| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197104661
Identifier: 197104661
GI number: 197104661
Start: 1377555
End: 1378103
Strand: Direct
Name: 197104661
Synonym: PHZ_c1195
Alternate gene names: NA
Gene position: 1377555-1378103 (Clockwise)
Preceding gene: 197104660
Following gene: 197104662
Centisome position: 34.47
GC content: 71.4
Gene sequence:
>549_bases ATGCCGTCCGCCTTCTTCACGATCGGTCACTCGACGCGGCCGCTGCCGGACTTCGTCGACCTTCTGAGGGAGAACGGTGT CGACCTGGTCGCCGACGTGCGATCGATGCCGCGGTCGCGCACCAACCCGCAGTTCAACGAGGCGGACCTGCCCGCGGCGC TGGCGCCATGGCAGATCGGCTACGCGCACCTGGCCGAGCTCGGCGGCCTGCGGGCCAGGCAGCGGAGCATTGATCCGTCG TCCAACGGCTACTGGCGGGTGCGCAGCTTCCAGAACTACGCCGACTACGCCCTGACGCCCCCGTTCGCGGCCGGCCTGGG CCGCCTTCGTGACCTCGGCGCGCACCGCCGCTGCGCGATCATGTGCGCGGAAGCGGTCTGGTGGCGCTGCCATCGACGGA TCATCGCCGACTACCTGCTCGCGGCCGGCGAAGAGGTCCGGCACATCCTGGGGCCCGCGCACGTCGAGCTCGCCCATCTC ACGCCGGGCGCGGTCGTCCACGGCGACGGCCGCGTGACCTATCCGGCCGCCGATCCGTCGACGGGTTAG
Upstream 100 bases:
>100_bases AAGGCCGGCGAGGGGCGCCTCCCGAGGCTCCCGGATCGACGGCCCAGATCGCACGACGGCGATCTTGTCGCCGACGAACC TCCGGAGCGCCGTCCGCCTC
Downstream 100 bases:
>100_bases GCCGGCCCCGTCGACGACGCCCGCGTGCAGCCGAGGGCGCCCTCCGGGCCGGGCCGATCCGCGGCGGGTTTGTCCGGGCG CAAAGTACGCGCCCGGCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 182; Mature: 181
Protein sequence:
>182_residues MPSAFFTIGHSTRPLPDFVDLLRENGVDLVADVRSMPRSRTNPQFNEADLPAALAPWQIGYAHLAELGGLRARQRSIDPS SNGYWRVRSFQNYADYALTPPFAAGLGRLRDLGAHRRCAIMCAEAVWWRCHRRIIADYLLAAGEEVRHILGPAHVELAHL TPGAVVHGDGRVTYPAADPSTG
Sequences:
>Translated_182_residues MPSAFFTIGHSTRPLPDFVDLLRENGVDLVADVRSMPRSRTNPQFNEADLPAALAPWQIGYAHLAELGGLRARQRSIDPS SNGYWRVRSFQNYADYALTPPFAAGLGRLRDLGAHRRCAIMCAEAVWWRCHRRIIADYLLAAGEEVRHILGPAHVELAHL TPGAVVHGDGRVTYPAADPSTG >Mature_181_residues PSAFFTIGHSTRPLPDFVDLLRENGVDLVADVRSMPRSRTNPQFNEADLPAALAPWQIGYAHLAELGGLRARQRSIDPSS NGYWRVRSFQNYADYALTPPFAAGLGRLRDLGAHRRCAIMCAEAVWWRCHRRIIADYLLAAGEEVRHILGPAHVELAHLT PGAVVHGDGRVTYPAADPSTG
Specific function: Unknown
COG id: COG5483
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20049; Mature: 19918
Theoretical pI: Translated: 8.12; Mature: 8.12
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSAFFTIGHSTRPLPDFVDLLRENGVDLVADVRSMPRSRTNPQFNEADLPAALAPWQIG CCCCEEEECCCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHH YAHLAELGGLRARQRSIDPSSNGYWRVRSFQNYADYALTPPFAAGLGRLRDLGAHRRCAI HHHHHHHCCHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHH MCAEAVWWRCHRRIIADYLLAAGEEVRHILGPAHVELAHLTPGAVVHGDGRVTYPAADPS HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCEEEEECCCCEEEECCCEEEECCCCCC TG CC >Mature Secondary Structure PSAFFTIGHSTRPLPDFVDLLRENGVDLVADVRSMPRSRTNPQFNEADLPAALAPWQIG CCCEEEECCCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHH YAHLAELGGLRARQRSIDPSSNGYWRVRSFQNYADYALTPPFAAGLGRLRDLGAHRRCAI HHHHHHHCCHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHH MCAEAVWWRCHRRIIADYLLAAGEEVRHILGPAHVELAHLTPGAVVHGDGRVTYPAADPS HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCEEEEECCCCEEEECCCEEEECCCCCC TG CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA