEPPQGA
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
CTTWRALYQACRKLDEDLREHMHLENNVLFPQFARAL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA