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The map label for this gene is nagJ [H]

Identifier: 197104527

GI number: 197104527

Start: 1196387

End: 1197385

Strand: Reverse

Name: nagJ [H]

Synonym: PHZ_c1061

Alternate gene names: 197104527

Gene position: 1197385-1196387 (Counterclockwise)

Preceding gene: 197104530

Following gene: 197104526

Centisome position: 29.96

GC content: 73.37

Gene sequence:

>999_bases
ATGGTCCGGACCCTGGGGCCGGCGGGCTACGGCTTCTATCTCTACGCGCCCAAGGCCGACGCCTTCCTGCGCAAGCGCTG
GCGCGAGCCCTGTCCCGACGCCGAACTGGAGCGCCTGGCCGCCTTCGCCGCCGCCTGCCGGGGCGCCGGCGTCCGCTTCG
GCGTGGGCCTCTCGCCTTACGAGCTCTACCGCGACTTCGACGCCGCCGCGAAGGCCGACCTCGCCGCCAAGCTCGACCAG
CTCGCCTCGCTCGGCCTGGACGACCTCGGCGTCTTCTTCGACGACATGCGCGGCGACCTGCCCGATCTCGCCGCCCGTCA
GATCGAGATCGTCCACTGGATCGCCGGGCGCGTCCCGCAGGCCCGCATCGCCGCCTGCCCCAGCTACTACAGCGACGATC
CGGTGCTCGACCGCGTGTTCGGCCAGCGCCCGCCGGACTATCTGGAGGATCTCGGCGCCGGGCTCGATCCGGCGATCCGC
CTGATGTGGACCGGCGAGGAGGTCTGCTCCCTGCAGGTCACCCCCGCCCACCTCGACCGCGTCGCCGGGCAGATGCGCCG
CAAGCCGTTCCTGTGGGACAACTATCCGGTCAACGACGGCCCGCGCATGAGCCGGCGGCTGCACCTGCGCGCCTTCACCG
GCCGGCCGGCGGCCATCGGCTCCCGGCTCGCCGCCCACGGGATCAACCCCGCGTCCCAGGCGGTGCTCAGCCGCATCCCC
GCCCTGACCCTCGTGGACAGCTACCGCCAGGGCGAGGCCTACGAATACGCCGCCAGCTTCCGCCGGGCGGCCGTGCAGGT
GCTGGGCGAGGACTTCGCCGCCCTCGTGGGGCGCAACCTGCTGGCCCTGCAGGAGTCCGGCCTCGACGGCATGACCGACG
ACCACAAGGCCCGCCTGCGCGAGCGCCTCGCCGTCTTCGACCACCCCGCCGCGCGCGAGATCGAGGCCTGGCTGGACGGC
GCCTATGCCCTCGGCGCCGACGAGCTGCAGACCCAGTAG

Upstream 100 bases:

>100_bases
AGCGTCCTAGCAACCGCTCGCTTAAGGTCCGGGCGTGACCGAGCTGGGAATCATCGAGGGCTTCTTCGGCCGCCCCTATT
CGTGGGCCGAGCGGGCCGAC

Downstream 100 bases:

>100_bases
CGCGCCCTGTTTCCGCCCCGCCCTTGCGGCTAGAGAAGGGGCGTGATCTCCCGCCGCGCCCTCGTCTCGCGTCTTGGCCT
GCTCGCCGCGGGCGGGGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: Beta-N-acetylhexosaminidase; Beta-hexosaminidase; GH84; Hexosaminidase B; N-acetyl-beta-glucosaminidase [H]

Number of amino acids: Translated: 332; Mature: 332

Protein sequence:

>332_residues
MVRTLGPAGYGFYLYAPKADAFLRKRWREPCPDAELERLAAFAAACRGAGVRFGVGLSPYELYRDFDAAAKADLAAKLDQ
LASLGLDDLGVFFDDMRGDLPDLAARQIEIVHWIAGRVPQARIAACPSYYSDDPVLDRVFGQRPPDYLEDLGAGLDPAIR
LMWTGEEVCSLQVTPAHLDRVAGQMRRKPFLWDNYPVNDGPRMSRRLHLRAFTGRPAAIGSRLAAHGINPASQAVLSRIP
ALTLVDSYRQGEAYEYAASFRRAAVQVLGEDFAALVGRNLLALQESGLDGMTDDHKARLRERLAVFDHPAAREIEAWLDG
AYALGADELQTQ

Sequences:

>Translated_332_residues
MVRTLGPAGYGFYLYAPKADAFLRKRWREPCPDAELERLAAFAAACRGAGVRFGVGLSPYELYRDFDAAAKADLAAKLDQ
LASLGLDDLGVFFDDMRGDLPDLAARQIEIVHWIAGRVPQARIAACPSYYSDDPVLDRVFGQRPPDYLEDLGAGLDPAIR
LMWTGEEVCSLQVTPAHLDRVAGQMRRKPFLWDNYPVNDGPRMSRRLHLRAFTGRPAAIGSRLAAHGINPASQAVLSRIP
ALTLVDSYRQGEAYEYAASFRRAAVQVLGEDFAALVGRNLLALQESGLDGMTDDHKARLRERLAVFDHPAAREIEAWLDG
AYALGADELQTQ
>Mature_332_residues
MVRTLGPAGYGFYLYAPKADAFLRKRWREPCPDAELERLAAFAAACRGAGVRFGVGLSPYELYRDFDAAAKADLAAKLDQ
LASLGLDDLGVFFDDMRGDLPDLAARQIEIVHWIAGRVPQARIAACPSYYSDDPVLDRVFGQRPPDYLEDLGAGLDPAIR
LMWTGEEVCSLQVTPAHLDRVAGQMRRKPFLWDNYPVNDGPRMSRRLHLRAFTGRPAAIGSRLAAHGINPASQAVLSRIP
ALTLVDSYRQGEAYEYAASFRRAAVQVLGEDFAALVGRNLLALQESGLDGMTDDHKARLRERLAVFDHPAAREIEAWLDG
AYALGADELQTQ

Specific function: Biological function unknown. Capable of hydrolyzing the glycosidic link of O-GlcNAcylated proteins [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 fibronectin type-III domain [H]

Homologues:

Organism=Homo sapiens, GI215490056, Length=260, Percent_Identity=27.3076923076923, Blast_Score=93, Evalue=4e-19,
Organism=Homo sapiens, GI11024698, Length=260, Percent_Identity=27.3076923076923, Blast_Score=93, Evalue=4e-19,
Organism=Caenorhabditis elegans, GI193211002, Length=230, Percent_Identity=32.1739130434783, Blast_Score=109, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI193211004, Length=230, Percent_Identity=32.1739130434783, Blast_Score=109, Evalue=2e-24,
Organism=Drosophila melanogaster, GI24648670, Length=237, Percent_Identity=27.4261603375527, Blast_Score=99, Evalue=5e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015882
- InterPro:   IPR011496
- InterPro:   IPR008965
- InterPro:   IPR000421
- InterPro:   IPR018452
- InterPro:   IPR008957
- InterPro:   IPR003961
- InterPro:   IPR008979
- InterPro:   IPR017853
- InterPro:   IPR013783 [H]

Pfam domain/function: PF00754 F5_F8_type_C; PF00041 fn3; PF02838 Glyco_hydro_20b; PF07555 NAGidase [H]

EC number: =3.2.1.52 [H]

Molecular weight: Translated: 36588; Mature: 36588

Theoretical pI: Translated: 5.71; Mature: 5.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRTLGPAGYGFYLYAPKADAFLRKRWREPCPDAELERLAAFAAACRGAGVRFGVGLSPY
CCCCCCCCCCEEEEECCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEECCCCCHH
ELYRDFDAAAKADLAAKLDQLASLGLDDLGVFFDDMRGDLPDLAARQIEIVHWIAGRVPQ
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCH
ARIAACPSYYSDDPVLDRVFGQRPPDYLEDLGAGLDPAIRLMWTGEEVCSLQVTPAHLDR
HHHHHCCCCCCCCHHHHHHHCCCCHHHHHHHCCCCCCCEEEEECCHHHEEEECCHHHHHH
VAGQMRRKPFLWDNYPVNDGPRMSRRLHLRAFTGRPAAIGSRLAAHGINPASQAVLSRIP
HHHHHHCCCCCCCCCCCCCCCHHHHEEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHCC
ALTLVDSYRQGEAYEYAASFRRAAVQVLGEDFAALVGRNLLALQESGLDGMTDDHKARLR
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCHHHHHHH
ERLAVFDHPAAREIEAWLDGAYALGADELQTQ
HHHHHHCCCHHHHHHHHHCCHHHCCCHHHCCC
>Mature Secondary Structure
MVRTLGPAGYGFYLYAPKADAFLRKRWREPCPDAELERLAAFAAACRGAGVRFGVGLSPY
CCCCCCCCCCEEEEECCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEECCCCCHH
ELYRDFDAAAKADLAAKLDQLASLGLDDLGVFFDDMRGDLPDLAARQIEIVHWIAGRVPQ
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCH
ARIAACPSYYSDDPVLDRVFGQRPPDYLEDLGAGLDPAIRLMWTGEEVCSLQVTPAHLDR
HHHHHCCCCCCCCHHHHHHHCCCCHHHHHHHCCCCCCCEEEEECCHHHEEEECCHHHHHH
VAGQMRRKPFLWDNYPVNDGPRMSRRLHLRAFTGRPAAIGSRLAAHGINPASQAVLSRIP
HHHHHHCCCCCCCCCCCCCCCHHHHEEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHCC
ALTLVDSYRQGEAYEYAASFRRAAVQVLGEDFAALVGRNLLALQESGLDGMTDDHKARLR
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCHHHHHHH
ERLAVFDHPAAREIEAWLDGAYALGADELQTQ
HHHHHHCCCHHHHHHHHHCCHHHCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA