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The map label for this gene is 197104600

Identifier: 197104600

GI number: 197104600

Start: 1298634

End: 1299710

Strand: Reverse

Name: 197104600

Synonym: PHZ_c1134

Alternate gene names: NA

Gene position: 1299710-1298634 (Counterclockwise)

Preceding gene: 197104608

Following gene: 197104599

Centisome position: 32.52

GC content: 71.68

Gene sequence:

>1077_bases
ATGCCGAACGACGTCGCGGCCGCCGAACACATCGAGGAGGCCGGGCTCAGGTACGTGAGCGACGGCGATCCGGGCATCGC
GCGCAAGCCCGCGCGGGGCCACGGCTTCAACTACCTCGCGCCGAACGGCGAGCCGGTCACCGACGAGAAGACCCTGGATC
GCATCCGCGCGCTGGCCATCCCGCCGGCCTGGACCGACGTCTGGATCTGCCCCCGCGCCAACGGCCACATCCAGGCGGTG
GGCCGCGACCAGAAGGGCCGCAAGCAGTACCGCTATCACGCCCGCTGGCGCGAGGTGCGCGACAGCCACAAGTACGACCG
GGTGCTCGCCTTCGGCCGCGCCCTGCCCCGACTTCGGCGGCGGGTGGAGGAGGACCTGAAGCGTCCGGGCCTGCCGCGCG
AGAAGGTGCTGGCCGCCGTCATCCGGGTGATGGAGACCACCCTGATCCGGGTCGGAAACGAGGAATACGCCAAGCAGAAC
CGCAGCTTCGGCCTGACCACCCTGCGCGACCGGCATGTGAAGGTCGGCCGCGCCGGCGCCGTCTTCGAGTTCCGCGGCAA
GAGCGGCAAGGTCCACAAGACCGGCCTGAACGACCGCCGGCTCGCCCGTATCGTCAAGGCCTGCCAGGACCTGCCGGGCC
AGCGGCTGTTTCAGTACGTCGGCGACGACGGGCTGCAGCACGCGGTGGAGTCCGCCGACGTCAACGCCTACCTGCGCGAC
GCGCTGGGCGAGGACTTCTCGGCCAAGGACTTCCGCACCTGGGCCGGGACCGTCATGGCCGCCCGCGCGCTGATGGAGAC
GCCGGCCTGCGCCAGCGCCGCCGAAGCCAAGCGCAATGTCTCCACCTGCGTGAAGGCGGTGGCCGGCGTGCTGGGCAACA
CGGCCGCGGTGGCCCGCAGCGCCTACATCCACCCCGCGGTGCTCGAGGCCTATCAGGACGGCGCGCTGGAGGTGAAGGCC
TCGGGGAGCGACGAGCGGGCCTTCGAGCTGGCCGTCCTGCGGTTCCTGGAAGGCGTGCGCGACGACGACCCGCAGAAGAA
GACCGCCGCCGCGCGGGAGATGGCCCGCAAGGCCTGA

Upstream 100 bases:

>100_bases
GACGCTCCCCGTTAGGAACCTGCGCCGCGCATACCACGTTGCCGCGGGGCGCGTGGAGGGCCCAGGGCCCCGGTGAGCCA
CGCGGGGAGCGCCAGGGCAC

Downstream 100 bases:

>100_bases
CGTGGCGGCACGCTGGCGCGGGCTCGCCGACCGGCGTTACCCTTCCCGGCACAAGGCGCGGGGGGACACGCGCCGCCGGA
GGATATCCCATGTTCGGCCC

Product: DNA topoisomerase IB

Products: NA

Alternate protein names: DNA poisomerase I; DNA poisomerase Type I; DNA poisomerase IB; Type I poisomerase; DNA poisomerase I Protein; Poisomerase IB; Poisomerase IB-Like Protein; DNA poisomerase I-Like Protein; Viral-Like DNA poisomerase; DNA poisomerase ; Eukaryotic-Like DNA poisomerase I; DNA poisomerasei; -Like DNA poisomerase I; Type I DNA poisomerase

Number of amino acids: Translated: 358; Mature: 357

Protein sequence:

