| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is ppc [H]
Identifier: 197104620
GI number: 197104620
Start: 1323791
End: 1326487
Strand: Direct
Name: ppc [H]
Synonym: PHZ_c1154
Alternate gene names: 197104620
Gene position: 1323791-1326487 (Clockwise)
Preceding gene: 197104618
Following gene: 197104621
Centisome position: 33.13
GC content: 72.38
Gene sequence:
>2697_bases ATGACCCAGTCGGTTCCGGACCAGCTGCGCGCCGCCGTGCGCTTCCTCGGCCGCGTCCTGGGCGACGTGATCCGCGCCCA GGACGGGGTGGCGGTGTTCAACCAGATCGAGGACATCCGCCAGGCCTCGGTGGGCTTCCACCGCGAGGGCACGCCCGAGG CGGCGCGGCTGATGGCCGAGCGGCTCGGGTCGCTCAGCCTGGAGGACACGGTCCGTTTCGCCCACTCGTTCGCCTGTTTC CTGCAGATCACCAACATCGCCGAGGACCAGATCCAGCGCCGCCGAATCCGGGCCGGGGAGGCCCGCCCGGACACCCTGGC CGGCGCGGTCCGCGCGCTGGCGGCCGACGGCGTGGAGCGGAAGGAGGTCGAGGATCTCCTGGCCGGCGCCCTCATCGCCC CCGTGATCACCGCCCACCCGAGCGAGGTGCGCCGCAAGAGCGTGCTCGATCGGCAGAGCGCCATCGCCCGCGGGCTGGAG GCCTTCGACCGCGCCCGCACCGACGCCGAGCGGGAGGCCGCCGAGCAGGAGCTGGTCCGCGAGGTCTCGATCTTCTGGCG CACCCGGCTGCTGCGGCACGTGAAGATCGCGGTCGGCGACGAGATCGAGAACGCCGTCTCCTATTTCGAGCGCAGCTTCC TGGCGGCCCTGCCGAGGCTCTACGCGCGCTGGCGCCACGTGCTGGGGCAGGACGAGGCCCTGGCCAGCTTCCTGCGCGTC GGCTCGTGGGTCGGCGGCGACCGGGACGGCAATCCCTTCGTCACCGCCCAGGTGATGCGCCAGGCCCTGGCGCGCCAGTC GCGGGCGGCGCTCCGGCTCTACCTCGACCAGGTCCACGCCCTGGGCGCGGAACTCTCCATCTCGTCGGACCTCGCGGGCG TCACGCCCGAACTCCAGGCGCTGGCCGACAAGGCGCACGACGCCTCGCCGCACCGGACCGACGAGCCGTACCGGCGGGCG CTGACGGGCGTCTACGCGCGCCTGGCGGCCACCTATCCGCTGCTGACGGGAGAGGCGCCGCCGCGGCCCGCCAGCACTCC GGGCGAGCCCTACGAGGACCCGCAGACGTTGCGGGCCGACCTGCAGACCGTGCTGGATTCGCTCCTGCGGATGCATGGGG AGGCCTTCGCCGACGGGCCGCTGCCGGACCTCATCCGCGCGGTGGACGTGTTCGGCTTCCACCTGGCGACGCTCGACATG CGGCAGAACTCCGCCGTCCACGCCCGCGTGGCGGCCGAACTGCTGCGCACGGCGGGCGTCTGCGCCGACTACGAGGCCCT GGACGAGGCCGGCCGCTGCCAGCTGCTTCTGTCCGAGCTGCGGCACGGCCGGCTGCTCGCCTCGCCGTTCGCGACCTACA GCGAGGAGACCGCGCGCGAGCTGGAGATCCTGGCCACGGCCGCCGAGATCAAGCGGCGCTACGGGCCGGACTCGATCCGC GCCTACATCGTCTCGAACACCACCTCGGTGTCGGACCTTCTGGAGGTCTATCTGCTGCTGAAGGAGGTGGGCCTGTTCCG GCCCGGCGCCCCGCCGACGGCCGAGATCCTCGCCGAGCCGCTGTTCGAGACCATCGAGGACCTGCGCGCCGCGCCCAAGA CCATGGCGCGCTACCTGGCCCTGCCGCAGATCCACGACCTCCTCGCGGGGCACGGCCTGCAGGAGGTGATGATCGGCTAC TCCGACTCCAACAAGGACGGCAGCTACCTCACCTCCACCTGGGAGCTGCACAAGACCTCGCGGGCGCTGGCCTCGGTGGT GGGCGGGGCCGGCCTGCGGCTGCAGCTCTTCCACGGGCGCGGCGGGGCCGTGGGGCGCGGCGGCGGCTCCAGCTTCGAGG CCCTGGTGGCCCAGCCGCGGGGGACGGTCGGCGGCCGCATCCGCATCACCGAGCAGGGCGAGGTGGTGGCCAACAAGTAC GCCGACCCGGAACTCGCGGGGCAGAGTCTCGAGACCCTGACCGCCGGCGTCGTGCTGGCCTCGCTGCGCAGGCATGCGTC CGAGGATCTGGCGGCGCCGCAGACCAAGGCGATGGACGCGCTCGCCCGTCACGCCATGCAGGCCTACCGGAGCCTCGTCT ACGAGACGCCGGGTTTCGTGGACTACTTCTTCGCCGCCACCCCGATCGCCGAGATCGCCGACCTGAACATCGGCAGCCGG CCGACGTCGCGCCAGGCCAGCCGCAGCATCCAGGGGCTGCGGGCCATTCCCTGGGTGTTCTCATGGTCGCAGTCGCGGGC GATGCTGCCCGGCTGGTACGGCTTCGGCTCGGCGGTGGCGAACGGCGGCGTGCCGATGGCCCAGCTGCGCGAGCTCTTCG AGAGCTGGCCGTTCTTCGCCACCACCCTGGCCAACATGGAGATGGTCCTGGCCAAGGGCGACCTGGCCATCGCCGGCCGC TACGCGGGCCTGGTGGAGGATCAGGCCCTGGCCGAGACGGTGTTCGGGCAGATCCGCGCCGAGTGGGAGCGGACGACCGA GGCGCTGCTGGAGATCACCGGCCAGTCGGCGCTGCTGGAGCACAATCCCGACCTGGCGGCGGTGATCCGCTCGCGGCTGC CCTACATCGATCCCCTGAACCACCTGCAGATCGAGCTGATCCGCCGCCGCCGTTCAGGGGACGATCAGGAGGCCGTGCGC CAGGGCATCCACCTGACGATCAACGGCGTGGCGGCGGGCCTTCGGAACACCGGCTGA
Upstream 100 bases:
>100_bases ATGCGGGCGAGGGCCTCGGCGGGGGTCATGCCCCCTTATCGCCGACCGGCGGTCGCGAAACCAGATGACGCCTGCGCGGC GGGAGGCTTAAAGGCGAACC
Downstream 100 bases:
>100_bases TGAGCGAGAACCTCTACGACCTGCTGGCCGGCGGCTTTCCCGCCGACCGCTCGAAACCCTGCTTCCTGCTCGGCGACGGC AGCGCGATCAGCTACGGCGA
Product: phosphoenolpyruvate carboxylase
Products: NA
Alternate protein names: PEPC; PEPCase [H]
Number of amino acids: Translated: 898; Mature: 897
Protein sequence:
>898_residues MTQSVPDQLRAAVRFLGRVLGDVIRAQDGVAVFNQIEDIRQASVGFHREGTPEAARLMAERLGSLSLEDTVRFAHSFACF LQITNIAEDQIQRRRIRAGEARPDTLAGAVRALAADGVERKEVEDLLAGALIAPVITAHPSEVRRKSVLDRQSAIARGLE AFDRARTDAEREAAEQELVREVSIFWRTRLLRHVKIAVGDEIENAVSYFERSFLAALPRLYARWRHVLGQDEALASFLRV GSWVGGDRDGNPFVTAQVMRQALARQSRAALRLYLDQVHALGAELSISSDLAGVTPELQALADKAHDASPHRTDEPYRRA LTGVYARLAATYPLLTGEAPPRPASTPGEPYEDPQTLRADLQTVLDSLLRMHGEAFADGPLPDLIRAVDVFGFHLATLDM RQNSAVHARVAAELLRTAGVCADYEALDEAGRCQLLLSELRHGRLLASPFATYSEETARELEILATAAEIKRRYGPDSIR AYIVSNTTSVSDLLEVYLLLKEVGLFRPGAPPTAEILAEPLFETIEDLRAAPKTMARYLALPQIHDLLAGHGLQEVMIGY SDSNKDGSYLTSTWELHKTSRALASVVGGAGLRLQLFHGRGGAVGRGGGSSFEALVAQPRGTVGGRIRITEQGEVVANKY ADPELAGQSLETLTAGVVLASLRRHASEDLAAPQTKAMDALARHAMQAYRSLVYETPGFVDYFFAATPIAEIADLNIGSR PTSRQASRSIQGLRAIPWVFSWSQSRAMLPGWYGFGSAVANGGVPMAQLRELFESWPFFATTLANMEMVLAKGDLAIAGR YAGLVEDQALAETVFGQIRAEWERTTEALLEITGQSALLEHNPDLAAVIRSRLPYIDPLNHLQIELIRRRRSGDDQEAVR QGIHLTINGVAAGLRNTG
Sequences:
>Translated_898_residues MTQSVPDQLRAAVRFLGRVLGDVIRAQDGVAVFNQIEDIRQASVGFHREGTPEAARLMAERLGSLSLEDTVRFAHSFACF LQITNIAEDQIQRRRIRAGEARPDTLAGAVRALAADGVERKEVEDLLAGALIAPVITAHPSEVRRKSVLDRQSAIARGLE AFDRARTDAEREAAEQELVREVSIFWRTRLLRHVKIAVGDEIENAVSYFERSFLAALPRLYARWRHVLGQDEALASFLRV GSWVGGDRDGNPFVTAQVMRQALARQSRAALRLYLDQVHALGAELSISSDLAGVTPELQALADKAHDASPHRTDEPYRRA LTGVYARLAATYPLLTGEAPPRPASTPGEPYEDPQTLRADLQTVLDSLLRMHGEAFADGPLPDLIRAVDVFGFHLATLDM RQNSAVHARVAAELLRTAGVCADYEALDEAGRCQLLLSELRHGRLLASPFATYSEETARELEILATAAEIKRRYGPDSIR AYIVSNTTSVSDLLEVYLLLKEVGLFRPGAPPTAEILAEPLFETIEDLRAAPKTMARYLALPQIHDLLAGHGLQEVMIGY SDSNKDGSYLTSTWELHKTSRALASVVGGAGLRLQLFHGRGGAVGRGGGSSFEALVAQPRGTVGGRIRITEQGEVVANKY ADPELAGQSLETLTAGVVLASLRRHASEDLAAPQTKAMDALARHAMQAYRSLVYETPGFVDYFFAATPIAEIADLNIGSR PTSRQASRSIQGLRAIPWVFSWSQSRAMLPGWYGFGSAVANGGVPMAQLRELFESWPFFATTLANMEMVLAKGDLAIAGR YAGLVEDQALAETVFGQIRAEWERTTEALLEITGQSALLEHNPDLAAVIRSRLPYIDPLNHLQIELIRRRRSGDDQEAVR QGIHLTINGVAAGLRNTG >Mature_897_residues TQSVPDQLRAAVRFLGRVLGDVIRAQDGVAVFNQIEDIRQASVGFHREGTPEAARLMAERLGSLSLEDTVRFAHSFACFL QITNIAEDQIQRRRIRAGEARPDTLAGAVRALAADGVERKEVEDLLAGALIAPVITAHPSEVRRKSVLDRQSAIARGLEA FDRARTDAEREAAEQELVREVSIFWRTRLLRHVKIAVGDEIENAVSYFERSFLAALPRLYARWRHVLGQDEALASFLRVG SWVGGDRDGNPFVTAQVMRQALARQSRAALRLYLDQVHALGAELSISSDLAGVTPELQALADKAHDASPHRTDEPYRRAL TGVYARLAATYPLLTGEAPPRPASTPGEPYEDPQTLRADLQTVLDSLLRMHGEAFADGPLPDLIRAVDVFGFHLATLDMR QNSAVHARVAAELLRTAGVCADYEALDEAGRCQLLLSELRHGRLLASPFATYSEETARELEILATAAEIKRRYGPDSIRA YIVSNTTSVSDLLEVYLLLKEVGLFRPGAPPTAEILAEPLFETIEDLRAAPKTMARYLALPQIHDLLAGHGLQEVMIGYS DSNKDGSYLTSTWELHKTSRALASVVGGAGLRLQLFHGRGGAVGRGGGSSFEALVAQPRGTVGGRIRITEQGEVVANKYA DPELAGQSLETLTAGVVLASLRRHASEDLAAPQTKAMDALARHAMQAYRSLVYETPGFVDYFFAATPIAEIADLNIGSRP TSRQASRSIQGLRAIPWVFSWSQSRAMLPGWYGFGSAVANGGVPMAQLRELFESWPFFATTLANMEMVLAKGDLAIAGRY AGLVEDQALAETVFGQIRAEWERTTEALLEITGQSALLEHNPDLAAVIRSRLPYIDPLNHLQIELIRRRRSGDDQEAVRQ GIHLTINGVAAGLRNTG
Specific function: Through the carboxylation of phosphoenolpyruvate (PEP) it forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle [H]
COG id: COG2352
COG function: function code C; Phosphoenolpyruvate carboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PEPCase type 1 family [H]
Homologues:
Organism=Escherichia coli, GI1790393, Length=925, Percent_Identity=34.7027027027027, Blast_Score=402, Evalue=1e-113,
Paralogues:
None
Copy number: 3,500 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021135 - InterPro: IPR018129 - InterPro: IPR022805 - InterPro: IPR015813 [H]
Pfam domain/function: PF00311 PEPcase [H]
EC number: =4.1.1.31 [H]
Molecular weight: Translated: 98099; Mature: 97967
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQSVPDQLRAAVRFLGRVLGDVIRAQDGVAVFNQIEDIRQASVGFHREGTPEAARLMAE CCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH RLGSLSLEDTVRFAHSFACFLQITNIAEDQIQRRRIRAGEARPDTLAGAVRALAADGVER HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCH KEVEDLLAGALIAPVITAHPSEVRRKSVLDRQSAIARGLEAFDRARTDAEREAAEQELVR HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH EVSIFWRTRLLRHVKIAVGDEIENAVSYFERSFLAALPRLYARWRHVLGQDEALASFLRV HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH GSWVGGDRDGNPFVTAQVMRQALARQSRAALRLYLDQVHALGAELSISSDLAGVTPELQA HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH LADKAHDASPHRTDEPYRRALTGVYARLAATYPLLTGEAPPRPASTPGEPYEDPQTLRAD HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHH LQTVLDSLLRMHGEAFADGPLPDLIRAVDVFGFHLATLDMRQNSAVHARVAAELLRTAGV HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHCC CADYEALDEAGRCQLLLSELRHGRLLASPFATYSEETARELEILATAAEIKRRYGPDSIR CCCHHHHHCCCHHHHHHHHHHCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHE AYIVSNTTSVSDLLEVYLLLKEVGLFRPGAPPTAEILAEPLFETIEDLRAAPKTMARYLA EEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHC LPQIHDLLAGHGLQEVMIGYSDSNKDGSYLTSTWELHKTSRALASVVGGAGLRLQLFHGR CHHHHHHHHCCCHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCEEEEEECC GGAVGRGGGSSFEALVAQPRGTVGGRIRITEQGEVVANKYADPELAGQSLETLTAGVVLA CCCCCCCCCCCHHHHHHCCCCCCCCEEEEECCCCHHHHCCCCHHHCCHHHHHHHHHHHHH SLRRHASEDLAAPQTKAMDALARHAMQAYRSLVYETPGFVDYFFAATPIAEIADLNIGSR HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHCCCCCC PTSRQASRSIQGLRAIPWVFSWSQSRAMLPGWYGFGSAVANGGVPMAQLRELFESWPFFA CCHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHCCHHH TTLANMEMVLAKGDLAIAGRYAGLVEDQALAETVFGQIRAEWERTTEALLEITGQSALLE HHHHHHHHEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH HNPDLAAVIRSRLPYIDPLNHLQIELIRRRRSGDDQEAVRQGIHLTINGVAAGLRNTG CCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHCCCEEEEHHHHHHCCCCC >Mature Secondary Structure TQSVPDQLRAAVRFLGRVLGDVIRAQDGVAVFNQIEDIRQASVGFHREGTPEAARLMAE CCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH RLGSLSLEDTVRFAHSFACFLQITNIAEDQIQRRRIRAGEARPDTLAGAVRALAADGVER HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCH KEVEDLLAGALIAPVITAHPSEVRRKSVLDRQSAIARGLEAFDRARTDAEREAAEQELVR HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH EVSIFWRTRLLRHVKIAVGDEIENAVSYFERSFLAALPRLYARWRHVLGQDEALASFLRV HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH GSWVGGDRDGNPFVTAQVMRQALARQSRAALRLYLDQVHALGAELSISSDLAGVTPELQA HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH LADKAHDASPHRTDEPYRRALTGVYARLAATYPLLTGEAPPRPASTPGEPYEDPQTLRAD HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHH LQTVLDSLLRMHGEAFADGPLPDLIRAVDVFGFHLATLDMRQNSAVHARVAAELLRTAGV HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHCC CADYEALDEAGRCQLLLSELRHGRLLASPFATYSEETARELEILATAAEIKRRYGPDSIR CCCHHHHHCCCHHHHHHHHHHCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHE AYIVSNTTSVSDLLEVYLLLKEVGLFRPGAPPTAEILAEPLFETIEDLRAAPKTMARYLA EEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHC LPQIHDLLAGHGLQEVMIGYSDSNKDGSYLTSTWELHKTSRALASVVGGAGLRLQLFHGR CHHHHHHHHCCCHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCEEEEEECC GGAVGRGGGSSFEALVAQPRGTVGGRIRITEQGEVVANKYADPELAGQSLETLTAGVVLA CCCCCCCCCCCHHHHHHCCCCCCCCEEEEECCCCHHHHCCCCHHHCCHHHHHHHHHHHHH SLRRHASEDLAAPQTKAMDALARHAMQAYRSLVYETPGFVDYFFAATPIAEIADLNIGSR HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHCCCCCC PTSRQASRSIQGLRAIPWVFSWSQSRAMLPGWYGFGSAVANGGVPMAQLRELFESWPFFA CCHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHCCHHH TTLANMEMVLAKGDLAIAGRYAGLVEDQALAETVFGQIRAEWERTTEALLEITGQSALLE HHHHHHHHEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH HNPDLAAVIRSRLPYIDPLNHLQIELIRRRRSGDDQEAVRQGIHLTINGVAAGLRNTG CCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHCCCEEEEHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11823852 [H]