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The map label for this gene is 197104588

Identifier: 197104588

GI number: 197104588

Start: 1285331

End: 1285696

Strand: Direct

Name: 197104588

Synonym: PHZ_c1122

Alternate gene names: NA

Gene position: 1285331-1285696 (Clockwise)

Preceding gene: 197104587

Following gene: 197104589

Centisome position: 32.16

GC content: 73.77

Gene sequence:

>366_bases
GTGCTGGCGGCAAGCCTCGCTCTGATGCTGGCCGCCTCGGCGCCCTCGGCCGCCGAGGGCGCGCGGGTGTTCCAGCGCTG
CTTCTCCTGCCATTCGGTGGACCCCGCCGAGGGCCATGTGCAGGGGCCGAACCTGGCCGGGATCGTGGGGCGCCGAGCGG
GCACGCGGCCCGGCTATTCCTATTCGCCGGCCTTGCGGCGGGCGCGGGCGGGCGGGCTCGTCTGGACCGAGCAGGCGCTG
GACCACTTCCTGGCCGACCCCGAGGCGATGATCCCGGGCACCGAGATGAGCATGCCGCCCCTTCGCAAACCGCGTGACCG
CCAGGCGGTGATCCGCTTCCTCCAGACCACGGCGAGCCCCCGATGA

Upstream 100 bases:

>100_bases
ACCGGCCGGGCGCGAACGTGCGCCAGATGCTGGGCCGCCCGGGCGAGGCCTGGGGGGCGGAGTCCGGGACCGACCGCCTC
GTCGTGATCCGGTACTAGGC

Downstream 100 bases:

>100_bases
TCGAACTCTGGCACTGCCCCGACGCCCGCTCGTTCCGGCCGCTCTGGGCCCTGGAGGAGCTGGACCTGCCGTACGAGCTG
CACCTGCTGCCGTTCCCGCC

Product: cytochrome c family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 121; Mature: 121

Protein sequence:

>121_residues
MLAASLALMLAASAPSAAEGARVFQRCFSCHSVDPAEGHVQGPNLAGIVGRRAGTRPGYSYSPALRRARAGGLVWTEQAL
DHFLADPEAMIPGTEMSMPPLRKPRDRQAVIRFLQTTASPR

Sequences:

>Translated_121_residues
MLAASLALMLAASAPSAAEGARVFQRCFSCHSVDPAEGHVQGPNLAGIVGRRAGTRPGYSYSPALRRARAGGLVWTEQAL
DHFLADPEAMIPGTEMSMPPLRKPRDRQAVIRFLQTTASPR
>Mature_121_residues
MLAASLALMLAASAPSAAEGARVFQRCFSCHSVDPAEGHVQGPNLAGIVGRRAGTRPGYSYSPALRRARAGGLVWTEQAL
DHFLADPEAMIPGTEMSMPPLRKPRDRQAVIRFLQTTASPR

Specific function: Cytochrome c2 is found mainly in purple, non-sulfur, photosynthetic bacteria where it functions as the electron donor to the oxidized bacteriochlorophyll in the photophosphorylation pathway. However, it may also have a role in the respiratory chain and is

COG id: COG3474

COG function: function code C; Cytochrome c2

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cytochrome c domain [H]

Homologues:

Organism=Homo sapiens, GI11128019, Length=105, Percent_Identity=34.2857142857143, Blast_Score=84, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17566554, Length=104, Percent_Identity=37.5, Blast_Score=83, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI17539604, Length=103, Percent_Identity=36.8932038834951, Blast_Score=80, Evalue=2e-16,
Organism=Saccharomyces cerevisiae, GI6322508, Length=108, Percent_Identity=38.8888888888889, Blast_Score=90, Evalue=1e-19,
Organism=Saccharomyces cerevisiae, GI6320796, Length=104, Percent_Identity=36.5384615384615, Blast_Score=81, Evalue=5e-17,
Organism=Drosophila melanogaster, GI17137204, Length=103, Percent_Identity=40.7766990291262, Blast_Score=93, Evalue=3e-20,
Organism=Drosophila melanogaster, GI17137228, Length=104, Percent_Identity=37.5, Blast_Score=86, Evalue=4e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002327
- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 12941; Mature: 12941

Theoretical pI: Translated: 10.58; Mature: 10.58

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAASLALMLAASAPSAAEGARVFQRCFSCHSVDPAEGHVQGPNLAGIVGRRAGTRPGYS
CCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCCCC
YSPALRRARAGGLVWTEQALDHFLADPEAMIPGTEMSMPPLRKPRDRQAVIRFLQTTASP
CCHHHHHHHCCCCEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC
R
C
>Mature Secondary Structure
MLAASLALMLAASAPSAAEGARVFQRCFSCHSVDPAEGHVQGPNLAGIVGRRAGTRPGYS
CCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCCCC
YSPALRRARAGGLVWTEQALDHFLADPEAMIPGTEMSMPPLRKPRDRQAVIRFLQTTASP
CCHHHHHHHCCCCEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC
R
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 174109 [H]