>358_residues
MPNDVAAAEHIEEAGLRYVSDGDPGIARKPARGHGFNYLAPNGEPVTDEKTLDRIRALAIPPAWTDVWICPRANGHIQAV
GRDQKGRKQYRYHARWREVRDSHKYDRVLAFGRALPRLRRRVEEDLKRPGLPREKVLAAVIRVMETTLIRVGNEEYAKQN
RSFGLTTLRDRHVKVGRAGAVFEFRGKSGKVHKTGLNDRRLARIVKACQDLPGQRLFQYVGDDGLQHAVESADVNAYLRD
ALGEDFSAKDFRTWAGTVMAARALMETPACASAAEAKRNVSTCVKAVAGVLGNTAAVARSAYIHPAVLEAYQDGALEVKA
SGSDERAFELAVLRFLEGVRDDDPQKKTAAAREMARKA

Sequences:

>Translated_358_residues
MPNDVAAAEHIEEAGLRYVSDGDPGIARKPARGHGFNYLAPNGEPVTDEKTLDRIRALAIPPAWTDVWICPRANGHIQAV
GRDQKGRKQYRYHARWREVRDSHKYDRVLAFGRALPRLRRRVEEDLKRPGLPREKVLAAVIRVMETTLIRVGNEEYAKQN
RSFGLTTLRDRHVKVGRAGAVFEFRGKSGKVHKTGLNDRRLARIVKACQDLPGQRLFQYVGDDGLQHAVESADVNAYLRD
ALGEDFSAKDFRTWAGTVMAARALMETPACASAAEAKRNVSTCVKAVAGVLGNTAAVARSAYIHPAVLEAYQDGALEVKA
SGSDERAFELAVLRFLEGVRDDDPQKKTAAAREMARKA
>Mature_357_residues
PNDVAAAEHIEEAGLRYVSDGDPGIARKPARGHGFNYLAPNGEPVTDEKTLDRIRALAIPPAWTDVWICPRANGHIQAVG
RDQKGRKQYRYHARWREVRDSHKYDRVLAFGRALPRLRRRVEEDLKRPGLPREKVLAAVIRVMETTLIRVGNEEYAKQNR
SFGLTTLRDRHVKVGRAGAVFEFRGKSGKVHKTGLNDRRLARIVKACQDLPGQRLFQYVGDDGLQHAVESADVNAYLRDA
LGEDFSAKDFRTWAGTVMAARALMETPACASAAEAKRNVSTCVKAVAGVLGNTAAVARSAYIHPAVLEAYQDGALEVKAS
GSDERAFELAVLRFLEGVRDDDPQKKTAAAREMARKA

Specific function: Unknown

COG id: COG3569

COG function: function code L; Topoisomerase IB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39646; Mature: 39515

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNDVAAAEHIEEAGLRYVSDGDPGIARKPARGHGFNYLAPNGEPVTDEKTLDRIRALAI
CCCCHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHCC
PPAWTDVWICPRANGHIQAVGRDQKGRKQYRYHARWREVRDSHKYDRVLAFGRALPRLRR
CCCCCCEEEECCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RVEEDLKRPGLPREKVLAAVIRVMETTLIRVGNEEYAKQNRSFGLTTLRDRHVKVGRAGA
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCHHHHCCEEECCCCC
VFEFRGKSGKVHKTGLNDRRLARIVKACQDLPGQRLFQYVGDDGLQHAVESADVNAYLRD
EEEECCCCCCEECCCCCHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHH
ALGEDFSAKDFRTWAGTVMAARALMETPACASAAEAKRNVSTCVKAVAGVLGNTAAVARS
HHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
AYIHPAVLEAYQDGALEVKASGSDERAFELAVLRFLEGVRDDDPQKKTAAAREMARKA
HHCCHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
PNDVAAAEHIEEAGLRYVSDGDPGIARKPARGHGFNYLAPNGEPVTDEKTLDRIRALAI
CCCHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHCC
PPAWTDVWICPRANGHIQAVGRDQKGRKQYRYHARWREVRDSHKYDRVLAFGRALPRLRR
CCCCCCEEEECCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RVEEDLKRPGLPREKVLAAVIRVMETTLIRVGNEEYAKQNRSFGLTTLRDRHVKVGRAGA
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCHHHHCCEEECCCCC
VFEFRGKSGKVHKTGLNDRRLARIVKACQDLPGQRLFQYVGDDGLQHAVESADVNAYLRD
EEEECCCCCCEECCCCCHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHH
ALGEDFSAKDFRTWAGTVMAARALMETPACASAAEAKRNVSTCVKAVAGVLGNTAAVARS
HHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
AYIHPAVLEAYQDGALEVKASGSDERAFELAVLRFLEGVRDDDPQKKTAAAREMARKA
HHCCHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA