Definition Phenylobacterium zucineum HLK1, complete genome.
Accession NC_011144
Length 3,996,255

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The map label for this gene is 197104644

Identifier: 197104644

GI number: 197104644

Start: 1352674

End: 1353456

Strand: Direct

Name: 197104644

Synonym: PHZ_c1178

Alternate gene names: NA

Gene position: 1352674-1353456 (Clockwise)

Preceding gene: 197104643

Following gene: 197104648

Centisome position: 33.85

GC content: 73.95

Gene sequence:

>783_bases
ATGAGCCAAGCCGAAACCGCCGCCGAGATCCGCCCGGCCGCCACCATCCTCCTGCTGCGCGACGAGCCCTCGTTCGAGGT
CCTGATGGTCAAGCGGCACCATCAGATCGACTTCGCCTCGGGCGCCCTGGTCTTCCCGGGCGGCAAGACCCATGCGGGCG
ACCACGACCCGGCCTGGGCCGAACACGTGCGGGGCTGGGACGAGATCGAGCCCGAGCAGCGTCCGCTGCGCATCGCCGCG
ATCCGCGAGGCGTTCGAGGAGGCGGGCATCCTGGTGGGCGAGCGCCGCGACGGCGCCCCGCTGACCGAGGTCTGCGACCT
GGAGGTGCGCGAGGCGGTGGACGCCGGCCGGCTGCCGTTCCTGGACGTGGTGCGCGACCTCGGGGCGCGGCTGAGCCTCG
ATGCGCTGACCGTCTTCGCCCGCTGGATCACCCCGCCGATCGTGCCGAAGCGGTTCGACACCTGGTTCTACGCGGCGCGG
GCGCCCGAGGGCCAGCTCGCCGCCTGCGACGGACGGGAGACGGTGGACGCCGAATGGATCCCGCCCGGGGAGGCCCTGCG
CCTGGCGCACGTGGGCGAGCGGACGGTGATCTTCCCGACGCGGATGAACCTGCAGCTCCTGGGCGAGGCGCGCAGCGCGG
CCGACGCCGTGGCCAGAGCGGGCGGACGCGAACTCGTCACGGTGCTGCCGCGGGTGGAGAGCCGGCCGGAAGGGCGCGTG
CTGGTGCTGCCGCCGAACGCCGGCTACGGCGAGGTGGCCGAGCCGCTCGAGCGGGTGATGTAG

Upstream 100 bases:

>100_bases
CTGCTGGAGCGGATGAGCCGCGCCGCCGGGCAGGTGCGTGACGTGGCGGAAACCGCCTGAGCCGCTTGCCGGGCGCCGCG
GCCGGGCCCAAGCTTGGCGC

Downstream 100 bases:

>100_bases
CCGGAGCCTAGGCGCCGAGTTGGGCCACGCGGGACTCCAGCTCCTTCACCAGGGCCTGGCCCACAGGGTGGTCCTCGCCC
TTGATGCCGTCGCGGACGGC

Product: hypothetical protein

Products: NA

Alternate protein names: Beta-Lactamase Domain-Containing Protein; NUDIX Family Protein; NUDIX Family Hydrolase; Beta-Lactamase-Like; Beta-Lactamase-Like Protein; Zinc-Dependent Hydrolase; Beta-Lactamase Domain Protein; NUDIX Domain-Containing Protein; Nudix Hydrolase; NUDIX HydrolaseBeta-Lactamase-Like

Number of amino acids: Translated: 260; Mature: 259

Protein sequence:

>260_residues
MSQAETAAEIRPAATILLLRDEPSFEVLMVKRHHQIDFASGALVFPGGKTHAGDHDPAWAEHVRGWDEIEPEQRPLRIAA
IREAFEEAGILVGERRDGAPLTEVCDLEVREAVDAGRLPFLDVVRDLGARLSLDALTVFARWITPPIVPKRFDTWFYAAR
APEGQLAACDGRETVDAEWIPPGEALRLAHVGERTVIFPTRMNLQLLGEARSAADAVARAGGRELVTVLPRVESRPEGRV
LVLPPNAGYGEVAEPLERVM

Sequences:

>Translated_260_residues
MSQAETAAEIRPAATILLLRDEPSFEVLMVKRHHQIDFASGALVFPGGKTHAGDHDPAWAEHVRGWDEIEPEQRPLRIAA
IREAFEEAGILVGERRDGAPLTEVCDLEVREAVDAGRLPFLDVVRDLGARLSLDALTVFARWITPPIVPKRFDTWFYAAR
APEGQLAACDGRETVDAEWIPPGEALRLAHVGERTVIFPTRMNLQLLGEARSAADAVARAGGRELVTVLPRVESRPEGRV
LVLPPNAGYGEVAEPLERVM
>Mature_259_residues
SQAETAAEIRPAATILLLRDEPSFEVLMVKRHHQIDFASGALVFPGGKTHAGDHDPAWAEHVRGWDEIEPEQRPLRIAAI
REAFEEAGILVGERRDGAPLTEVCDLEVREAVDAGRLPFLDVVRDLGARLSLDALTVFARWITPPIVPKRFDTWFYAARA
PEGQLAACDGRETVDAEWIPPGEALRLAHVGERTVIFPTRMNLQLLGEARSAADAVARAGGRELVTVLPRVESRPEGRVL
VLPPNAGYGEVAEPLERVM

Specific function: Unknown

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28581; Mature: 28450

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQAETAAEIRPAATILLLRDEPSFEVLMVKRHHQIDFASGALVFPGGKTHAGDHDPAWA
CCCHHHHHHCCCEEEEEEEECCCCEEEEEEECCCEEEECCCEEECCCCCCCCCCCCCHHH
EHVRGWDEIEPEQRPLRIAAIREAFEEAGILVGERRDGAPLTEVCDLEVREAVDAGRLPF
HHCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCHHHHHCHHHHHHHCCCCCCH
LDVVRDLGARLSLDALTVFARWITPPIVPKRFDTWFYAARAPEGQLAACDGRETVDAEWI
HHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCEEECCCCCCCCCCCC
PPGEALRLAHVGERTVIFPTRMNLQLLGEARSAADAVARAGGRELVTVLPRVESRPEGRV
CCCHHEEEEECCCEEEEEECCCCCEEHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCE
LVLPPNAGYGEVAEPLERVM
EEECCCCCCCHHHHHHHHCC
>Mature Secondary Structure 
SQAETAAEIRPAATILLLRDEPSFEVLMVKRHHQIDFASGALVFPGGKTHAGDHDPAWA
CCHHHHHHCCCEEEEEEEECCCCEEEEEEECCCEEEECCCEEECCCCCCCCCCCCCHHH
EHVRGWDEIEPEQRPLRIAAIREAFEEAGILVGERRDGAPLTEVCDLEVREAVDAGRLPF
HHCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCHHHHHCHHHHHHHCCCCCCH
LDVVRDLGARLSLDALTVFARWITPPIVPKRFDTWFYAARAPEGQLAACDGRETVDAEWI
HHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCEEECCCCCCCCCCCC
PPGEALRLAHVGERTVIFPTRMNLQLLGEARSAADAVARAGGRELVTVLPRVESRPEGRV
CCCHHEEEEECCCEEEEEECCCCCEEHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCE
LVLPPNAGYGEVAEPLERVM
EEECCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA