| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197104644
Identifier: 197104644
GI number: 197104644
Start: 1352674
End: 1353456
Strand: Direct
Name: 197104644
Synonym: PHZ_c1178
Alternate gene names: NA
Gene position: 1352674-1353456 (Clockwise)
Preceding gene: 197104643
Following gene: 197104648
Centisome position: 33.85
GC content: 73.95
Gene sequence:
>783_bases ATGAGCCAAGCCGAAACCGCCGCCGAGATCCGCCCGGCCGCCACCATCCTCCTGCTGCGCGACGAGCCCTCGTTCGAGGT CCTGATGGTCAAGCGGCACCATCAGATCGACTTCGCCTCGGGCGCCCTGGTCTTCCCGGGCGGCAAGACCCATGCGGGCG ACCACGACCCGGCCTGGGCCGAACACGTGCGGGGCTGGGACGAGATCGAGCCCGAGCAGCGTCCGCTGCGCATCGCCGCG ATCCGCGAGGCGTTCGAGGAGGCGGGCATCCTGGTGGGCGAGCGCCGCGACGGCGCCCCGCTGACCGAGGTCTGCGACCT GGAGGTGCGCGAGGCGGTGGACGCCGGCCGGCTGCCGTTCCTGGACGTGGTGCGCGACCTCGGGGCGCGGCTGAGCCTCG ATGCGCTGACCGTCTTCGCCCGCTGGATCACCCCGCCGATCGTGCCGAAGCGGTTCGACACCTGGTTCTACGCGGCGCGG GCGCCCGAGGGCCAGCTCGCCGCCTGCGACGGACGGGAGACGGTGGACGCCGAATGGATCCCGCCCGGGGAGGCCCTGCG CCTGGCGCACGTGGGCGAGCGGACGGTGATCTTCCCGACGCGGATGAACCTGCAGCTCCTGGGCGAGGCGCGCAGCGCGG CCGACGCCGTGGCCAGAGCGGGCGGACGCGAACTCGTCACGGTGCTGCCGCGGGTGGAGAGCCGGCCGGAAGGGCGCGTG CTGGTGCTGCCGCCGAACGCCGGCTACGGCGAGGTGGCCGAGCCGCTCGAGCGGGTGATGTAG
Upstream 100 bases:
>100_bases CTGCTGGAGCGGATGAGCCGCGCCGCCGGGCAGGTGCGTGACGTGGCGGAAACCGCCTGAGCCGCTTGCCGGGCGCCGCG GCCGGGCCCAAGCTTGGCGC
Downstream 100 bases:
>100_bases CCGGAGCCTAGGCGCCGAGTTGGGCCACGCGGGACTCCAGCTCCTTCACCAGGGCCTGGCCCACAGGGTGGTCCTCGCCC TTGATGCCGTCGCGGACGGC
Product: hypothetical protein
Products: NA
Alternate protein names: Beta-Lactamase Domain-Containing Protein; NUDIX Family Protein; NUDIX Family Hydrolase; Beta-Lactamase-Like; Beta-Lactamase-Like Protein; Zinc-Dependent Hydrolase; Beta-Lactamase Domain Protein; NUDIX Domain-Containing Protein; Nudix Hydrolase; NUDIX HydrolaseBeta-Lactamase-Like
Number of amino acids: Translated: 260; Mature: 259
Protein sequence:
>260_residues MSQAETAAEIRPAATILLLRDEPSFEVLMVKRHHQIDFASGALVFPGGKTHAGDHDPAWAEHVRGWDEIEPEQRPLRIAA IREAFEEAGILVGERRDGAPLTEVCDLEVREAVDAGRLPFLDVVRDLGARLSLDALTVFARWITPPIVPKRFDTWFYAAR APEGQLAACDGRETVDAEWIPPGEALRLAHVGERTVIFPTRMNLQLLGEARSAADAVARAGGRELVTVLPRVESRPEGRV LVLPPNAGYGEVAEPLERVM
Sequences:
>Translated_260_residues MSQAETAAEIRPAATILLLRDEPSFEVLMVKRHHQIDFASGALVFPGGKTHAGDHDPAWAEHVRGWDEIEPEQRPLRIAA IREAFEEAGILVGERRDGAPLTEVCDLEVREAVDAGRLPFLDVVRDLGARLSLDALTVFARWITPPIVPKRFDTWFYAAR APEGQLAACDGRETVDAEWIPPGEALRLAHVGERTVIFPTRMNLQLLGEARSAADAVARAGGRELVTVLPRVESRPEGRV LVLPPNAGYGEVAEPLERVM >Mature_259_residues SQAETAAEIRPAATILLLRDEPSFEVLMVKRHHQIDFASGALVFPGGKTHAGDHDPAWAEHVRGWDEIEPEQRPLRIAAI REAFEEAGILVGERRDGAPLTEVCDLEVREAVDAGRLPFLDVVRDLGARLSLDALTVFARWITPPIVPKRFDTWFYAARA PEGQLAACDGRETVDAEWIPPGEALRLAHVGERTVIFPTRMNLQLLGEARSAADAVARAGGRELVTVLPRVESRPEGRVL VLPPNAGYGEVAEPLERVM
Specific function: Unknown
COG id: COG0494
COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28581; Mature: 28450
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQAETAAEIRPAATILLLRDEPSFEVLMVKRHHQIDFASGALVFPGGKTHAGDHDPAWA CCCHHHHHHCCCEEEEEEEECCCCEEEEEEECCCEEEECCCEEECCCCCCCCCCCCCHHH EHVRGWDEIEPEQRPLRIAAIREAFEEAGILVGERRDGAPLTEVCDLEVREAVDAGRLPF HHCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCHHHHHCHHHHHHHCCCCCCH LDVVRDLGARLSLDALTVFARWITPPIVPKRFDTWFYAARAPEGQLAACDGRETVDAEWI HHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCEEECCCCCCCCCCCC PPGEALRLAHVGERTVIFPTRMNLQLLGEARSAADAVARAGGRELVTVLPRVESRPEGRV CCCHHEEEEECCCEEEEEECCCCCEEHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCE LVLPPNAGYGEVAEPLERVM EEECCCCCCCHHHHHHHHCC >Mature Secondary Structure SQAETAAEIRPAATILLLRDEPSFEVLMVKRHHQIDFASGALVFPGGKTHAGDHDPAWA CCHHHHHHCCCEEEEEEEECCCCEEEEEEECCCEEEECCCEEECCCCCCCCCCCCCHHH EHVRGWDEIEPEQRPLRIAAIREAFEEAGILVGERRDGAPLTEVCDLEVREAVDAGRLPF HHCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCHHHHHCHHHHHHHCCCCCCH LDVVRDLGARLSLDALTVFARWITPPIVPKRFDTWFYAARAPEGQLAACDGRETVDAEWI HHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCEEECCCCCCCCCCCC PPGEALRLAHVGERTVIFPTRMNLQLLGEARSAADAVARAGGRELVTVLPRVESRPEGRV CCCHHEEEEECCCEEEEEECCCCCEEHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCE LVLPPNAGYGEVAEPLERVM EEECCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA