| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is cysW [H]
Identifier: 197104569
GI number: 197104569
Start: 1253915
End: 1254754
Strand: Direct
Name: cysW [H]
Synonym: PHZ_c1103
Alternate gene names: 197104569
Gene position: 1253915-1254754 (Clockwise)
Preceding gene: 197104568
Following gene: 197104570
Centisome position: 31.38
GC content: 69.52
Gene sequence:
>840_bases ATGACGGGGTCGCGAATCCGACTGCCGGGCCTTGCGCCCCTGTTCCTCGCGCTCGCCCTGGCCGTCCTCGGGGTGCTGAT CGTCCTGCCGCTGGGCGTGGTGTTCCAGCAGGCGCTCTCCAAGGGACTGGGCGCCTACATCGAGCCGCTCCGGCAGCCCG ACGCCCTGGCGGCGATCCGGCTGACGCTGACGGTGGCCGCCATCTCGGTCCCGCTGAACGCGGTGTTCGGCGTGGCCGCC GCCTGGGCGATCGCCCGCTTCGAGTTCCGGGGCAAGAGCCTGCTCGTCACCTTCATCGACCTGCCGTTCTCGATGTCGCC GGTGGTCTCGGGCCTGGTCTGGGTGCTGCTGTTCGGGGCCCAGGGCTGGTTCGGCGAGATCCTGCTGCAACACGACGTCA GGATCATCTTCGCGACGTCGGGCCTCGTCCTGGCCACGGTGCTGGTCACGCTGCCGTTCGTCGCCCGCGAGCTCATCCCG CTGATGCAGGGGCAGGGCTCGGACGAGGAGGCGGCGGCGCTGACCCTGGGGGCCGGCGGCTGGACCACGTTCTGGCGGGT CACCCTGCCCAACATCCGCTGGGCGCTGCTGTACGGCGTCCTGCTCTGCAACGCCCGCGCGATGGGCGAGTTCGGCGCGG TCTCGGTGGTCTCGGGCAGCATCCGGGGCCTGACCACCACTTTGCCGCTCCACGTCGAGGTGCTCTACAATGACTACGAA TTCGTCGGCGCTTTCGCGGCGGCCTCCATCCTCGCGGGCCTCGGGCTCGTCACCCTCGTCCTCAAGACGGTCCTCGAATG GCGACATGCCGGTGAACTTGCCGCAAGCTGCAAACACTGA
Upstream 100 bases:
>100_bases CCGGCGCGGCGGCCATCGGCCTGGCCATGCTGGTCATCTCGTTCGGGGCCCTCCTGGCGGTGAACGCCGCCCAGATGGCG ACGGCGGGGCGGGGGCGCGC
Downstream 100 bases:
>100_bases CGGGGCCGCGCTGGAGATCCGCGGGGTCTCCAAGACGTTCGGCCGCTTCCCGGCGCTGCGGGACGTCTCGCTGCGGGCGC GGGACAAGGAGTTCCTGGCG
Product: sulfate ABC transporter,permease protein
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 279; Mature: 278
Protein sequence:
>279_residues MTGSRIRLPGLAPLFLALALAVLGVLIVLPLGVVFQQALSKGLGAYIEPLRQPDALAAIRLTLTVAAISVPLNAVFGVAA AWAIARFEFRGKSLLVTFIDLPFSMSPVVSGLVWVLLFGAQGWFGEILLQHDVRIIFATSGLVLATVLVTLPFVARELIP LMQGQGSDEEAAALTLGAGGWTTFWRVTLPNIRWALLYGVLLCNARAMGEFGAVSVVSGSIRGLTTTLPLHVEVLYNDYE FVGAFAAASILAGLGLVTLVLKTVLEWRHAGELAASCKH
Sequences:
>Translated_279_residues MTGSRIRLPGLAPLFLALALAVLGVLIVLPLGVVFQQALSKGLGAYIEPLRQPDALAAIRLTLTVAAISVPLNAVFGVAA AWAIARFEFRGKSLLVTFIDLPFSMSPVVSGLVWVLLFGAQGWFGEILLQHDVRIIFATSGLVLATVLVTLPFVARELIP LMQGQGSDEEAAALTLGAGGWTTFWRVTLPNIRWALLYGVLLCNARAMGEFGAVSVVSGSIRGLTTTLPLHVEVLYNDYE FVGAFAAASILAGLGLVTLVLKTVLEWRHAGELAASCKH >Mature_278_residues TGSRIRLPGLAPLFLALALAVLGVLIVLPLGVVFQQALSKGLGAYIEPLRQPDALAAIRLTLTVAAISVPLNAVFGVAAA WAIARFEFRGKSLLVTFIDLPFSMSPVVSGLVWVLLFGAQGWFGEILLQHDVRIIFATSGLVLATVLVTLPFVARELIPL MQGQGSDEEAAALTLGAGGWTTFWRVTLPNIRWALLYGVLLCNARAMGEFGAVSVVSGSIRGLTTTLPLHVEVLYNDYEF VGAFAAASILAGLGLVTLVLKTVLEWRHAGELAASCKH
Specific function: Part of the ABC transporter complex CysAWTP (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4208
COG function: function code P; ABC-type sulfate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI87082099, Length=253, Percent_Identity=52.9644268774704, Blast_Score=270, Evalue=6e-74, Organism=Escherichia coli, GI1788764, Length=206, Percent_Identity=35.9223300970874, Blast_Score=137, Evalue=1e-33, Organism=Escherichia coli, GI1786980, Length=173, Percent_Identity=35.2601156069364, Blast_Score=80, Evalue=1e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011866 - InterPro: IPR005667 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 29630; Mature: 29498
Theoretical pI: Translated: 8.23; Mature: 8.23
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGSRIRLPGLAPLFLALALAVLGVLIVLPLGVVFQQALSKGLGAYIEPLRQPDALAAIR CCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHHHHHHH LTLTVAAISVPLNAVFGVAAAWAIARFEFRGKSLLVTFIDLPFSMSPVVSGLVWVLLFGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCC QGWFGEILLQHDVRIIFATSGLVLATVLVTLPFVARELIPLMQGQGSDEEAAALTLGAGG CCHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCC WTTFWRVTLPNIRWALLYGVLLCNARAMGEFGAVSVVSGSIRGLTTTLPLHVEVLYNDYE CEEEEEEECCCHHHHHHHHHHHHCCHHCCCCCCHHEECCCCCCEEEECCEEEEEEECCHH FVGAFAAASILAGLGLVTLVLKTVLEWRHAGELAASCKH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TGSRIRLPGLAPLFLALALAVLGVLIVLPLGVVFQQALSKGLGAYIEPLRQPDALAAIR CCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHHHHHHH LTLTVAAISVPLNAVFGVAAAWAIARFEFRGKSLLVTFIDLPFSMSPVVSGLVWVLLFGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCC QGWFGEILLQHDVRIIFATSGLVLATVLVTLPFVARELIPLMQGQGSDEEAAALTLGAGG CCHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCC WTTFWRVTLPNIRWALLYGVLLCNARAMGEFGAVSVVSGSIRGLTTTLPLHVEVLYNDYE CEEEEEEECCCHHHHHHHHHHHHCCHHCCCCCCHHEECCCCCCEEEECCEEEEEEECCHH FVGAFAAASILAGLGLVTLVLKTVLEWRHAGELAASCKH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1708375 [H]